RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 FAM219AQ8IW50 185 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 TMEM229BQ8NBD8 167 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 OR52E5Q8NH55 327 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 LHFPL5Q8TAF8 219 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 GLYATL2Q8WU03 294 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 GLMPQ8WWB7 406 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 RAB40CQ96S21 281 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 TMEM222Q9H0R3 208 aa10.71□□□□□ -0.69
RPS28-201ENST00000417088 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.71□□□□□ -0.69
RPS28-201ENST00000417088 IGHV4-4A0A075B6R2 117 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 HELTA6NFD8 242 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 OR5AC1P0C628 307 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 ZNF182P17025 639 aaPredicted RBP10.7□□□□□ -0.7
RPS28-201ENST00000417088 EIF2B2P49770 351 aaKnown RBP10.7□□□□□ -0.7
RPS28-201ENST00000417088 RND2P52198 227 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 TAS2R19P59542 299 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 YPEL3P61236 119 aaPredicted RBP10.7□□□□□ -0.7
RPS28-201ENST00000417088 C2orf83Q53S99 150 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 PSMG4Q5JS54 123 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 STEAP1BQ6NZ63 245 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 OR1S2Q8NGQ3 325 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 Q8WTZ3 238 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 AP3S1Q92572 193 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 RTBDNQ9BSG5 229 aaPredicted RBP10.7□□□□□ -0.7
RPS28-201ENST00000417088 NAA50Q9GZZ1 169 aaKnown RBP10.7□□□□□ -0.7
RPS28-201ENST00000417088 HEYLQ9NQ87 328 aaPredicted RBP10.7□□□□□ -0.7
RPS28-201ENST00000417088 TBC1D24Q9ULP9 559 aa10.7□□□□□ -0.7
RPS28-201ENST00000417088 PCLOQ9Y6V0 5065 aa10.69□□□□□ -0.7
RPS28-201ENST00000417088 TEX13DA0A0J9YY54 714 aaPredicted RBP10.69□□□□□ -0.7
RPS28-201ENST00000417088 HNRNPCP07910 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
RPS28-201ENST00000417088 SLC25A4P12235 298 aa10.69□□□□□ -0.7
RPS28-201ENST00000417088 OR10J1P30954 320 aa10.69□□□□□ -0.7
RPS28-201ENST00000417088 AP2S1P53680 142 aaPredicted RBP10.69□□□□□ -0.7
RPS28-201ENST00000417088 DHODHQ02127 395 aa10.69□□□□□ -0.7
RPS28-201ENST00000417088 USF2Q15853 346 aaPredicted RBP10.69□□□□□ -0.7
RPS28-201ENST00000417088 CTF1Q16619 201 aa10.69□□□□□ -0.7
RPS28-201ENST00000417088 SELENOHQ8IZQ5 122 aaKnown RBP10.69□□□□□ -0.7
RPS28-201ENST00000417088 RNASEH2CQ8TDP1 164 aaKnown RBP10.69□□□□□ -0.7
RPS28-201ENST00000417088 TMEM170AQ8WVE7 144 aa10.69□□□□□ -0.7
RPS28-201ENST00000417088 RBPMSQ93062 196 aaKnown RBP10.69□□□□□ -0.7
RPS28-201ENST00000417088 GPR146Q96CH1 333 aa10.69□□□□□ -0.7
RPS28-201ENST00000417088 CACNG5Q9UF02 275 aa10.69□□□□□ -0.7
RPS28-201ENST00000417088 CELA1Q9UNI1 258 aa10.69□□□□□ -0.7
RPS28-201ENST00000417088 GABARAPO95166 117 aa10.68□□□□□ -0.7
RPS28-201ENST00000417088 FAAP20Q6NZ36 180 aa10.68□□□□□ -0.7
RPS28-201ENST00000417088 CENPSQ8N2Z9 138 aa10.68□□□□□ -0.7
RPS28-201ENST00000417088 SLC24A4Q8NFF2 622 aa10.68□□□□□ -0.7
RPS28-201ENST00000417088 C15orf40Q8WUR7 153 aa10.68□□□□□ -0.7
RPS28-201ENST00000417088 RNF126Q9BV68 326 aa10.68□□□□□ -0.7
RPS28-201ENST00000417088 NAA60Q9H7X0 242 aa10.68□□□□□ -0.7
RPS28-201ENST00000417088 FAT2Q9NYQ8 4349 aa10.67□□□□□ -0.7
RPS28-201ENST00000417088 CEBPZOSA8MTT3 80 aa10.67□□□□□ -0.7
RPS28-201ENST00000417088 FAM90A26D6RGX4 464 aa10.67□□□□□ -0.7
RPS28-201ENST00000417088 GABARAPH6UMI1 98 aa10.67□□□□□ -0.7
RPS28-201ENST00000417088 NXPH3O95157 252 aa10.67□□□□□ -0.7
RPS28-201ENST00000417088 MEF2DQ14814 521 aa10.67□□□□□ -0.7
RPS28-201ENST00000417088 C12orf74Q32Q52 190 aa10.67□□□□□ -0.7
RPS28-201ENST00000417088 NPIPB3Q92617 1050 aa10.67□□□□□ -0.7
RPS28-201ENST00000417088 MIXL1Q9H2W2 232 aa10.67□□□□□ -0.7
RPS28-201ENST00000417088 C14orf166Q9Y224 244 aaKnown RBP10.67□□□□□ -0.7
RPS28-201ENST00000417088 DNAH2Q9P225 4427 aa10.67□□□□□ -0.7
RPS28-201ENST00000417088 DNAH17Q9UFH2 4485 aa10.66□□□□□ -0.7
RPS28-201ENST00000417088 H3BMM0 161 aa10.66□□□□□ -0.7
RPS28-201ENST00000417088 BUB3O43684 328 aa10.66□□□□□ -0.7
RPS28-201ENST00000417088 IL4P05112 153 aa10.66□□□□□ -0.7
RPS28-201ENST00000417088 SNRPD3P62318 126 aaKnown RBP10.66□□□□□ -0.7
RPS28-201ENST00000417088 SURF2Q15527 256 aaPredicted RBP10.66□□□□□ -0.7
RPS28-201ENST00000417088 GPR107Q5VW38 600 aa10.66□□□□□ -0.7
RPS28-201ENST00000417088 TMEM268Q5VZI3 342 aa10.66□□□□□ -0.7
RPS28-201ENST00000417088 ZNF767PQ75MW2 155 aa10.66□□□□□ -0.7
RPS28-201ENST00000417088 SEPSECSQ9HD40 501 aaKnown RBP10.66□□□□□ -0.7
RPS28-201ENST00000417088 NRN1Q9NPD7 142 aa10.66□□□□□ -0.7
RPS28-201ENST00000417088 XCL2Q9UBD3 114 aa10.66□□□□□ -0.7
RPS28-201ENST00000417088 GPR132Q9UNW8 380 aa10.66□□□□□ -0.7
RPS28-201ENST00000417088 DEFB131BA0A096LNP1 70 aa10.65□□□□□ -0.7
RPS28-201ENST00000417088 CRYM-AS1A6NIL9 109 aa10.65□□□□□ -0.7
RPS28-201ENST00000417088 TOMM40O96008 361 aa10.65□□□□□ -0.7
RPS28-201ENST00000417088 RD3LP0DJH9 198 aa10.65□□□□□ -0.7
RPS28-201ENST00000417088 NPY1RP25929 384 aa10.65□□□□□ -0.7
RPS28-201ENST00000417088 NUTF2P61970 127 aaKnown RBP10.65□□□□□ -0.7
RPS28-201ENST00000417088 MRPS10P82664 201 aaKnown RBP10.65□□□□□ -0.7
RPS28-201ENST00000417088 SSBP1Q04837 148 aaKnown RBP10.65□□□□□ -0.7
RPS28-201ENST00000417088 ETFRF1Q6IPR1 90 aa10.65□□□□□ -0.7
RPS28-201ENST00000417088 ACY3Q96HD9 319 aa10.65□□□□□ -0.7
RPS28-201ENST00000417088 SCRT1Q9BWW7 348 aa10.65□□□□□ -0.7
RPS28-201ENST00000417088 C1QTNF4Q9BXJ3 329 aa10.65□□□□□ -0.7
RPS28-201ENST00000417088 TMEM56-RWDD3S4R434 201 aa10.65□□□□□ -0.7
RPS28-201ENST00000417088 DISC1C4P0D8 188 aa10.64□□□□□ -0.71
RPS28-201ENST00000417088 CTDSP2O14595 271 aa10.64□□□□□ -0.71
RPS28-201ENST00000417088 AMBPP02760 352 aa10.64□□□□□ -0.71
RPS28-201ENST00000417088 SMIM18P0DKX4 95 aa10.64□□□□□ -0.71
RPS28-201ENST00000417088 NMSQ5H8A3 153 aa10.64□□□□□ -0.71
RPS28-201ENST00000417088 SIGLEC15Q6ZMC9 328 aa10.64□□□□□ -0.71
RPS28-201ENST00000417088 LINC00336Q6ZUF6 198 aa10.64□□□□□ -0.71
RPS28-201ENST00000417088 NOXA1Q86UR1 476 aa10.64□□□□□ -0.71
RPS28-201ENST00000417088 GSTZ1O43708 216 aaPredicted RBP10.63□□□□□ -0.71
RPS28-201ENST00000417088 PSG1P11464 419 aa10.63□□□□□ -0.71
RPS28-201ENST00000417088 HLA-DRB4P13762 266 aa10.63□□□□□ -0.71
RPS28-201ENST00000417088 OR51G1Q8NGK1 321 aa10.63□□□□□ -0.71
RPS28-201ENST00000417088 OR4C16Q8NGL9 310 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms