RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 C11orf94C9JXX5 98 aa11.78□□□□□ -0.52
COL18A1-205ENST00000423214 CLN5O75503 358 aa11.78□□□□□ -0.52
COL18A1-205ENST00000423214 CDS2O95674 445 aa11.78□□□□□ -0.52
COL18A1-205ENST00000423214 ZNF688P0C7X2 276 aa11.78□□□□□ -0.52
COL18A1-205ENST00000423214 SPP1P10451 314 aa11.78□□□□□ -0.52
COL18A1-205ENST00000423214 P2RY1P47900 373 aa11.78□□□□□ -0.52
COL18A1-205ENST00000423214 EIF2B2P49770 351 aaKnown RBP11.78□□□□□ -0.52
COL18A1-205ENST00000423214 SELENOHQ8IZQ5 122 aaKnown RBP11.78□□□□□ -0.52
COL18A1-205ENST00000423214 GRAMD2BQ96HH9 432 aa11.78□□□□□ -0.52
COL18A1-205ENST00000423214 PRR13Q9NZ81 148 aa11.78□□□□□ -0.52
COL18A1-205ENST00000423214 RPS10-NUDT3A0A1W2PQS6 291 aa11.77□□□□□ -0.53
COL18A1-205ENST00000423214 CRYM-AS1A6NIL9 109 aa11.77□□□□□ -0.53
COL18A1-205ENST00000423214 IGLL5B9A064 214 aa11.77□□□□□ -0.53
COL18A1-205ENST00000423214 K7EQG2 157 aa11.77□□□□□ -0.53
COL18A1-205ENST00000423214 SURF2Q15527 256 aaPredicted RBP11.77□□□□□ -0.53
COL18A1-205ENST00000423214 PYDC2Q56P42 97 aa11.77□□□□□ -0.53
COL18A1-205ENST00000423214 MORN3Q6PF18 240 aaPredicted RBP11.77□□□□□ -0.53
COL18A1-205ENST00000423214 TRPT1Q86TN4 253 aaKnown RBP11.77□□□□□ -0.53
COL18A1-205ENST00000423214 Q8NAQ8 132 aa11.77□□□□□ -0.53
COL18A1-205ENST00000423214 OR4X1Q8NH49 305 aa11.77□□□□□ -0.53
COL18A1-205ENST00000423214 FNDC4Q9H6D8 234 aaPredicted RBP11.77□□□□□ -0.53
COL18A1-205ENST00000423214 SCP2D1Q9UJQ7 156 aa11.77□□□□□ -0.53
COL18A1-205ENST00000423214 IGHV4-28A0A0C4DH34 117 aa11.76□□□□□ -0.53
COL18A1-205ENST00000423214 B3GALNT1O75752 331 aa11.76□□□□□ -0.53
COL18A1-205ENST00000423214 MIFP14174 115 aa11.76□□□□□ -0.53
COL18A1-205ENST00000423214 CRYBB3P26998 211 aa11.76□□□□□ -0.53
COL18A1-205ENST00000423214 DHODHQ02127 395 aa11.76□□□□□ -0.53
COL18A1-205ENST00000423214 TMEM268Q5VZI3 342 aa11.76□□□□□ -0.53
COL18A1-205ENST00000423214 PVRIGQ6DKI7 326 aa11.76□□□□□ -0.53
COL18A1-205ENST00000423214 RBPMSQ93062 196 aaKnown RBP11.76□□□□□ -0.53
COL18A1-205ENST00000423214 GPR146Q96CH1 333 aa11.76□□□□□ -0.53
COL18A1-205ENST00000423214 RBM38Q9H0Z9 239 aaKnown RBP11.76□□□□□ -0.53
COL18A1-205ENST00000423214 HRH4Q9H3N8 390 aa11.76□□□□□ -0.53
COL18A1-205ENST00000423214 MRPL36Q9P0J6 103 aaKnown RBP11.76□□□□□ -0.53
COL18A1-205ENST00000423214 HECTD4Q9Y4D8 3996 aa11.76□□□□□ -0.53
COL18A1-205ENST00000423214 VPS13DQ5THJ4 4388 aa11.75□□□□□ -0.53
COL18A1-205ENST00000423214 TRAV30A0A087WSZ9 112 aa11.75□□□□□ -0.53
COL18A1-205ENST00000423214 AKR1C4P17516 323 aa11.75□□□□□ -0.53
COL18A1-205ENST00000423214 C4BPBP20851 252 aa11.75□□□□□ -0.53
COL18A1-205ENST00000423214 HTR2BP41595 481 aa11.75□□□□□ -0.53
COL18A1-205ENST00000423214 MLANAQ16655 118 aa11.75□□□□□ -0.53
COL18A1-205ENST00000423214 TIGITQ495A1 244 aa11.75□□□□□ -0.53
COL18A1-205ENST00000423214 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.75□□□□□ -0.53
COL18A1-205ENST00000423214 V9GYH0 126 aa11.75□□□□□ -0.53
COL18A1-205ENST00000423214 HELTA6NFD8 242 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 KNCNA6PVL3 124 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 NXPH3O95157 252 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 S100A5P33763 92 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 SPCS3P61009 180 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 DHRS2Q13268 280 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 KLF9Q13886 244 aaPredicted RBP11.74□□□□□ -0.53
COL18A1-205ENST00000423214 ZNF79Q15937 498 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 BSXQ3C1V8 233 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 ACTL10Q5JWF8 245 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 FAM219AQ8IW50 185 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 HEYLQ9NQ87 328 aaPredicted RBP11.74□□□□□ -0.53
COL18A1-205ENST00000423214 CACNG5Q9UF02 275 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 KCNIP3Q9Y2W7 256 aa11.74□□□□□ -0.53
COL18A1-205ENST00000423214 IGKV1-17P01599 117 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 RND2P52198 227 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 PRR20EP86478 221 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 PRR20CP86479 221 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 PRR20DP86480 221 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 PRR20BP86481 221 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 PRR20AP86496 221 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 TOMM5Q8N4H5 51 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 OR1S2Q8NGQ3 325 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 DCANP1Q8TF63 244 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 TRIM63Q969Q1 353 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 SCGB3A2Q96PL1 93 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 TMEM56-RWDD3S4R434 201 aa11.73□□□□□ -0.53
COL18A1-205ENST00000423214 TRAV10A0A0B4J240 114 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 ZNF705EA8MWA4 302 aaPredicted RBP11.72□□□□□ -0.53
COL18A1-205ENST00000423214 HNRNPCP07910 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL18A1-205ENST00000423214 GIG44P09565 113 aaPredicted RBP11.72□□□□□ -0.53
COL18A1-205ENST00000423214 RBMY1A1P0DJD3 496 aaKnown RBP11.72□□□□□ -0.53
COL18A1-205ENST00000423214 RBMY1CP0DJD4 496 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 SLC25A4P12235 298 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 HLA-DMBP28068 263 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 OR10J1P30954 320 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 SUPT4H1P63272 117 aaKnown RBP11.72□□□□□ -0.53
COL18A1-205ENST00000423214 RBMY1FQ15415 496 aaKnown RBP11.72□□□□□ -0.53
COL18A1-205ENST00000423214 PSMG4Q5JS54 123 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 Q6ZTC4 211 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 CCDC190Q86UF4 302 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 SLC24A4Q8NFF2 622 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 Q8WTZ3 238 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 CLEC5AQ9NY25 188 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 TBC1D24Q9ULP9 559 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 APLNQ9ULZ1 77 aa11.72□□□□□ -0.53
COL18A1-205ENST00000423214 CEBPZOSA8MTT3 80 aa11.71□□□□□ -0.53
COL18A1-205ENST00000423214 IGLC1P0CG04 106 aa11.71□□□□□ -0.53
COL18A1-205ENST00000423214 FAUP35544 74 aaKnown RBP11.71□□□□□ -0.53
COL18A1-205ENST00000423214 AP2S1P53680 142 aaPredicted RBP11.71□□□□□ -0.53
COL18A1-205ENST00000423214 SNRPD3P62318 126 aaKnown RBP11.71□□□□□ -0.53
COL18A1-205ENST00000423214 LYZL2Q7Z4W2 148 aa11.71□□□□□ -0.53
COL18A1-205ENST00000423214 TMED4Q7Z7H5 227 aa11.71□□□□□ -0.53
COL18A1-205ENST00000423214 OR52E5Q8NH55 327 aa11.71□□□□□ -0.53
COL18A1-205ENST00000423214 RNASEH2CQ8TDP1 164 aaKnown RBP11.71□□□□□ -0.53
COL18A1-205ENST00000423214 GLMPQ8WWB7 406 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms