RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 NEU4Q8WWR8 484 aaPredicted RBP14.3□□□□□ -0.12
SIN3A-203ENST00000394949 COQ2Q96H96 371 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 ZNF479Q96JC4 524 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 DPM3Q9P2X0 92 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 HEATR5BQ9P2D3 2071 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 PYYP10082 97 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 MEIG1Q5JSS6 88 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 FBXL15Q9H469 300 aa14.3□□□□□ -0.12
SIN3A-203ENST00000394949 TMEM42Q69YG0 159 aa14.29□□□□□ -0.12
SIN3A-203ENST00000394949 FAM216BQ8N7L0 139 aa14.29□□□□□ -0.12
SIN3A-203ENST00000394949 PNRC2Q9NPJ4 139 aaKnown RBP14.29□□□□□ -0.12
SIN3A-203ENST00000394949 ZNF585BQ52M93 769 aa14.29□□□□□ -0.12
SIN3A-203ENST00000394949 UBE2L6O14933 153 aa14.29□□□□□ -0.12
SIN3A-203ENST00000394949 PSG8Q9UQ74 426 aa14.29□□□□□ -0.12
SIN3A-203ENST00000394949 Q0VG73 95 aa14.29□□□□□ -0.12
SIN3A-203ENST00000394949 FREM3P0C091 2139 aa14.28□□□□□ -0.12
SIN3A-203ENST00000394949 ZIC4Q8N9L1 334 aa14.28□□□□□ -0.12
SIN3A-203ENST00000394949 ABHD17AQ96GS6 310 aa14.28□□□□□ -0.12
SIN3A-203ENST00000394949 M0R381 172 aa14.28□□□□□ -0.12
SIN3A-203ENST00000394949 IGKCP01834 107 aa14.28□□□□□ -0.12
SIN3A-203ENST00000394949 POLEQ07864 2286 aa14.28□□□□□ -0.12
SIN3A-203ENST00000394949 NDUFA3O95167 84 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 PFN1P07737 140 aaKnown RBP14.27□□□□□ -0.12
SIN3A-203ENST00000394949 SRSF1Q07955 248 aaKnown RBP eCLIP14.27□□□□□ -0.12
SIN3A-203ENST00000394949 ANAPC10Q9UM13 185 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 CACNA1HO95180 2353 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 A0A0G2JMM0 328 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 A0A1W2PPB8 328 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 LINC01549A6NIU2 74 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 KIR3DP1A8MWS1 328 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 HOXA3O43365 443 aaPredicted RBP14.27□□□□□ -0.12
SIN3A-203ENST00000394949 EFNA2O43921 213 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 IGHV1-2P23083 117 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 LHX2P50458 406 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 FAM74A4Q5TZK3 123 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 RFNGQ9Y644 331 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 SIP14410 1827 aa14.27□□□□□ -0.12
SIN3A-203ENST00000394949 FHL1Q13642 323 aa14.27□□□□□ -0.13
SIN3A-203ENST00000394949 A0A0G2JLM5 398 aa14.27□□□□□ -0.13
SIN3A-203ENST00000394949 GAGE13Q4V321 117 aa14.27□□□□□ -0.13
SIN3A-203ENST00000394949 IGKV3D-15A0A087WSY6 115 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 C9orf172C9J069 976 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 ZFP36L1Q07352 338 aaKnown RBP14.26□□□□□ -0.13
SIN3A-203ENST00000394949 SLC50A1Q9BRV3 221 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 TRAV8-2A0A0B4J237 113 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 EFEMP2O95967 443 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 ORMDL2Q53FV1 153 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 MGST2Q99735 147 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 POLR3KQ9Y2Y1 108 aaPredicted RBP14.26□□□□□ -0.13
SIN3A-203ENST00000394949 ANK1P16157 1881 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 CD5LO43866 347 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 LY6EQ16553 131 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 RRN3P1Q2M238 152 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 Q5PR19 223 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 TMEM105Q8N8V8 129 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 RAX2Q96IS3 184 aa14.26□□□□□ -0.13
SIN3A-203ENST00000394949 MUC21A0A0G2JKD1 596 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 MUC21A0A140T8X8 626 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 MPV17L2Q567V2 206 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 MUC21Q5SSG8 566 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 ASCL4Q6XD76 172 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 ANAPC13Q9BS18 74 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 FBXL7Q9UJT9 491 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 RALGAPA1Q6GYQ0 2036 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 CACNA1BQ00975 2339 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 F2Z2F3 143 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 C8orf46Q8TAG6 207 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 MRAP2Q96G30 205 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 COX11Q9Y6N1 276 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 PAX1P15863 534 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 SNRPD3P62318 126 aaKnown RBP14.25□□□□□ -0.13
SIN3A-203ENST00000394949 FOXF2Q12947 444 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 RNF125Q96EQ8 232 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 SNHG12Q9BXW3 62 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 CREBBPQ92793 2442 aa14.25□□□□□ -0.13
SIN3A-203ENST00000394949 RNFT1Q5M7Z0 435 aa14.24□□□□□ -0.13
SIN3A-203ENST00000394949 CRIM1Q9NZV1 1036 aa14.24□□□□□ -0.13
SIN3A-203ENST00000394949 A8MWV9 139 aa14.24□□□□□ -0.13
SIN3A-203ENST00000394949 SYS1-DBNDD2H3BUS1 97 aa14.24□□□□□ -0.13
SIN3A-203ENST00000394949 CEACAM4O75871 244 aa14.24□□□□□ -0.13
SIN3A-203ENST00000394949 CCL19Q99731 98 aa14.24□□□□□ -0.13
SIN3A-203ENST00000394949 SEPSECSQ9HD40 501 aaKnown RBP14.24□□□□□ -0.13
SIN3A-203ENST00000394949 CYSLTR1Q9Y271 337 aa14.24□□□□□ -0.13
SIN3A-203ENST00000394949 MOB4Q9Y3A3 225 aa14.24□□□□□ -0.13
SIN3A-203ENST00000394949 CELA3BP08861 270 aa14.24□□□□□ -0.13
SIN3A-203ENST00000394949 C17orf100A8MU93 164 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 CLPSP04118 112 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 BSPH1Q075Z2 132 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 RPRMLQ8N4K4 120 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 C9orf106Q8NAJ2 232 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 MESP1Q9BRJ9 268 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 COL6A6A6NMZ7 2263 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 H3BRM9 83 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 FAM201AQ5SY85 155 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 SPATA31B1PQ5VZV4 182 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 FGFBP3Q8TAT2 258 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 KLF2Q9Y5W3 355 aaPredicted RBP14.23□□□□□ -0.13
SIN3A-203ENST00000394949 ARPC1AQ92747 370 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 FNDC10F2Z333 226 aa14.23□□□□□ -0.13
SIN3A-203ENST00000394949 CENPVQ7Z7K6 275 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms