RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SH2D7A6NKC9 451 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-201ENST00000279247 PATE2Q6UY27 113 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 MRPL41Q8IXM3 137 aaKnown RBP14.28□□□□□ -0.12
CAPN1-201ENST00000279247 BLNKQ8WV28 456 aa14.28□□□□□ -0.12
CAPN1-201ENST00000279247 ODF3BA8MYP8 253 aa14.27□□□□□ -0.12
CAPN1-201ENST00000279247 C8orf88P0DMB2 117 aa14.27□□□□□ -0.12
CAPN1-201ENST00000279247 LMO4P61968 165 aa14.27□□□□□ -0.12
CAPN1-201ENST00000279247 FAM120AOSQ5T036 256 aa14.27□□□□□ -0.12
CAPN1-201ENST00000279247 ASPHD1Q5U4P2 390 aa14.27□□□□□ -0.12
CAPN1-201ENST00000279247 LINC00305Q7Z4B0 112 aa14.27□□□□□ -0.12
CAPN1-201ENST00000279247 LINC01551Q86U37 167 aa14.27□□□□□ -0.12
CAPN1-201ENST00000279247 KIR3DL3Q8N743 410 aa14.27□□□□□ -0.12
CAPN1-201ENST00000279247 F11RQ9Y624 299 aaKnown RBP14.27□□□□□ -0.12
CAPN1-201ENST00000279247 FOLR2P14207 255 aa14.27□□□□□ -0.13
CAPN1-201ENST00000279247 FAM3BP58499 235 aaPredicted RBP14.27□□□□□ -0.13
CAPN1-201ENST00000279247 OR1P1Q8NH06 330 aa14.27□□□□□ -0.13
CAPN1-201ENST00000279247 ANKRD17O75179 2603 aaKnown RBP14.27□□□□□ -0.13
CAPN1-201ENST00000279247 GALR1P47211 349 aa14.26□□□□□ -0.13
CAPN1-201ENST00000279247 TAS2R45P59539 299 aa14.26□□□□□ -0.13
CAPN1-201ENST00000279247 PERPQ96FX8 193 aa14.26□□□□□ -0.13
CAPN1-201ENST00000279247 IGHV2-70DA0A0C4DH43 119 aa14.26□□□□□ -0.13
CAPN1-201ENST00000279247 INS-IGF2F8WCM5 200 aa14.26□□□□□ -0.13
CAPN1-201ENST00000279247 OR5B12Q96R08 314 aa14.26□□□□□ -0.13
CAPN1-201ENST00000279247 RPH3ALQ9UNE2 315 aa14.26□□□□□ -0.13
CAPN1-201ENST00000279247 F6UZH7 168 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 IGHV3-23P01764 117 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 LYZP61626 148 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 FABP9Q0Z7S8 132 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 SGK494Q96LW2 274 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 SLC25A2Q9BXI2 301 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 TMEM11P17152 192 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 ATP5J2P56134 94 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 OR2T10Q8NGZ9 312 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 OCC1Q8TAD7 63 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 SIRPDQ9H106 197 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 GGTLC3B5MD39 225 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 SAA4P35542 130 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 CX3CL1P78423 397 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 OR5I1Q13606 314 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 C5orf64Q2M2E5 130 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 ETFRF1Q6IPR1 90 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 PQLC2Q6ZP29 291 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 NHLRC2Q8NBF2 726 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 LINC00479Q96M42 142 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 TBX15Q96SF7 602 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 ZANQ9Y493 2812 aa14.25□□□□□ -0.13
CAPN1-201ENST00000279247 NDPQ00604 133 aa14.24□□□□□ -0.13
CAPN1-201ENST00000279247 CXorf65A6NEN9 183 aa14.24□□□□□ -0.13
CAPN1-201ENST00000279247 PCP4L1A6NKN8 68 aa14.24□□□□□ -0.13
CAPN1-201ENST00000279247 MAS1LP35410 378 aa14.24□□□□□ -0.13
CAPN1-201ENST00000279247 NDUFA6P56556 154 aa14.24□□□□□ -0.13
CAPN1-201ENST00000279247 BPIFB3P59826 476 aa14.24□□□□□ -0.13
CAPN1-201ENST00000279247 PAXXQ9BUH6 204 aa14.24□□□□□ -0.13
CAPN1-201ENST00000279247 TMEM167BQ9NRX6 74 aa14.24□□□□□ -0.13
CAPN1-201ENST00000279247 IGHV4-61A0A0C4DH41 118 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 RANP62826 216 aaKnown RBP14.23□□□□□ -0.13
CAPN1-201ENST00000279247 TMEM249Q2WGJ8 235 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 TIGITQ495A1 244 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 PDZD11Q5EBL8 140 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 BRD3OSQ6XYD6 125 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 FAM167A-AS1Q96KT0 104 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 PSMB11A5LHX3 300 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 FAM168AQ92567 244 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 OVOL3O00110 214 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 S100PP25815 95 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 PDLIM4P50479 330 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 HIST2H2BCQ6DN03 193 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 CCDC144NLQ6NUI1 221 aa14.23□□□□□ -0.13
CAPN1-201ENST00000279247 RBM14Q96PK6 669 aaKnown RBP14.22□□□□□ -0.13
CAPN1-201ENST00000279247 PRELID1Q9Y255 219 aa14.22□□□□□ -0.13
CAPN1-201ENST00000279247 MDFIC2A0A1B0GVS7 189 aa14.22□□□□□ -0.13
CAPN1-201ENST00000279247 SLC17A3O00476 420 aa14.22□□□□□ -0.13
CAPN1-201ENST00000279247 PSG1P11464 419 aa14.22□□□□□ -0.13
CAPN1-201ENST00000279247 PAX2Q02962 417 aa14.22□□□□□ -0.13
CAPN1-201ENST00000279247 OR1L4Q8NGR5 311 aa14.22□□□□□ -0.13
CAPN1-201ENST00000279247 PFDN5Q99471 154 aa14.22□□□□□ -0.13
CAPN1-201ENST00000279247 CTDSP1Q9GZU7 261 aa14.22□□□□□ -0.13
CAPN1-201ENST00000279247 TRAV34A0A0B4J273 112 aa14.21□□□□□ -0.13
CAPN1-201ENST00000279247 IGHV3-35A0A0C4DH35 117 aa14.21□□□□□ -0.13
CAPN1-201ENST00000279247 THAP8Q8NA92 274 aa14.21□□□□□ -0.13
CAPN1-201ENST00000279247 OR51M1Q9H341 326 aa14.21□□□□□ -0.13
CAPN1-201ENST00000279247 CRYGCP07315 174 aa14.21□□□□□ -0.13
CAPN1-201ENST00000279247 SELENOTP62341 195 aa14.21□□□□□ -0.13
CAPN1-201ENST00000279247 RNF5Q99942 180 aa14.21□□□□□ -0.13
CAPN1-201ENST00000279247 RASL11BQ9BPW5 248 aa14.21□□□□□ -0.13
CAPN1-201ENST00000279247 IGHV3OR16-8A0A075B7F1 116 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 HELTA6NFD8 242 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 MGST1P10620 155 aaKnown RBP14.2□□□□□ -0.14
CAPN1-201ENST00000279247 GNG5P63218 68 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 CENPWQ5EE01 88 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 TMEM219Q86XT9 240 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 TMEM116Q8NCL8 245 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 ARPC1AQ92747 370 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 TMEM242Q9NWH2 141 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 FASNP49327 2511 aaKnown RBP14.2□□□□□ -0.14
CAPN1-201ENST00000279247 NAV2Q8IVL1 2488 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 I3L2K1 104 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 K7EN84 100 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 CORTO00230 105 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms