RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 H2BFWTQ7Z2G1 175 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 TBC1D26Q86UD7 250 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 SNX29P2Q8IUI4 249 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 TERB2Q8NHR7 220 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 LRRC20Q8TCA0 184 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 DYNC2LI1Q8TCX1 351 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 RNF125Q96EQ8 232 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 ABHD1Q96SE0 405 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 SLC2A8Q9NY64 477 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 MRPL27Q9P0M9 148 aaKnown RBP4.78□□□□□ -1.64
SMG1-201ENST00000330588 UFC1Q9Y3C8 167 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 OR51B2Q9Y5P1 312 aa4.78□□□□□ -1.64
SMG1-201ENST00000330588 CMYA5Q8N3K9 4069 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 TRAV3A0A0B4J244 114 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 TMEM213A2RRL7 107 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 CBY3A6NI87 242 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 M0QYG6 137 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 CORTO00230 105 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 TGOLN2O43493 480 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 IGKV1-39P01597 117 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 CD3DP04234 171 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 IGKV1D-39P04432 117 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 IFNA4P05014 189 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 CD5P06127 495 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 CTSDP07339 412 aaPredicted RBP4.77□□□□□ -1.65
SMG1-201ENST00000330588 OR13C7P0DN81 318 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 FOLR2P14207 255 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 CBLN1P23435 193 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 UCP1P25874 307 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 G6PCP35575 357 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 AP3S2P59780 193 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 HSPE1P61604 102 aaKnown RBP4.77□□□□□ -1.65
SMG1-201ENST00000330588 DEFA5Q01523 94 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 BAK1Q16611 211 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 CLEC19AQ6UXS0 136 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 LINC00322Q6ZN03 302 aaPredicted RBP4.77□□□□□ -1.65
SMG1-201ENST00000330588 SBSPONQ8IVN8 264 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 SELENOHQ8IZQ5 122 aaKnown RBP4.77□□□□□ -1.65
SMG1-201ENST00000330588 NHLRC2Q8NBF2 726 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 OR2D3Q8NGH3 330 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 OR52I2Q8NH67 350 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 DYNLRB2Q8TF09 96 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 TMEM190Q8WZ59 177 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 RCHY1Q96PM5 261 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 C2orf88Q9BSF0 95 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 NXF2Q9GZY0 626 aaKnown RBP4.77□□□□□ -1.65
SMG1-201ENST00000330588 MIXL1Q9H2W2 232 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 C5orf66Q9H5L9 145 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 DAZ1Q9NQZ3 744 aaKnown RBP4.77□□□□□ -1.65
SMG1-201ENST00000330588 KLK11Q9UBX7 282 aa4.77□□□□□ -1.65
SMG1-201ENST00000330588 RSL24D1Q9UHA3 163 aaKnown RBP4.77□□□□□ -1.65
SMG1-201ENST00000330588 C3orf85A0A1B0GTC6 90 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 A0A1W2PPQ1 181 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 C15orf62A8K5M9 175 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 PPP5D1E7EU14 171 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 K7EIM0 57 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 TCAPO15273 167 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 RGS5O15539 181 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 OR2C1O95371 312 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 PGAM2P15259 253 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 GPX4P36969 197 aaPredicted RBP4.76□□□□□ -1.65
SMG1-201ENST00000330588 PIGPP57054 158 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 DHODHQ02127 395 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 GAGE1Q13065 139 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 CD300EQ496F6 205 aaPredicted RBP4.76□□□□□ -1.65
SMG1-201ENST00000330588 PHLDA2Q53GA4 152 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 SPANXN2Q5MJ10 180 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 ZNF57Q68EA5 555 aaPredicted RBP4.76□□□□□ -1.65
SMG1-201ENST00000330588 STEAP1BQ6NZ63 245 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 PLET1Q6UQ28 207 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 OR10W1Q8NGF6 305 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 OR52E5Q8NH55 327 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 OR4A16Q8NH70 328 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 IL22RA2Q969J5 263 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 SCGB3A2Q96PL1 93 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 SPAG8Q99932 426 aaPredicted RBP4.76□□□□□ -1.65
SMG1-201ENST00000330588 PRRT1Q99946 306 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 SOSTQ9BQB4 213 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 C21orf62Q9NYP8 219 aa4.76□□□□□ -1.65
SMG1-201ENST00000330588 SORL1Q92673 2214 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 ANKRD20A5PA0PJZ0 165 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 DISC1C4P0D8 188 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 MED6O75586 246 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 CDS2O95674 445 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 S100A8P05109 93 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 REG1AP05451 166 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 AKAIN1P0CW23 69 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 GPR183P32249 361 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 SUB1P53999 127 aaKnown RBP eCLIP4.75□□□□□ -1.65
SMG1-201ENST00000330588 ERHP84090 104 aaKnown RBP4.75□□□□□ -1.65
SMG1-201ENST00000330588 SLC16A13Q7RTY0 426 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 MUC7Q8TAX7 377 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 SCARB1Q8WTV0 552 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 GALNT14Q96FL9 552 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 OR10C1Q96KK4 312 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 SLIRPQ9GZT3 109 aaKnown RBP4.75□□□□□ -1.65
SMG1-201ENST00000330588 TMEM222Q9H0R3 208 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 TUBA4BQ9H853 241 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 COPZ2Q9P299 210 aa4.75□□□□□ -1.65
SMG1-201ENST00000330588 C14orf166Q9Y224 244 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms