RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CD55P08174 381 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 STAG3L2P0CL84 134 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 STAG3L3P0CL85 134 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 AREGP15514 252 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 IL3RAP26951 378 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 OR10J1P30954 320 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 G6PCP35575 357 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 OR3A1P47881 315 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 COMPP49747 757 aaPredicted RBP3.94□□□□□ -1.78
CKS1B-201ENST00000308987 BRWD1-AS2P59051 145 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 ERVFC1-1P60608 527 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 ERVS71-1P61550 626 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 RANP62826 216 aaKnown RBP3.94□□□□□ -1.78
CKS1B-201ENST00000308987 ADIPOQQ15848 244 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 SMIM21Q3B7S5 101 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 PDZD11Q5EBL8 140 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 ACP7Q6ZNF0 438 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 PNKDQ8N490 385 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 Q8N7P7 452 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.94□□□□□ -1.78
CKS1B-201ENST00000308987 OR1L1Q8NH94 360 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 PPP1R35Q8TAP8 253 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 CORO2AQ92828 525 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 ZNF48Q96MX3 618 aaPredicted RBP3.94□□□□□ -1.78
CKS1B-201ENST00000308987 YPEL2Q96QA6 119 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 PIMREGQ9BSJ6 248 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 OR2J1Q9GZK6 312 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 OR2D2Q9H210 308 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 OBP2BQ9NPH6 170 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 CLN8Q9UBY8 286 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 JPT1Q9UK76 154 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 FUT9Q9Y231 359 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 SACSQ9NZJ4 4579 aa3.94□□□□□ -1.78
CKS1B-201ENST00000308987 NOTCH3Q9UM47 2321 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 TRGV10A0A0A0MS01 117 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 KIR2DL5BA0A0G2JN68 375 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 KIR2DL5BA0A0G2JPC4 375 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 A0A0U1RQK1 487 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 ZNF320A2RRD8 509 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 TMEM89A2RUT3 159 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 PRSS46E5RG02 174 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 C15orf65H3BRN8 121 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 M0R143 59 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 F2RL2O00254 374 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 RAMP3O60896 148 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 MMP23AO75900 390 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 IGKV3-15P01624 115 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 IGLV1-44P01699 117 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 MT-ND6P03923 174 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 OR4A8P0C604 315 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 OR10J4P0C629 311 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 CECR9P0C854 216 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 RD3LP0DJH9 198 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 RAB4AP20338 218 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 NPPCP23582 126 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 DUTP33316 252 aaKnown RBP3.93□□□□□ -1.78
CKS1B-201ENST00000308987 VDAC2P45880 294 aaPredicted RBP3.93□□□□□ -1.78
CKS1B-201ENST00000308987 RPL29P47914 159 aaKnown RBP3.93□□□□□ -1.78
CKS1B-201ENST00000308987 RAB7AP51149 207 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 ERVK-16P61578 105 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 RHOBP62745 196 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 GNB1P62873 340 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 Q0VG73 95 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 ZNF816Q0VGE8 651 aaPredicted RBP3.93□□□□□ -1.78
CKS1B-201ENST00000308987 PSG7Q13046 419 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 RAB31Q13636 194 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 EFNB3Q15768 340 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 POU2AF1Q16633 256 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 RTL8BQ17RB0 113 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 ZNF718Q3SXZ3 478 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 C12orf54Q6X4T0 127 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 SSX8Q7RTT4 187 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 C11orf53Q8IXP5 236 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 KIR2DL5AQ8N109 375 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 OR52L2PQ8NGH6 319 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 OR10G8Q8NGN5 311 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 SLC25A40Q8TBP6 338 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 KLF14Q8TD94 323 aaPredicted RBP3.93□□□□□ -1.78
CKS1B-201ENST00000308987 TMEM37Q8WXS4 190 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 R3HDM4Q96D70 268 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 C5orf30Q96GV9 206 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 COQ2Q96H96 371 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 SFRP2Q96HF1 295 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 ADTRPQ96IZ2 230 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 UHRF2Q96PU4 802 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 C20orf144Q9BQM9 153 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 ELOVL1Q9BW60 279 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 OR51B6Q9H340 312 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 PRO1933Q9H354 126 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 NPVFQ9HCQ7 196 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 ESM1Q9NQ30 184 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 FKBP11Q9NYL4 201 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 IL36BQ9NZH7 164 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 SLC25A10Q9UBX3 287 aaPredicted RBP3.93□□□□□ -1.78
CKS1B-201ENST00000308987 LSM4Q9Y4Z0 139 aaKnown RBP3.93□□□□□ -1.78
CKS1B-201ENST00000308987 TRAPPC1Q9Y5R8 145 aa3.93□□□□□ -1.78
CKS1B-201ENST00000308987 KIAA2026Q5HYC2 2103 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 SAA2-SAA4A0A096LPE2 208 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 TRAV39A0A0B4J263 110 aa3.92□□□□□ -1.78
CKS1B-201ENST00000308987 A0A1B0GV90 55 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms