RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 ZNF430Q9H8G1 570 aaPredicted RBP7.93□□□□□ -1.14
SS18-203ENST00000415083 ENY2Q9NPA8 101 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 ZNF355PQ9NSJ1 428 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 LINC00312Q9Y6C7 94 aa7.93□□□□□ -1.14
SS18-203ENST00000415083 ABCA1O95477 2261 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 CELSR1Q9NYQ6 3014 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 INS-IGF2F8WCM5 200 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 C3orf79P0CE67 100 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 CNTFRP26992 372 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 OR5B3Q8NH48 314 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 C18orf32Q8TCD1 76 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 NPIPB3Q92617 1050 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 KCNS1Q96KK3 526 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 HARBI1Q96MB7 349 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 ZNF318Q5VUA4 2279 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 A0A1W2PPI3 338 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 ZNF253O75346 499 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 RANP62826 216 aaKnown RBP7.92□□□□□ -1.14
SS18-203ENST00000415083 SPATA45Q537H7 98 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 C1orf185Q5T7R7 199 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 STPG4Q8N801 248 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 NUP35Q8NFH5 326 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 NUDT10Q8NFP7 164 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 ZNF596Q8TC21 504 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 NUDT11Q96G61 164 aa7.92□□□□□ -1.14
SS18-203ENST00000415083 TRBV9A0A0B4J1U6 114 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 AMY1AP04745 511 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 OR10J3Q5JRS4 329 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 PVRIGQ6DKI7 326 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 IGFL3Q6UXB1 125 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 Q6ZS92 163 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 PKDREJQ9NTG1 2253 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 IZUMO1RA6ND01 250 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 M0QZK8 103 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 NDUFB8O95169 186 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 GPR6P46095 362 aaPredicted RBP7.91□□□□□ -1.14
SS18-203ENST00000415083 RAB31Q13636 194 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 FAM120AOSQ5T036 256 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 THAP8Q8NA92 274 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 TMEM167AQ8TBQ9 72 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 PCNX1Q96RV3 2341 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 TXN2Q99757 166 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 SSBP4Q9BWG4 385 aaPredicted RBP7.91□□□□□ -1.14
SS18-203ENST00000415083 GSX1Q9H4S2 264 aaPredicted RBP7.91□□□□□ -1.14
SS18-203ENST00000415083 DNAJC4Q9NNZ3 241 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 DLL1O00548 723 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 MT-CO2P00403 227 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 SFTPCP11686 197 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 RPL8P62917 257 aaKnown RBP7.91□□□□□ -1.14
SS18-203ENST00000415083 EBLN2Q6P2I7 272 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 Q6ZN92 141 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 ERASQ7Z444 233 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 ZGRF1Q86YA3 2104 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 PRSS33Q8NF86 280 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 ZNF586Q9NXT0 402 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 MALRD1Q5VYJ5 2156 aa7.91□□□□□ -1.14
SS18-203ENST00000415083 A0A0G2JNJ9 132 aa7.9□□□□□ -1.14
SS18-203ENST00000415083 ZNF324O75467 553 aaPredicted RBP7.9□□□□□ -1.14
SS18-203ENST00000415083 PRB4P10163 310 aaPredicted RBP7.9□□□□□ -1.14
SS18-203ENST00000415083 UBE2L3P68036 154 aaKnown RBP7.9□□□□□ -1.14
SS18-203ENST00000415083 TNXAQ16473 311 aa7.9□□□□□ -1.14
SS18-203ENST00000415083 RTL8BQ17RB0 113 aa7.9□□□□□ -1.14
SS18-203ENST00000415083 NUP37Q8NFH4 326 aa7.9□□□□□ -1.14
SS18-203ENST00000415083 OSR1Q8TAX0 266 aaPredicted RBP7.9□□□□□ -1.14
SS18-203ENST00000415083 Q9UFV3 132 aa7.9□□□□□ -1.14
SS18-203ENST00000415083 A0A1B0GXF2 115 aa7.9□□□□□ -1.14
SS18-203ENST00000415083 IGLC7A0M8Q6 106 aa7.9□□□□□ -1.14
SS18-203ENST00000415083 MOSP00540 346 aa7.9□□□□□ -1.14
SS18-203ENST00000415083 LOXP28300 417 aaPredicted RBP7.9□□□□□ -1.14
SS18-203ENST00000415083 PCP4P48539 62 aa7.9□□□□□ -1.14
SS18-203ENST00000415083 WIPF2Q8TF74 440 aaPredicted RBP7.9□□□□□ -1.14
SS18-203ENST00000415083 MLST8Q9BVC4 326 aa7.9□□□□□ -1.14
SS18-203ENST00000415083 TCRBV4S1A1TA0A5B7 111 aa7.9□□□□□ -1.15
SS18-203ENST00000415083 CRYGCP07315 174 aa7.9□□□□□ -1.15
SS18-203ENST00000415083 APELAP0DMC3 54 aa7.9□□□□□ -1.15
SS18-203ENST00000415083 HINT1P49773 126 aaPredicted RBP7.9□□□□□ -1.15
SS18-203ENST00000415083 FBLN7Q53RD9 439 aa7.9□□□□□ -1.15
SS18-203ENST00000415083 GTSF1Q8WW33 167 aa7.9□□□□□ -1.15
SS18-203ENST00000415083 CLEC7AQ9BXN2 247 aa7.9□□□□□ -1.15
SS18-203ENST00000415083 AMMECR1Q9Y4X0 333 aaPredicted RBP7.9□□□□□ -1.15
SS18-203ENST00000415083 SH2D7A6NKC9 451 aaPredicted RBP7.89□□□□□ -1.15
SS18-203ENST00000415083 C17orf100A8MU93 164 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 TMEM178BH3BS89 294 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 H3BTX0 84 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 PEX7O00628 323 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 HYPMO75409 117 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 TIGITQ495A1 244 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 FAM231DQ6ZW35 169 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 IGFBPL1Q8WX77 278 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 CACNG8Q8WXS5 425 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 MRPL32Q9BYC8 188 aaKnown RBP7.89□□□□□ -1.15
SS18-203ENST00000415083 IGHV3-21A0A0B4J1V1 117 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 IGHV3-72A0A0B4J1Y9 119 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 CRYGBP07316 175 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 COL5A1-AS1Q5SY13 56 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 LEMD1Q68G75 181 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 C19orf24Q9BVV8 132 aa7.89□□□□□ -1.15
SS18-203ENST00000415083 hADV38S2A0JD32 116 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 C2orf70A6NJV1 201 aa7.88□□□□□ -1.15
SS18-203ENST00000415083 M0QZ24 198 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms