RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 IGHV3-35A0A0C4DH35 117 aa20.96■□□□□ 0.95
CHMP4B-201ENST00000217402 LINC01619G3V211 115 aa20.96■□□□□ 0.95
CHMP4B-201ENST00000217402 NUPL2O15504 423 aaKnown RBP20.96■□□□□ 0.95
CHMP4B-201ENST00000217402 CTSGP08311 255 aa20.96■□□□□ 0.95
CHMP4B-201ENST00000217402 OR10J1P30954 320 aa20.96■□□□□ 0.95
CHMP4B-201ENST00000217402 ADMP35318 185 aa20.96■□□□□ 0.95
CHMP4B-201ENST00000217402 ZNF616Q08AN1 781 aa20.96■□□□□ 0.95
CHMP4B-201ENST00000217402 TMEM147Q9BVK8 224 aa20.96■□□□□ 0.95
CHMP4B-201ENST00000217402 UQCC1Q9NVA1 299 aa20.96■□□□□ 0.95
CHMP4B-201ENST00000217402 C1QBP02746 253 aa20.96■□□□□ 0.95
CHMP4B-201ENST00000217402 UBE2L5PA0A1B0GUS4 154 aa20.95■□□□□ 0.94
CHMP4B-201ENST00000217402 ZFP92A6NM28 416 aa20.95■□□□□ 0.94
CHMP4B-201ENST00000217402 PFDN1O60925 122 aa20.95■□□□□ 0.94
CHMP4B-201ENST00000217402 GGCTO75223 188 aaKnown RBP20.95■□□□□ 0.94
CHMP4B-201ENST00000217402 IGLC1P0CG04 106 aa20.95■□□□□ 0.94
CHMP4B-201ENST00000217402 TIGITQ495A1 244 aa20.95■□□□□ 0.94
CHMP4B-201ENST00000217402 SPSB3Q6PJ21 355 aa20.95■□□□□ 0.94
CHMP4B-201ENST00000217402 MFFQ9GZY8 342 aa20.95■□□□□ 0.94
CHMP4B-201ENST00000217402 IGKV1OR2-108A0A075B7D4 117 aa20.94■□□□□ 0.94
CHMP4B-201ENST00000217402 FNDC10F2Z333 226 aa20.94■□□□□ 0.94
CHMP4B-201ENST00000217402 OR2C1O95371 312 aa20.94■□□□□ 0.94
CHMP4B-201ENST00000217402 HOXD3P31249 432 aaPredicted RBP20.94■□□□□ 0.94
CHMP4B-201ENST00000217402 SLURP1P55000 103 aa20.94■□□□□ 0.94
CHMP4B-201ENST00000217402 RPEL1Q2QD12 228 aa20.94■□□□□ 0.94
CHMP4B-201ENST00000217402 TREML4Q6UXN2 200 aa20.94■□□□□ 0.94
CHMP4B-201ENST00000217402 OR4F17Q8NGA8 305 aa20.94■□□□□ 0.94
CHMP4B-201ENST00000217402 OR4F4Q96R69 305 aa20.94■□□□□ 0.94
CHMP4B-201ENST00000217402 NPVFQ9HCQ7 196 aa20.94■□□□□ 0.94
CHMP4B-201ENST00000217402 FBXL17Q9UF56 701 aa20.94■□□□□ 0.94
CHMP4B-201ENST00000217402 SCGB2A1O75556 95 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 IGKV1-17P01599 117 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 ATP6V1FQ16864 119 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 ZFP69Q49AA0 526 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 TMEM144Q7Z5S9 345 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 IGKV1D-37A0A075B6S9 117 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 TRAV30A0A087WSZ9 112 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 HMSDA8MTL9 139 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 PF4P02776 101 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 FHL3Q13643 280 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 VWC2Q2TAL6 325 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 ATP5SQ99766 215 aa20.93■□□□□ 0.94
CHMP4B-201ENST00000217402 TSPAN15O95858 294 aa20.92■□□□□ 0.94
CHMP4B-201ENST00000217402 ZP3P21754 424 aa20.92■□□□□ 0.94
CHMP4B-201ENST00000217402 THAP8Q8NA92 274 aa20.92■□□□□ 0.94
CHMP4B-201ENST00000217402 M0QZ24 198 aa20.91■□□□□ 0.94
CHMP4B-201ENST00000217402 MYCNOSP40205 109 aa20.91■□□□□ 0.94
CHMP4B-201ENST00000217402 EIF2B2P49770 351 aaKnown RBP20.91■□□□□ 0.94
CHMP4B-201ENST00000217402 TEPPQ6URK8 271 aa20.91■□□□□ 0.94
CHMP4B-201ENST00000217402 WFDC1Q9HC57 220 aa20.91■□□□□ 0.94
CHMP4B-201ENST00000217402 ZNF90Q03938 601 aa20.9■□□□□ 0.94
CHMP4B-201ENST00000217402 CXCL2P19875 107 aa20.89■□□□□ 0.94
CHMP4B-201ENST00000217402 RELQ04864 619 aaPredicted RBP20.89■□□□□ 0.94
CHMP4B-201ENST00000217402 HYLS1Q96M11 299 aa20.89■□□□□ 0.94
CHMP4B-201ENST00000217402 WDR83OSQ9Y284 106 aa20.89■□□□□ 0.94
CHMP4B-201ENST00000217402 ANK2Q01484 3957 aa20.89■□□□□ 0.94
CHMP4B-201ENST00000217402 DFFBO76075 338 aa20.89■□□□□ 0.93
CHMP4B-201ENST00000217402 OR2F1Q13607 317 aa20.89■□□□□ 0.93
CHMP4B-201ENST00000217402 ZNF414Q96IQ9 312 aa20.89■□□□□ 0.93
CHMP4B-201ENST00000217402 TRGV9Q99603 122 aa20.89■□□□□ 0.93
CHMP4B-201ENST00000217402 LSM4Q9Y4Z0 139 aaKnown RBP20.89■□□□□ 0.93
CHMP4B-201ENST00000217402 IGHV3OR16-8A0A075B7F1 116 aa20.88■□□□□ 0.93
CHMP4B-201ENST00000217402 YIF1AO95070 293 aa20.88■□□□□ 0.93
CHMP4B-201ENST00000217402 FGF7P21781 194 aa20.88■□□□□ 0.93
CHMP4B-201ENST00000217402 SYNJ2BPP57105 145 aa20.88■□□□□ 0.93
CHMP4B-201ENST00000217402 ZNF345Q14585 488 aa20.88■□□□□ 0.93
CHMP4B-201ENST00000217402 BTNL8Q6UX41 500 aa20.88■□□□□ 0.93
CHMP4B-201ENST00000217402 WNK1Q9H4A3 2382 aa20.87■□□□□ 0.93
CHMP4B-201ENST00000217402 ZNF600Q6ZNG1 722 aa20.87■□□□□ 0.93
CHMP4B-201ENST00000217402 DLX4Q92988 240 aaPredicted RBP20.87■□□□□ 0.93
CHMP4B-201ENST00000217402 MGST2Q99735 147 aa20.87■□□□□ 0.93
CHMP4B-201ENST00000217402 PUS1Q9Y606 427 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHMP4B-201ENST00000217402 ZNF320A2RRD8 509 aa20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 YPEL3P61236 119 aaPredicted RBP20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 UNQ9165/PRO28630Q6UXU0 137 aa20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 KCNRGQ8N5I3 272 aa20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 RCC1LQ96I51 464 aaKnown RBP20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 IFNA5P01569 189 aa20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 RD3LP0DJH9 198 aa20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 PSG1P11464 419 aa20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 KLF5Q13887 457 aaPredicted RBP20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 FAM106AQ4KMX7 169 aa20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 GPHB5Q86YW7 130 aa20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 SPATA3Q8NHX4 192 aa20.86■□□□□ 0.93
CHMP4B-201ENST00000217402 NDUFA4O00483 81 aa20.85■□□□□ 0.93
CHMP4B-201ENST00000217402 AGPAT2O15120 278 aa20.85■□□□□ 0.93
CHMP4B-201ENST00000217402 TOMM40O96008 361 aa20.85■□□□□ 0.93
CHMP4B-201ENST00000217402 GATA2P23769 480 aaPredicted RBP20.85■□□□□ 0.93
CHMP4B-201ENST00000217402 CYP2G1PQ6ZSU1 146 aa20.85■□□□□ 0.93
CHMP4B-201ENST00000217402 C1QL4Q86Z23 238 aa20.85■□□□□ 0.93
CHMP4B-201ENST00000217402 C20orf24Q9BUV8 137 aa20.85■□□□□ 0.93
CHMP4B-201ENST00000217402 WDR61Q9GZS3 305 aaKnown RBP20.85■□□□□ 0.93
CHMP4B-201ENST00000217402 FABP1P07148 127 aa20.84■□□□□ 0.93
CHMP4B-201ENST00000217402 CAMLGP49069 296 aa20.84■□□□□ 0.93
CHMP4B-201ENST00000217402 NKX2-5P52952 324 aaPredicted RBP20.84■□□□□ 0.93
CHMP4B-201ENST00000217402 TOMM20LQ6UXN7 152 aa20.84■□□□□ 0.93
CHMP4B-201ENST00000217402 TMEM182Q6ZP80 229 aaPredicted RBP20.84■□□□□ 0.93
CHMP4B-201ENST00000217402 LINC00482Q8N8I6 264 aa20.84■□□□□ 0.93
CHMP4B-201ENST00000217402 Q8WTZ3 238 aa20.84■□□□□ 0.93
CHMP4B-201ENST00000217402 ARL6Q9H0F7 186 aa20.84■□□□□ 0.93
CHMP4B-201ENST00000217402 A0A0D9SG52 128 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms