RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 SMIM27A0A1W2PRY6 76 aa3□□□□□ -1.93
RNF38-203ENST00000353739 SRRM4A7MD48 611 aaKnown RBP3□□□□□ -1.93
RNF38-203ENST00000353739 NPIPB5A8MRT5 1133 aa3□□□□□ -1.93
RNF38-203ENST00000353739 NBR2O15453 112 aa3□□□□□ -1.93
RNF38-203ENST00000353739 MMP23AO75900 390 aa3□□□□□ -1.93
RNF38-203ENST00000353739 IGLV1-47P01700 117 aa3□□□□□ -1.93
RNF38-203ENST00000353739 RAB9AP51151 201 aa3□□□□□ -1.93
RNF38-203ENST00000353739 LINC00205P59089 165 aa3□□□□□ -1.93
RNF38-203ENST00000353739 PSG9Q00887 426 aa3□□□□□ -1.93
RNF38-203ENST00000353739 DEFA6Q01524 100 aa3□□□□□ -1.93
RNF38-203ENST00000353739 CUBNO60494 3623 aa3□□□□□ -1.93
RNF38-203ENST00000353739 FAM231BA6NCW3 169 aa3□□□□□ -1.93
RNF38-203ENST00000353739 ZNF705GA8MUZ8 300 aaPredicted RBP3□□□□□ -1.93
RNF38-203ENST00000353739 TOMM40O96008 361 aa3□□□□□ -1.93
RNF38-203ENST00000353739 SLC25A5P05141 298 aaKnown RBP3□□□□□ -1.93
RNF38-203ENST00000353739 ESDP10768 282 aa3□□□□□ -1.93
RNF38-203ENST00000353739 DEFA4P12838 97 aa3□□□□□ -1.93
RNF38-203ENST00000353739 SPATA31B1PQ5VZV4 182 aa3□□□□□ -1.93
RNF38-203ENST00000353739 LINC00305Q7Z4B0 112 aa3□□□□□ -1.93
RNF38-203ENST00000353739 OCC1Q8TAD7 63 aa3□□□□□ -1.93
RNF38-203ENST00000353739 DAZAP1Q96EP5 407 aaKnown RBP3□□□□□ -1.93
RNF38-203ENST00000353739 ATG101Q9BSB4 218 aa3□□□□□ -1.93
RNF38-203ENST00000353739 MRPL18Q9H0U6 180 aaKnown RBP3□□□□□ -1.93
RNF38-203ENST00000353739 ZNF355PQ9NSJ1 428 aa3□□□□□ -1.93
RNF38-203ENST00000353739 MED12LQ86YW9 2145 aa3□□□□□ -1.93
RNF38-203ENST00000353739 A0A1W2PPI3 338 aa3□□□□□ -1.93
RNF38-203ENST00000353739 LY6LH3BQJ8 138 aa3□□□□□ -1.93
RNF38-203ENST00000353739 CNIH1O95406 144 aa3□□□□□ -1.93
RNF38-203ENST00000353739 REG1AP05451 166 aa3□□□□□ -1.93
RNF38-203ENST00000353739 SOD3P08294 240 aa3□□□□□ -1.93
RNF38-203ENST00000353739 MGST1P10620 155 aaKnown RBP3□□□□□ -1.93
RNF38-203ENST00000353739 CRYBB3P26998 211 aa3□□□□□ -1.93
RNF38-203ENST00000353739 HOXA4Q00056 320 aaPredicted RBP3□□□□□ -1.93
RNF38-203ENST00000353739 ZNF841Q6ZN19 808 aa3□□□□□ -1.93
RNF38-203ENST00000353739 OR1B1Q8NGR6 318 aa3□□□□□ -1.93
RNF38-203ENST00000353739 NPIPB3Q92617 1050 aa3□□□□□ -1.93
RNF38-203ENST00000353739 BORCS7Q96B45 105 aa3□□□□□ -1.93
RNF38-203ENST00000353739 C1orf159Q96HA4 380 aa3□□□□□ -1.93
RNF38-203ENST00000353739 GPR82Q96P67 336 aa3□□□□□ -1.93
RNF38-203ENST00000353739 HIST1H2BLQ99880 126 aa3□□□□□ -1.93
RNF38-203ENST00000353739 URB1O60287 2271 aaKnown RBP3□□□□□ -1.93
RNF38-203ENST00000353739 IGLC7A0M8Q6 106 aa3□□□□□ -1.93
RNF38-203ENST00000353739 ODF3BA8MYP8 253 aa3□□□□□ -1.93
RNF38-203ENST00000353739 FCN1O00602 326 aa3□□□□□ -1.93
RNF38-203ENST00000353739 FOXH1O75593 365 aa3□□□□□ -1.93
RNF38-203ENST00000353739 NDUFA3O95167 84 aa3□□□□□ -1.93
RNF38-203ENST00000353739 CRISP2P16562 243 aa3□□□□□ -1.93
RNF38-203ENST00000353739 PRTN3P24158 256 aa3□□□□□ -1.93
RNF38-203ENST00000353739 BRS3P32247 399 aa3□□□□□ -1.93
RNF38-203ENST00000353739 REG1BP48304 166 aa3□□□□□ -1.93
RNF38-203ENST00000353739 CX3CL1P78423 397 aa3□□□□□ -1.93
RNF38-203ENST00000353739 Q6AWC8 147 aa3□□□□□ -1.93
RNF38-203ENST00000353739 DTX2Q86UW9 622 aa3□□□□□ -1.93
RNF38-203ENST00000353739 V9GYV3 84 aa3□□□□□ -1.93
RNF38-203ENST00000353739 PSMB11A5LHX3 300 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 FAM87AP0C7U9 286 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 NPPCP23582 126 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 RAB4BP61018 213 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 WT1-ASQ06250 92 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 C4orf17Q53FE4 359 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 BAGE3Q86Y29 109 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 BAGE2Q86Y30 109 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 TMEM75Q8N9X5 138 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 OR2T6Q8NHC8 308 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 ATP6V0BQ99437 205 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 SPXQ9BT56 116 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 ELOVL1Q9BW60 279 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 LPAR2Q9HBW0 351 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 SERTAD4Q9NUC0 356 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 EPDR1Q9UM22 224 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 HSBP1L1C9JCN9 74 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 APCSP02743 223 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 FAM106CPP0CH98 169 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 CSN1S1P47710 185 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 MFAP4P55083 255 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 PDE6HQ13956 83 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 C11orf71Q6IPW1 123 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 OR10W1Q8NGF6 305 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 LINC01560Q8TB33 94 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 SRSF12Q8WXF0 261 aaKnown RBP2.99□□□□□ -1.93
RNF38-203ENST00000353739 FXYD5Q96DB9 178 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 KCNS1Q96KK3 526 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 GPR61Q9BZJ8 451 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 ZNF586Q9NXT0 402 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 MRPL27Q9P0M9 148 aaKnown RBP2.99□□□□□ -1.93
RNF38-203ENST00000353739 CIDEAO60543 219 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 RPLP1P05386 114 aaKnown RBP2.99□□□□□ -1.93
RNF38-203ENST00000353739 COX7A1P24310 79 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 FCGR2BP31994 310 aaPredicted RBP2.99□□□□□ -1.93
RNF38-203ENST00000353739 ADMP35318 185 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 SUMO1P63165 101 aaKnown RBP2.99□□□□□ -1.93
RNF38-203ENST00000353739 BPIFA4PQ86YQ2 179 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 TTC9CQ8N5M4 171 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 SIGLECL1Q8N7X8 197 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 TSKUQ8WUA8 353 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 TMEM37Q8WXS4 190 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 FAM167A-AS1Q96KT0 104 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 KLF12Q9Y4X4 402 aa2.99□□□□□ -1.93
RNF38-203ENST00000353739 A8MWL6 223 aa2.98□□□□□ -1.93
RNF38-203ENST00000353739 SNURFLB1AK76 121 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms