RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 NXPH3O95157 252 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 SULT1A3P0DMM9 295 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 SULT1A4P0DMN0 295 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 SLC25A4P12235 298 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 YPEL3P61236 119 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 KLF9Q13886 244 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 LYZL2Q7Z4W2 148 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 SLC24A4Q8NFF2 622 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 SCGB3A2Q96PL1 93 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 HSPB7Q9UBY9 170 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 CACFD1Q9UGQ2 172 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 SHPKQ9UHJ6 478 aa10.03□□□□□ -0.8
TNFRSF1A-202ENST00000366159 KMT2AQ03164 3969 aa10.02□□□□□ -0.81
TNFRSF1A-202ENST00000366159 RPS10-NUDT3A0A1W2PQS6 291 aa10.02□□□□□ -0.81
TNFRSF1A-202ENST00000366159 A0A1W2PS18 150 aa10.02□□□□□ -0.81
TNFRSF1A-202ENST00000366159 MPTX1A8MV57 137 aa10.02□□□□□ -0.81
TNFRSF1A-202ENST00000366159 K7EQG2 157 aa10.02□□□□□ -0.81
TNFRSF1A-202ENST00000366159 DCANP1Q8TF63 244 aa10.02□□□□□ -0.81
TNFRSF1A-202ENST00000366159 GATAD1Q8WUU5 269 aa10.02□□□□□ -0.81
TNFRSF1A-202ENST00000366159 METTL26Q96S19 204 aa10.02□□□□□ -0.81
TNFRSF1A-202ENST00000366159 TMEM231Q9H6L2 316 aa10.02□□□□□ -0.81
TNFRSF1A-202ENST00000366159 V9GYH0 126 aa10.02□□□□□ -0.81
TNFRSF1A-202ENST00000366159 CEBPZOSA8MTT3 80 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 DNASE2O00115 360 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 AKR1C4P17516 323 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 NPY1RP25929 384 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 OR10J1P30954 320 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 P2RY1P47900 373 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 CCR6P51684 374 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 RND2P52198 227 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 DEFB131AP59861 70 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 SMCO1Q147U7 214 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 RBMS2Q15434 407 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 ZNF79Q15937 498 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 OR1S2Q8NGQ3 325 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 RBM38Q9H0Z9 239 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 MCUBQ9NWR8 336 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 U3KQ87 197 aa10.01□□□□□ -0.81
TNFRSF1A-202ENST00000366159 NOL3O60936 208 aaKnown RBP10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 PITX3O75364 302 aa10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 SCGB2A1O75556 95 aa10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 GIG44P09565 113 aaPredicted RBP10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 LEMD1Q68G75 181 aa10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 CEMP1Q6PRD7 247 aaPredicted RBP10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 C16orf54Q6UWD8 224 aa10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 CCDC190Q86UF4 302 aa10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 LRTM2Q8N967 370 aa10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 GLMPQ8WWB7 406 aa10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 NPIPB3Q92617 1050 aa10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 GRAMD2BQ96HH9 432 aa10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 RBKSQ9H477 322 aa10□□□□□ -0.81
TNFRSF1A-202ENST00000366159 RPL11P62913 178 aaKnown RBP9.99□□□□□ -0.81
TNFRSF1A-202ENST00000366159 USF2Q15853 346 aaPredicted RBP9.99□□□□□ -0.81
TNFRSF1A-202ENST00000366159 ETFRF1Q6IPR1 90 aa9.99□□□□□ -0.81
TNFRSF1A-202ENST00000366159 NOXA1Q86UR1 476 aa9.99□□□□□ -0.81
TNFRSF1A-202ENST00000366159 LGI3Q8N145 548 aa9.99□□□□□ -0.81
TNFRSF1A-202ENST00000366159 DTD1Q8TEA8 209 aa9.99□□□□□ -0.81
TNFRSF1A-202ENST00000366159 Q8WTZ3 238 aa9.99□□□□□ -0.81
TNFRSF1A-202ENST00000366159 DEDD2Q8WXF8 326 aa9.99□□□□□ -0.81
TNFRSF1A-202ENST00000366159 LINC00476Q8WZB0 136 aa9.99□□□□□ -0.81
TNFRSF1A-202ENST00000366159 RARRES2Q99969 163 aa9.99□□□□□ -0.81
TNFRSF1A-202ENST00000366159 DUXBA0A1W2PPF3 345 aa9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 CXorf65A6NEN9 183 aa9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 NUPR2A6NF83 97 aa9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 TOMM40O96008 361 aa9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 HNRNPCP07910 306 aaKnown RBP eCLIP9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 ATP5IP56385 69 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 SRPXP78539 464 aa9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 PMS2P11Q13670 270 aa9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 TMEM128Q5BJH2 165 aa9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 TRPT1Q86TN4 253 aaKnown RBP9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 TOMM5Q8N4H5 51 aa9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 C11orf68Q9H3H3 251 aaKnown RBP9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 RABAC1Q9UI14 185 aa9.98□□□□□ -0.81
TNFRSF1A-202ENST00000366159 VPS13DQ5THJ4 4388 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 IGKV1D-37A0A075B6S9 117 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 BUB3O43684 328 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 CA1P00915 261 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 IFNA10P01566 189 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 IL4P05112 153 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 ANXA3P12429 323 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 FAUP35544 74 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 GPX4P36969 197 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 AP3S2P59780 193 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 PYDC2Q56P42 97 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 TMEM217Q8N7C4 229 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 STXBP6Q8NFX7 210 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 OR11H2Q8NH07 326 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 SLC25A21Q9BQT8 299 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 FRAS1Q86XX4 4008 aa9.97□□□□□ -0.81
TNFRSF1A-202ENST00000366159 AGRNO00468 2067 aa9.96□□□□□ -0.81
TNFRSF1A-202ENST00000366159 PIGBOS1A0A0B4J2F0 54 aa9.96□□□□□ -0.82
TNFRSF1A-202ENST00000366159 ZNF701M0R085 212 aaPredicted RBP9.96□□□□□ -0.82
TNFRSF1A-202ENST00000366159 ZNF688P0C7X2 276 aa9.96□□□□□ -0.82
TNFRSF1A-202ENST00000366159 RD3LP0DJH9 198 aa9.96□□□□□ -0.82
TNFRSF1A-202ENST00000366159 PSG1P11464 419 aa9.96□□□□□ -0.82
TNFRSF1A-202ENST00000366159 SLC25A6P12236 298 aa9.96□□□□□ -0.82
TNFRSF1A-202ENST00000366159 GAMTQ14353 236 aa9.96□□□□□ -0.82
TNFRSF1A-202ENST00000366159 ACY3Q96HD9 319 aa9.96□□□□□ -0.82
TNFRSF1A-202ENST00000366159 NARS2Q96I59 477 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms