RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 OR8B3Q8NGG8 313 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 PPP1R35Q8TAP8 253 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 SPRY4Q9C004 299 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 IFI27L2Q9H2X8 130 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 H0YJW9 148 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 TBR1Q16650 682 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 CNEP1R1Q8N9A8 125 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 OR2Z1Q8NG97 314 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 NEUROG1Q92886 237 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 SNRNP40Q96DI7 357 aaKnown RBP11.22□□□□□ -0.61
SYNE3-201ENST00000334258 TET2Q6N021 2002 aaPredicted RBP11.22□□□□□ -0.61
SYNE3-201ENST00000334258 IGKV1OR2-108A0A075B7D4 117 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 hDV102S1A0JD36 115 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 CORTO00230 105 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 KIR2DS2P43631 304 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 GDF5OSQ5U4N7 250 aa11.22□□□□□ -0.61
SYNE3-201ENST00000334258 IGHV1-2P23083 117 aa11.21□□□□□ -0.61
SYNE3-201ENST00000334258 UTF1Q5T230 341 aa11.21□□□□□ -0.61
SYNE3-201ENST00000334258 OR1N2Q8NGR9 330 aa11.21□□□□□ -0.61
SYNE3-201ENST00000334258 PLSCR4Q9NRQ2 329 aa11.21□□□□□ -0.61
SYNE3-201ENST00000334258 GAGE12BA1L429 117 aa11.21□□□□□ -0.62
SYNE3-201ENST00000334258 PYYP10082 97 aa11.21□□□□□ -0.62
SYNE3-201ENST00000334258 TCF15Q12870 199 aa11.21□□□□□ -0.62
SYNE3-201ENST00000334258 AMMECR1LQ6DCA0 310 aa11.21□□□□□ -0.62
SYNE3-201ENST00000334258 IGF2BP2-AS1Q96M15 143 aa11.21□□□□□ -0.62
SYNE3-201ENST00000334258 SLC25A33Q9BSK2 321 aa11.21□□□□□ -0.62
SYNE3-201ENST00000334258 OR2T8A6NH00 312 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 C2orf70A6NJV1 201 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 CD24P25063 80 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 RTL8BQ17RB0 113 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 TMEM186Q96B77 213 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 IDI2-AS1Q9NZ38 188 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 FOXA2Q9Y261 457 aaPredicted RBP11.2□□□□□ -0.62
SYNE3-201ENST00000334258 LGALS7P47929 136 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 C1orf229Q6ZS94 237 aaPredicted RBP11.2□□□□□ -0.62
SYNE3-201ENST00000334258 GRAMD2BQ96HH9 432 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 MCRIP2Q9BUT9 160 aaKnown RBP11.2□□□□□ -0.62
SYNE3-201ENST00000334258 MGST3O14880 152 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 IGHV3-48P01763 117 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 LRRC10Q5BKY1 277 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 RNFT1Q5M7Z0 435 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 MORN5Q5VZ52 161 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 SLC25A34Q6PIV7 304 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 SPATA12Q7Z6I5 190 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 CALYQ9NYX4 217 aa11.2□□□□□ -0.62
SYNE3-201ENST00000334258 ABCA1O95477 2261 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 KLRC4-KLRK1H3BQV0 150 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 PLAUP00749 431 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 SAA2P0DJI9 122 aaPredicted RBP11.19□□□□□ -0.62
SYNE3-201ENST00000334258 CEACAM3P40198 252 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 TCF24Q7RTU0 167 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 PRNDQ9UKY0 176 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 HEATR1Q9H583 2144 aaKnown RBP11.19□□□□□ -0.62
SYNE3-201ENST00000334258 MUC21A0A0G2JKD1 596 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 MUC21A0A140T8X8 626 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 COX7A2P2O60397 106 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 LEPROTL1O95214 131 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 HIST1H1EP10412 219 aaKnown RBP11.19□□□□□ -0.62
SYNE3-201ENST00000334258 APOBEC3AP31941 199 aaPredicted RBP11.19□□□□□ -0.62
SYNE3-201ENST00000334258 ZNF137PP52743 207 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 MUC21Q5SSG8 566 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 TRGV5A0A0B4J1U4 118 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 TOX4O94842 621 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 MC5RP33032 325 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 LOXL3P58215 753 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 CT45A1Q5HYN5 189 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 CT45A3Q8NHU0 189 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
SYNE3-201ENST00000334258 IGKV1D-17A0A075B6S4 117 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 TRAV26-1A0A087WT03 109 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 GNG5P63218 68 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 RASL11AQ6T310 242 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 KLF13Q9Y2Y9 288 aaPredicted RBP11.18□□□□□ -0.62
SYNE3-201ENST00000334258 PEX7O00628 323 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 SMAGPQ0VAQ4 97 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 DEFB109BQ30KR1 87 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 INO80CQ6PI98 192 aaPredicted RBP11.18□□□□□ -0.62
SYNE3-201ENST00000334258 ZNF841Q6ZN19 808 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 FAM90A1Q86YD7 464 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 PRSS33Q8NF86 280 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 FDCSPQ8NFU4 85 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 OR10W1Q8NGF6 305 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 WIPF2Q8TF74 440 aaPredicted RBP11.18□□□□□ -0.62
SYNE3-201ENST00000334258 PMCHL2Q9BQD1 86 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 C19orf24Q9BVV8 132 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 ST20Q9HBF5 79 aa11.18□□□□□ -0.62
SYNE3-201ENST00000334258 SSX8Q7RTT4 187 aa11.17□□□□□ -0.62
SYNE3-201ENST00000334258 BLNKQ8WV28 456 aa11.17□□□□□ -0.62
SYNE3-201ENST00000334258 CHRDL1Q9BU40 450 aa11.17□□□□□ -0.62
SYNE3-201ENST00000334258 TMEM191AQ9H0A3 160 aa11.17□□□□□ -0.62
SYNE3-201ENST00000334258 RBPJQ06330 500 aa11.17□□□□□ -0.62
SYNE3-201ENST00000334258 C12orf54Q6X4T0 127 aa11.17□□□□□ -0.62
SYNE3-201ENST00000334258 DDB2Q92466 427 aa11.17□□□□□ -0.62
SYNE3-201ENST00000334258 ARFGEF3Q5TH69 2177 aa11.17□□□□□ -0.62
SYNE3-201ENST00000334258 PKDREJQ9NTG1 2253 aa11.17□□□□□ -0.62
SYNE3-201ENST00000334258 SYS1-DBNDD2H3BUS1 97 aa11.17□□□□□ -0.62
SYNE3-201ENST00000334258 TAX1BP3O14907 124 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms