RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SVEP1Q4LDE5 3571 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 IGHV1-3A0A0C4DH29 117 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 TYMSP04818 313 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 GPX4P36969 197 aaPredicted RBP9.28□□□□□ -0.92
PTPN2-201ENST00000309660 LGALS7P47929 136 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 HES1Q14469 280 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 SSX8Q7RTT4 187 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 LINC00311Q8N616 119 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 FAM103A1Q9BTL3 118 aaKnown RBP9.28□□□□□ -0.92
PTPN2-201ENST00000309660 PRDM13Q9H4Q3 707 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 TCRBV4S1A1TA0A5B7 111 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 DEFA6Q01524 100 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 PRR31Q5SQ13 230 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 RNASEH2CQ8TDP1 164 aaKnown RBP9.28□□□□□ -0.92
PTPN2-201ENST00000309660 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
PTPN2-201ENST00000309660 AMMECR1Q9Y4X0 333 aaPredicted RBP9.28□□□□□ -0.92
PTPN2-201ENST00000309660 S4R3C0 116 aa9.28□□□□□ -0.92
PTPN2-201ENST00000309660 SCGB1D1O95968 90 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 CA7P43166 264 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 ATP5IP56385 69 aaPredicted RBP9.27□□□□□ -0.93
PTPN2-201ENST00000309660 RPL15P61313 204 aaKnown RBP9.27□□□□□ -0.93
PTPN2-201ENST00000309660 MMDQ15546 238 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 PATE2Q6UY27 113 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 OR8B3Q8NGG8 313 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 C11orf52Q96A22 123 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 OR8B2Q96RD0 313 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 NAT8BQ9UHF3 227 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 HIVEP3Q5T1R4 2406 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 COL12A1Q99715 3063 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 BUB1B-PAK6H3BSN5 160 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 NUPR1O60356 82 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 CTAG1AP78358 180 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 KLRD1Q13241 179 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 IBA57Q5T440 356 aaKnown RBP9.27□□□□□ -0.93
PTPN2-201ENST00000309660 PPP1R27Q86WC6 154 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 OR1L4Q8NGR5 311 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 OR4A5Q8NH83 315 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 FAM167A-AS1Q96KT0 104 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 SIGLEC9Q9Y336 463 aa9.27□□□□□ -0.93
PTPN2-201ENST00000309660 IGLC7A0M8Q6 106 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 C9JCJ5 164 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 TSTD3H0UI37 97 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 GZMBP10144 247 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 MFAP2P55001 183 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 BAGE3Q86Y29 109 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 BAGE2Q86Y30 109 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 BTF3L4Q96K17 158 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 IGKV1D-37A0A075B6S9 117 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 C22orf46C9J442 243 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 RBP4P02753 201 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 LYZP61626 148 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 C19orf24Q9BVV8 132 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 MSRB2Q9Y3D2 182 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 TIMM23O14925 209 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 SLC25A5P05141 298 aaKnown RBP9.26□□□□□ -0.93
PTPN2-201ENST00000309660 CRISP2P16562 243 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 MRPL32Q9BYC8 188 aaKnown RBP9.26□□□□□ -0.93
PTPN2-201ENST00000309660 V9GYV3 84 aa9.26□□□□□ -0.93
PTPN2-201ENST00000309660 A0A1W2PRE2 83 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 IGLV1-47P01700 117 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 FAM71F2Q6NXP2 309 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 ZNF841Q6ZN19 808 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 KIR3DL3Q8N743 410 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 ST6GALNAC3Q8NDV1 305 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 SRSF12Q8WXF0 261 aaKnown RBP9.25□□□□□ -0.93
PTPN2-201ENST00000309660 SPG11Q96JI7 2443 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 PGPA6NDG6 321 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 ISLRO14498 428 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 NDUFS6O75380 124 aaKnown RBP9.25□□□□□ -0.93
PTPN2-201ENST00000309660 SELENOTP62341 195 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 LY6DQ14210 128 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 JOSD1Q15040 202 aaPredicted RBP9.25□□□□□ -0.93
PTPN2-201ENST00000309660 UNQ6494/PRO21346Q6UXR6 183 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 RAB1BQ9H0U4 201 aa9.25□□□□□ -0.93
PTPN2-201ENST00000309660 F2Z2F3 143 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 UBE2G1P62253 170 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 KLF17Q5JT82 389 aaPredicted RBP9.24□□□□□ -0.93
PTPN2-201ENST00000309660 TEX45Q8NA69 505 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 CMTM2Q8TAZ6 248 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 TIMD4Q96H15 378 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 A0A087X0M5 115 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 A0A1B0GX30 115 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 PSMB11A5LHX3 300 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 ZNF705FA8MVS1 300 aaPredicted RBP9.24□□□□□ -0.93
PTPN2-201ENST00000309660 ZNF705DP0CH99 300 aaPredicted RBP9.24□□□□□ -0.93
PTPN2-201ENST00000309660 ZNF705BP0CI00 300 aaPredicted RBP9.24□□□□□ -0.93
PTPN2-201ENST00000309660 ZNF137PP52743 207 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 ADORA2A-AS1P86434 159 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 KLRB1Q12918 225 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 SSX2Q16385 188 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 MRGPRG-AS1Q2M3A8 158 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 ETFRF1Q6IPR1 90 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 ZNF596Q8TC21 504 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 FAM168AQ92567 244 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 MS4A10Q96PG2 267 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 RNF2Q99496 336 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 SAMD10Q9BYL1 202 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 LIPFP07098 398 aa9.24□□□□□ -0.93
PTPN2-201ENST00000309660 COMPP49747 757 aaPredicted RBP9.24□□□□□ -0.93
PTPN2-201ENST00000309660 GBGT1Q8N5D6 347 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms