RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 TRBV9A0A0B4J1U6 114 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 IGKV1D-43A0A0B4J1Z2 117 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 WIPF3A6NGB9 483 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 H3BTX0 84 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 PRDX4Q13162 271 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 OR10J3Q5JRS4 329 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 ZADH2Q8N4Q0 377 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 OR1L4Q8NGR5 311 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 NEUROG1Q92886 237 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 DDIT4LQ96D03 193 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 SPAG8Q99932 426 aaPredicted RBP7.04□□□□□ -1.28
NDE1-202ENST00000396355 SLC25A33Q9BSK2 321 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 MS4A6AQ9H2W1 248 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 CEP192Q8TEP8 1941 aa7.04□□□□□ -1.28
NDE1-202ENST00000396355 ZG16O60844 167 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 SMIM17P0DL12 118 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 H1FNTQ75WM6 255 aaPredicted RBP7.03□□□□□ -1.28
NDE1-202ENST00000396355 PRELID3AQ96N28 172 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 CITED2Q99967 270 aaPredicted RBP7.03□□□□□ -1.28
NDE1-202ENST00000396355 VGLL1Q99990 258 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 GNB1LQ9BYB4 327 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 FBLN5Q9UBX5 448 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 OR2W1Q9Y3N9 320 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 PDCD6O75340 191 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 FSTP19883 344 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 RAC3P60763 192 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 SRSF2Q01130 221 aaKnown RBP7.03□□□□□ -1.28
NDE1-202ENST00000396355 TMEM155Q4W5P6 130 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 KIR3DL3Q8N743 410 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 ZNF414Q96IQ9 312 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 HIGD1CA8MV81 97 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 OR2H2O95918 312 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 P01737 135 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 COL8A1P27658 744 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 OR8B8Q15620 311 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 SPATA12Q7Z6I5 190 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 C17orf82Q86X59 251 aaPredicted RBP7.03□□□□□ -1.28
NDE1-202ENST00000396355 C18orf32Q8TCD1 76 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 ZDHHC16Q969W1 377 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 PYGO2Q9BRQ0 406 aa7.03□□□□□ -1.28
NDE1-202ENST00000396355 A0A1W2PR77 199 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 LILRA5A6NI73 299 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 RPS20P60866 119 aaKnown RBP7.02□□□□□ -1.29
NDE1-202ENST00000396355 PLGLB1Q02325 96 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 Q0VG73 95 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 ZIC4Q8N9L1 334 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 COMMD5Q9GZQ3 224 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 MAP1LC3AQ9H492 121 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 GNG12Q9UBI6 72 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 PLXNB1O43157 2135 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 IGHV3-15A0A0B4J1V0 119 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 A0A1B0GX78 115 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 IGFBP3P17936 291 aaPredicted RBP7.02□□□□□ -1.29
NDE1-202ENST00000396355 ACP1P24666 158 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 ZFP36L1Q07352 338 aaKnown RBP7.02□□□□□ -1.29
NDE1-202ENST00000396355 FOXF1Q12946 379 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 LHFPL1Q86WI0 220 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 ZNF502Q8TBZ5 544 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 DKK4Q9UBT3 224 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 A4D1N5 150 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 ZNF716A6NP11 495 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 ZFAND5O76080 213 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 DEFB109BQ30KR1 87 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 C9orf153Q5TBE3 101 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 LYPD6Q86Y78 171 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 TTC9CQ8N5M4 171 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.02□□□□□ -1.29
NDE1-202ENST00000396355 OSR1Q8TAX0 266 aaPredicted RBP7.02□□□□□ -1.29
NDE1-202ENST00000396355 EAF1Q96JC9 268 aaPredicted RBP7.02□□□□□ -1.29
NDE1-202ENST00000396355 PRORYQ9H606 182 aa7.02□□□□□ -1.29
NDE1-202ENST00000396355 EML6Q6ZMW3 1958 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 IGHV3-43A0A0B4J1X8 118 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 DXOO77932 396 aaKnown RBP7.01□□□□□ -1.29
NDE1-202ENST00000396355 IGHV3-43DP0DP04 118 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 CCL2P13500 99 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 CD40P25942 277 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 INSL3P51460 131 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 GNG5P63218 68 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 ZP4Q12836 540 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 ZNF441Q8N8Z8 693 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 TIMD4Q96H15 378 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 TNFRSF19Q9NS68 423 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 ZZEF1O43149 2961 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 PGLYRP1O75594 196 aaPredicted RBP7.01□□□□□ -1.29
NDE1-202ENST00000396355 IGKV1D-33P01593 117 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 IGKV1-33P01594 117 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 CCL7P80098 99 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 EDDM3AQ14507 147 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 C1orf162Q8NEQ5 155 aaPredicted RBP7.01□□□□□ -1.29
NDE1-202ENST00000396355 GJC3Q8NFK1 279 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 OR13C6PQ8NH95 151 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 C18orf12Q96KH6 178 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 TRAV1-1A0A0B4J248 108 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 ZBTB34Q8NCN2 500 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 PTH2Q96A98 100 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 SPXQ9BT56 116 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 TMUB1Q9BVT8 246 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 NPCDR1Q9BY65 106 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 KLK15Q9H2R5 256 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 EDA2RQ9HAV5 297 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms