RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 STX12Q86Y82 276 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 THAP6Q8TBB0 222 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 WDR89Q96FK6 387 aaPredicted RBP9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 GGACTQ9BVM4 153 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 C11orf1Q9H5F2 150 aa9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 LYRM2Q9NU23 88 aaPredicted RBP9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 MRPL36Q9P0J6 103 aaKnown RBP9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 ZMAT5Q9UDW3 170 aaKnown RBP9.11□□□□□ -0.95
SPTLC1-202ENST00000337841 ZFP92A6NM28 416 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 PMS2P5A8MQ11 134 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 K7EMT4 169 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 S100A11P31949 105 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 SULT1A1P50225 295 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 ELLP55199 621 aaPredicted RBP9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 RAP2BP61225 183 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 YPEL3P61236 119 aaPredicted RBP9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 HBG1P69891 147 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 HBG2P69892 147 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 DLK1P80370 383 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 TIGITQ495A1 244 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 TMEM252Q8N6L7 170 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 C20orf24Q9BUV8 137 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 RNF126Q9BV68 326 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 NPVFQ9HCQ7 196 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 OR5AC2Q9NZP5 309 aa9.1□□□□□ -0.95
SPTLC1-202ENST00000337841 SMCO3A2RU48 225 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 PRSS46E5RG02 174 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 FNDC10F2Z333 226 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 H0YIZ8 118 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 SAP30O75446 220 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 CST7O76096 145 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 IGLC1P0CG04 106 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 RD3LP0DJH9 198 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 AKR1C1Q04828 323 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 ATP6V1FQ16864 119 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 OXLD1Q5BKU9 147 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 Q6ZNX1 250 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 TMEM144Q7Z5S9 345 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 MARC2Q969Z3 335 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 GINS3Q9BRX5 216 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 SIGLEC8Q9NYZ4 499 aa9.09□□□□□ -0.95
SPTLC1-202ENST00000337841 WNK1Q9H4A3 2382 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 IGSF23A1L1A6 192 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 CCNKO75909 580 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 IGKV1-17P01599 117 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 CSN3P07498 182 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 FOLR2P14207 255 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 CBLN1P23435 193 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 NUP62P37198 522 aaPredicted RBP9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 SLC38A11Q08AI6 406 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 TM4SF20Q53R12 229 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 TOMM20LQ6UXN7 152 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 UNQ9165/PRO28630Q6UXU0 137 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 IL34Q6ZMJ4 242 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 ACOT7LQ6ZUV0 252 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 TMEM217Q8N7C4 229 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 THAP8Q8NA92 274 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 TMEM190Q8WZ59 177 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 TRGV9Q99603 122 aa9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 MRPL27Q9P0M9 148 aaKnown RBP9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 PUS1Q9Y606 427 aaKnown RBP eCLIP9.08□□□□□ -0.96
SPTLC1-202ENST00000337841 TRAV14DV4A0A0A6YYC5 116 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 C2orf70A6NJV1 201 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 A8MWP6 167 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 TOMM40O96008 361 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 CFDP00746 253 aaPredicted RBP9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 NPPCP23582 126 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 RPL12P30050 165 aaKnown RBP9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 PRR20EP86478 221 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 PRR20CP86479 221 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 PRR20DP86480 221 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 PRR20BP86481 221 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 PRR20AP86496 221 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 BAXQ07812 192 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 ARL16Q0P5N6 197 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 RAB31Q13636 194 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 SAMD5Q5TGI4 173 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 HAPLN4Q86UW8 402 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 LILRB2Q8N423 598 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 DYNLRB2Q8TF09 96 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 DAZ1Q9NQZ3 744 aaKnown RBP9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 TECRQ9NZ01 308 aaKnown RBP9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 MBD2Q9UBB5 411 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 PFDN2Q9UHV9 154 aa9.07□□□□□ -0.96
SPTLC1-202ENST00000337841 G3V4G9 280 aa9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 PSG1P11464 419 aa9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 LYL1P12980 280 aa9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 BMI1P35226 326 aa9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 EWSR1Q01844 656 aaKnown RBP eCLIP9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 NHLH2Q02577 135 aa9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 TEPPQ6URK8 271 aa9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 OR51G1Q8NGK1 321 aa9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 OR2T35Q8NGX2 323 aa9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 NARS2Q96I59 477 aaKnown RBP9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 TMEM147Q9BVK8 224 aa9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 UQCC1Q9NVA1 299 aa9.06□□□□□ -0.96
SPTLC1-202ENST00000337841 IGKV1D-37A0A075B6S9 117 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 IGHV3OR16-8A0A075B7F1 116 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 A0A1W2PS18 150 aa9.05□□□□□ -0.96
SPTLC1-202ENST00000337841 TMEM213A2RRL7 107 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms