RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 GCSAMLQ5JQS6 135 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 DTX2Q86UW9 622 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 OR5AN1Q8NGI8 311 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 SIAH2O43255 324 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 ICAM4Q14773 271 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 EBLN2Q6P2I7 272 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 TMEM14EPQ6UXP3 125 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 ZNF843Q8N446 348 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 FAM210BQ96KR6 192 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 IGKV1-39P01597 117 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 IGKV1D-39P04432 117 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 RAB4AP20338 218 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 C2orf83Q53S99 150 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 LEMD1Q68G75 181 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 TREML4Q6UXN2 200 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 GOLT1AQ6ZVE7 132 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 GBGT1Q8N5D6 347 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 LINC00311Q8N616 119 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 KIR3DL3Q8N743 410 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 RNF125Q96EQ8 232 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 USF2Q15853 346 aaPredicted RBP7.36□□□□□ -1.23
LIG4-202ENST00000405925 ZNF833PQ6ZTB9 187 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 NHLRC2Q8NBF2 726 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 OR2D3Q8NGH3 330 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 OR10J6PQ8NGY7 276 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 SPOCK3Q9BQ16 436 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 BEX4Q9NWD9 120 aaPredicted RBP7.36□□□□□ -1.23
LIG4-202ENST00000405925 PRRC2AP48634 2157 aaKnown RBP7.36□□□□□ -1.23
LIG4-202ENST00000405925 H0Y8G0 127 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 SRD5A1P18405 259 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 DEFB113Q30KQ7 82 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 MRPL54Q6P161 138 aaKnown RBP7.36□□□□□ -1.23
LIG4-202ENST00000405925 Q71RC1 249 aaPredicted RBP7.36□□□□□ -1.23
LIG4-202ENST00000405925 ZNF439Q8NDP4 499 aa7.36□□□□□ -1.23
LIG4-202ENST00000405925 A0A1W2PPI3 338 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 TCRBV4S1A1TA0A5B7 111 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 TGOLN2O43493 480 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 ZNF600Q6ZNG1 722 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 GSX1Q9H4S2 264 aaPredicted RBP7.35□□□□□ -1.23
LIG4-202ENST00000405925 DYSFO75923 2080 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 C15orf62A8K5M9 175 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 F5H697 171 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 FCN1O00602 326 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 MLANAQ16655 118 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 C5orf17Q8NAS9 161 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 GGTLC1Q9BX51 225 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 UFC1Q9Y3C8 167 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 IGKV3-20P01619 116 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 RPL29P47914 159 aaKnown RBP7.35□□□□□ -1.23
LIG4-202ENST00000405925 IGFBPL1Q8WX77 278 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 AGMATQ9BSE5 352 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 PARLQ9H300 379 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 TRAPPC1Q9Y5R8 145 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 F11RQ9Y624 299 aaKnown RBP7.35□□□□□ -1.23
LIG4-202ENST00000405925 RFNGQ9Y644 331 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 KIAA1549Q9HCM3 1950 aa7.35□□□□□ -1.23
LIG4-202ENST00000405925 PVRIGQ6DKI7 326 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 PUSL1Q8N0Z8 303 aaKnown RBP7.34□□□□□ -1.23
LIG4-202ENST00000405925 SGMS2Q8NHU3 365 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 CHD3Q12873 2000 aaKnown RBP7.34□□□□□ -1.23
LIG4-202ENST00000405925 PSMB11A5LHX3 300 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 B4DEV8 164 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 RNASE2P10153 161 aaKnown RBP7.34□□□□□ -1.23
LIG4-202ENST00000405925 ZNF562Q6V9R5 426 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 IL17RELQ6ZVW7 336 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 C10orf105Q8TEF2 133 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 ANAPC16Q96DE5 110 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 TPSG1Q9NRR2 321 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 FLNBO75369 2602 aaKnown RBP7.34□□□□□ -1.23
LIG4-202ENST00000405925 ARHGAP21Q5T5U3 1957 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 MFSD2BA6NFX1 497 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 TMEM50AO95807 157 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 CDSNQ15517 529 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 VSIRQ9H7M9 311 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 SRD5A3Q9H8P0 318 aa7.34□□□□□ -1.23
LIG4-202ENST00000405925 TRAV34A0A0B4J273 112 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 PYYP10082 97 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 ATP5G3P48201 142 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 PSG9Q00887 426 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 LOC102723971A0A1B0GUV8 181 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 HSBP1L1C9JCN9 74 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 HLA-DRB1P01911 266 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 PSG1P11464 419 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 HIST1H1AQ02539 215 aaPredicted RBP7.33□□□□□ -1.24
LIG4-202ENST00000405925 RNF212Q495C1 297 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 CYTL1Q9NRR1 136 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 MTORP42345 2549 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 A0A1B0GWJ7 208 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 TMEM250H0YL14 139 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 HSBP1O75506 76 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 MST1LQ2TV78 715 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 TMEM14BQ9NUH8 114 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 SELENOKQ9Y6D0 94 aa7.33□□□□□ -1.24
LIG4-202ENST00000405925 SRRM4A7MD48 611 aaKnown RBP7.32□□□□□ -1.24
LIG4-202ENST00000405925 ATP6V0E1O15342 81 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 SCGB1D1O95968 90 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 MFAP2P55001 183 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 PAX8Q06710 450 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 SRSF4Q08170 494 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 1010.6 ms