RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SPRED2Q7Z698 418 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 SLC25A45Q8N413 288 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 PEMTQ9UBM1 199 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 ZNF625Q96I27 306 aaPredicted RBP10.48□□□□□ -0.73
HCFC1-202ENST00000369984 C1orf43Q9BWL3 253 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 CHTOPQ9Y3Y2 248 aaKnown RBP10.48□□□□□ -0.73
HCFC1-202ENST00000369984 ZSWIM8A7E2V4 1837 aa10.48□□□□□ -0.73
HCFC1-202ENST00000369984 A0A1W2PRX2 142 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 GNG5P63218 68 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 EGR4Q05215 589 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 ZNF479Q96JC4 524 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 GFRA3O60609 400 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 GZMBP10144 247 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 CACNG8Q8WXS5 425 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 GGTLC1Q9BX51 225 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 SEPSECSQ9HD40 501 aaKnown RBP10.47□□□□□ -0.73
HCFC1-202ENST00000369984 NPIPB13A6NJU9 1138 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 MSGN1A6NI15 193 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 PILRBQ9UKJ0 227 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 ERG28Q9UKR5 140 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 BSPH1Q075Z2 132 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 OTORQ9NRC9 128 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 TMEM131Q92545 1883 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 RPL23P62829 140 aaKnown RBP10.47□□□□□ -0.73
HCFC1-202ENST00000369984 RSPO4Q2I0M5 234 aaPredicted RBP10.47□□□□□ -0.73
HCFC1-202ENST00000369984 LINC01590Q5TEZ4 76 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 FAM181AQ8N9Y4 354 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 NAA38Q9BRA0 125 aaKnown RBP10.47□□□□□ -0.73
HCFC1-202ENST00000369984 PLXNB1O43157 2135 aa10.47□□□□□ -0.73
HCFC1-202ENST00000369984 LINC01560Q8TB33 94 aa10.46□□□□□ -0.73
HCFC1-202ENST00000369984 DPM3Q9P2X0 92 aa10.46□□□□□ -0.73
HCFC1-202ENST00000369984 TBX6O95947 436 aaPredicted RBP10.46□□□□□ -0.73
HCFC1-202ENST00000369984 IGKCP01834 107 aa10.46□□□□□ -0.73
HCFC1-202ENST00000369984 ASCL2Q99929 193 aa10.46□□□□□ -0.73
HCFC1-202ENST00000369984 GLRXP35754 106 aa10.46□□□□□ -0.73
HCFC1-202ENST00000369984 HS3ST3B1Q9Y662 390 aa10.46□□□□□ -0.73
HCFC1-202ENST00000369984 ITGB1BP1O14713 200 aa10.46□□□□□ -0.73
HCFC1-202ENST00000369984 NDUFAF3Q9BU61 184 aa10.46□□□□□ -0.73
HCFC1-202ENST00000369984 KLF12Q9Y4X4 402 aa10.46□□□□□ -0.73
HCFC1-202ENST00000369984 RAMP3O60896 148 aa10.46□□□□□ -0.74
HCFC1-202ENST00000369984 LILRA1O75019 489 aa10.46□□□□□ -0.74
HCFC1-202ENST00000369984 TMEM167AQ8TBQ9 72 aa10.46□□□□□ -0.74
HCFC1-202ENST00000369984 GNB1LQ9BYB4 327 aa10.46□□□□□ -0.74
HCFC1-202ENST00000369984 C4orf51C9J302 202 aa10.46□□□□□ -0.74
HCFC1-202ENST00000369984 GATA2P23769 480 aaPredicted RBP10.46□□□□□ -0.74
HCFC1-202ENST00000369984 FABP5P3A8MUU1 101 aa10.46□□□□□ -0.74
HCFC1-202ENST00000369984 IFI6P09912 130 aa10.46□□□□□ -0.74
HCFC1-202ENST00000369984 PCOLCEQ15113 449 aa10.46□□□□□ -0.74
HCFC1-202ENST00000369984 TMEM170AQ8WVE7 144 aa10.46□□□□□ -0.74
HCFC1-202ENST00000369984 CFHR5Q9BXR6 569 aa10.46□□□□□ -0.74
HCFC1-202ENST00000369984 FNDC1Q4ZHG4 1894 aaPredicted RBP10.45□□□□□ -0.74
HCFC1-202ENST00000369984 ERVK11-1P61568 191 aa10.45□□□□□ -0.74
HCFC1-202ENST00000369984 FDCSPQ8NFU4 85 aa10.45□□□□□ -0.74
HCFC1-202ENST00000369984 C12orf77C9JDV5 145 aa10.45□□□□□ -0.74
HCFC1-202ENST00000369984 DUTP33316 252 aaKnown RBP10.45□□□□□ -0.74
HCFC1-202ENST00000369984 SEC11AP67812 179 aa10.45□□□□□ -0.74
HCFC1-202ENST00000369984 C2orf82Q6UX34 121 aa10.45□□□□□ -0.74
HCFC1-202ENST00000369984 TICRRQ7Z2Z1 1910 aa10.45□□□□□ -0.74
HCFC1-202ENST00000369984 TRAV9-2A0A087WT02 112 aa10.45□□□□□ -0.74
HCFC1-202ENST00000369984 PRB3Q04118 309 aaPredicted RBP10.45□□□□□ -0.74
HCFC1-202ENST00000369984 INS-IGF2F8WCM5 200 aa10.45□□□□□ -0.74
HCFC1-202ENST00000369984 INSP01308 110 aa10.45□□□□□ -0.74
HCFC1-202ENST00000369984 CD28P10747 220 aa10.45□□□□□ -0.74
HCFC1-202ENST00000369984 C18orf12Q96KH6 178 aa10.45□□□□□ -0.74
HCFC1-202ENST00000369984 CTSBP07858 339 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 UCP1P25874 307 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 FAM168AQ92567 244 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 MYOD1P15172 320 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 ATP1A1-AS1Q5TC04 95 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 ZIC4Q8N9L1 334 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 CHCHD1Q96BP2 118 aaKnown RBP10.44□□□□□ -0.74
HCFC1-202ENST00000369984 LOXL4Q96JB6 756 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 LINC00158P58513 81 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 ZNF114Q8NC26 417 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 ANAPC10Q9UM13 185 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 ADARB2-AS1A8MUL3 147 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 ORMDL2Q53FV1 153 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 GAGE2AQ6NT46 116 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 ZNF703Q9H7S9 590 aaPredicted RBP10.44□□□□□ -0.74
HCFC1-202ENST00000369984 CD5LO43866 347 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 CTHRC1Q96CG8 243 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 CD55P08174 381 aa10.44□□□□□ -0.74
HCFC1-202ENST00000369984 A0A0G2JK05 382 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 CEACAM8P31997 349 aaPredicted RBP10.43□□□□□ -0.74
HCFC1-202ENST00000369984 CCL20P78556 96 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 FRMPD3Q5JV73 1810 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 CD33P20138 364 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 C5orf47Q569G3 176 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 ATRAIDQ6UW56 229 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 J3QW42 95 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 OR13A1Q8NGR1 328 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 NRXN2Q9P2S2 1712 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 SAA2-SAA4A0A096LPE2 208 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 EFEMP2O95967 443 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 SAA2P0DJI9 122 aaPredicted RBP10.43□□□□□ -0.74
HCFC1-202ENST00000369984 SMIM10L1P0DMW3 83 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 LAGE3Q14657 143 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 SAP25Q8TEE9 199 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 SMIM10Q96HG1 83 aa10.43□□□□□ -0.74
HCFC1-202ENST00000369984 MED12LQ86YW9 2145 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 332 ms