RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 IGLC1P0CG04 106 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 NPY1RP25929 384 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 CRYBB3P26998 211 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 DEFB131AP59861 70 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 TNFRSF9Q07011 255 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 PMS2P11Q13670 270 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 SMCO1Q147U7 214 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 RBMS2Q15434 407 aaKnown RBP12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 ZNF79Q15937 498 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 LEMD1Q68G75 181 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 CSTL1Q9H114 145 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 TMEM231Q9H6L2 316 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 SHPKQ9UHJ6 478 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 RABAC1Q9UI14 185 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 LYSTQ99698 3801 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 IFNA10P01566 189 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 SLC25A4P12235 298 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 OR10J1P30954 320 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 FAUP35544 74 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 P2RY1P47900 373 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 CCR6P51684 374 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 LGI3Q8N145 548 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 TOMM5Q8N4H5 51 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 STXBP6Q8NFX7 210 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 OR1S2Q8NGQ3 325 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 NPIPB3Q92617 1050 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 ACY3Q96HD9 319 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 RBKSQ9H477 322 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 HSPB7Q9UBY9 170 aa12.1□□□□□ -0.47
NCKIPSD-208ENST00000454134 A0A1W2PS18 150 aa12.09□□□□□ -0.47
NCKIPSD-208ENST00000454134 CXorf65A6NEN9 183 aa12.09□□□□□ -0.47
NCKIPSD-208ENST00000454134 MPTX1A8MV57 137 aa12.09□□□□□ -0.47
NCKIPSD-208ENST00000454134 JTBO76095 146 aa12.09□□□□□ -0.47
NCKIPSD-208ENST00000454134 ANXA3P12429 323 aa12.09□□□□□ -0.47
NCKIPSD-208ENST00000454134 S100A5P33763 92 aa12.09□□□□□ -0.47
NCKIPSD-208ENST00000454134 AP3S2P59780 193 aa12.09□□□□□ -0.47
NCKIPSD-208ENST00000454134 DTD1Q8TEA8 209 aa12.09□□□□□ -0.47
NCKIPSD-208ENST00000454134 Q8WTZ3 238 aa12.09□□□□□ -0.47
NCKIPSD-208ENST00000454134 RBM38Q9H0Z9 239 aaKnown RBP12.09□□□□□ -0.47
NCKIPSD-208ENST00000454134 TRAV2A0A0B4J234 112 aa12.08□□□□□ -0.48
NCKIPSD-208ENST00000454134 SRPXP78539 464 aa12.08□□□□□ -0.48
NCKIPSD-208ENST00000454134 OR1S1Q8NH92 325 aa12.08□□□□□ -0.48
NCKIPSD-208ENST00000454134 NARS2Q96I59 477 aaKnown RBP12.08□□□□□ -0.48
NCKIPSD-208ENST00000454134 CACFD1Q9UGQ2 172 aa12.08□□□□□ -0.48
NCKIPSD-208ENST00000454134 K7EQG2 157 aa12.07□□□□□ -0.48
NCKIPSD-208ENST00000454134 VAMP1P23763 118 aa12.07□□□□□ -0.48
NCKIPSD-208ENST00000454134 YPEL3P61236 119 aaPredicted RBP12.07□□□□□ -0.48
NCKIPSD-208ENST00000454134 USF2Q15853 346 aaPredicted RBP12.07□□□□□ -0.48
NCKIPSD-208ENST00000454134 TMEM128Q5BJH2 165 aa12.07□□□□□ -0.48
NCKIPSD-208ENST00000454134 ETFRF1Q6IPR1 90 aa12.07□□□□□ -0.48
NCKIPSD-208ENST00000454134 CCDC190Q86UF4 302 aa12.07□□□□□ -0.48
NCKIPSD-208ENST00000454134 NOXA1Q86UR1 476 aa12.07□□□□□ -0.48
NCKIPSD-208ENST00000454134 U3KQE9 123 aa12.07□□□□□ -0.48
NCKIPSD-208ENST00000454134 CA1P00915 261 aaPredicted RBP12.06□□□□□ -0.48
NCKIPSD-208ENST00000454134 IFNA4P05014 189 aa12.06□□□□□ -0.48
NCKIPSD-208ENST00000454134 IL4P05112 153 aa12.06□□□□□ -0.48
NCKIPSD-208ENST00000454134 HNRNPCP07910 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
NCKIPSD-208ENST00000454134 ZNF688P0C7X2 276 aa12.06□□□□□ -0.48
NCKIPSD-208ENST00000454134 GRAMD2BQ96HH9 432 aa12.06□□□□□ -0.48
NCKIPSD-208ENST00000454134 U3KQ87 197 aa12.06□□□□□ -0.48
NCKIPSD-208ENST00000454134 RD3LP0DJH9 198 aa12.05□□□□□ -0.48
NCKIPSD-208ENST00000454134 C16orf54Q6UWD8 224 aa12.05□□□□□ -0.48
NCKIPSD-208ENST00000454134 DCANP1Q8TF63 244 aa12.05□□□□□ -0.48
NCKIPSD-208ENST00000454134 GLMPQ8WWB7 406 aa12.05□□□□□ -0.48
NCKIPSD-208ENST00000454134 RARRES2Q99969 163 aa12.05□□□□□ -0.48
NCKIPSD-208ENST00000454134 SLC25A21Q9BQT8 299 aaPredicted RBP12.05□□□□□ -0.48
NCKIPSD-208ENST00000454134 KNCNA6PVL3 124 aa12.04□□□□□ -0.48
NCKIPSD-208ENST00000454134 PITX3O75364 302 aa12.04□□□□□ -0.48
NCKIPSD-208ENST00000454134 TOMM40O96008 361 aa12.04□□□□□ -0.48
NCKIPSD-208ENST00000454134 IAPPP10997 89 aa12.04□□□□□ -0.48
NCKIPSD-208ENST00000454134 PSG1P11464 419 aa12.04□□□□□ -0.48
NCKIPSD-208ENST00000454134 PPP1R1AQ13522 171 aa12.04□□□□□ -0.48
NCKIPSD-208ENST00000454134 STHQ8IWL8 128 aa12.04□□□□□ -0.48
NCKIPSD-208ENST00000454134 OR51G1Q8NGK1 321 aa12.04□□□□□ -0.48
NCKIPSD-208ENST00000454134 OR11H2Q8NH07 326 aa12.04□□□□□ -0.48
NCKIPSD-208ENST00000454134 GATAD1Q8WUU5 269 aa12.04□□□□□ -0.48
NCKIPSD-208ENST00000454134 SRRQ9GZT4 340 aa12.04□□□□□ -0.48
NCKIPSD-208ENST00000454134 DUXBA0A1W2PPF3 345 aa12.03□□□□□ -0.48
NCKIPSD-208ENST00000454134 SFT2D2O95562 160 aa12.03□□□□□ -0.48
NCKIPSD-208ENST00000454134 DHRS2Q13268 280 aa12.03□□□□□ -0.48
NCKIPSD-208ENST00000454134 SPANXN2Q5MJ10 180 aa12.03□□□□□ -0.48
NCKIPSD-208ENST00000454134 TMEM217Q8N7C4 229 aa12.03□□□□□ -0.48
NCKIPSD-208ENST00000454134 LRTM2Q8N967 370 aa12.03□□□□□ -0.48
NCKIPSD-208ENST00000454134 AGRNO00468 2067 aa12.02□□□□□ -0.48
NCKIPSD-208ENST00000454134 NUPR2A6NF83 97 aa12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 HELTA6NFD8 242 aa12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 ZFP92A6NM28 416 aa12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 DEFB4AO15263 64 aa12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 EIF2B2P49770 351 aaKnown RBP12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 GAMTQ14353 236 aa12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 ACTL10Q5JWF8 245 aa12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 CEMP1Q6PRD7 247 aaPredicted RBP12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 TRPT1Q86TN4 253 aaKnown RBP12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 CENPSQ8N2Z9 138 aa12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 PBDC1Q9BVG4 233 aa12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 MAGT1Q9H0U3 335 aa12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 PAIP2BQ9ULR5 123 aaKnown RBP12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 DNAH1Q9P2D7 4330 aa12.02□□□□□ -0.49
NCKIPSD-208ENST00000454134 IGKV1D-37A0A075B6S9 117 aa12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 PIGBOS1A0A0B4J2F0 54 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms