RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 UBAC2Q8NBM4 344 aa9.34□□□□□ -0.91
LINC00963-217ENST00000624009 OR4X1Q8NH49 305 aa9.34□□□□□ -0.91
LINC00963-217ENST00000624009 RNASEH2CQ8TDP1 164 aaKnown RBP9.34□□□□□ -0.91
LINC00963-217ENST00000624009 GPR146Q96CH1 333 aa9.34□□□□□ -0.91
LINC00963-217ENST00000624009 WDR89Q96FK6 387 aaPredicted RBP9.34□□□□□ -0.91
LINC00963-217ENST00000624009 GINS3Q9BRX5 216 aa9.34□□□□□ -0.91
LINC00963-217ENST00000624009 TRAV30A0A087WSZ9 112 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 IGHV3-21A0A0B4J1V1 117 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 IGHV3-35A0A0C4DH35 117 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 A0A1B0GU03 582 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 RPS10-NUDT3A0A1W2PQS6 291 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 OR11H12B2RN74 326 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 CLN5O75503 358 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 SLC25A4P12235 298 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 AKR1C4P17516 323 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 EDN2P20800 178 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 RBMS2Q15434 407 aaKnown RBP9.33□□□□□ -0.92
LINC00963-217ENST00000624009 HAGHQ16775 308 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 ETFRF1Q6IPR1 90 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 ZNF600Q6ZNG1 722 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 PINX1Q96BK5 328 aaKnown RBP9.33□□□□□ -0.92
LINC00963-217ENST00000624009 ZNF414Q96IQ9 312 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 HIPK2Q9H2X6 1198 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 HSPB7Q9UBY9 170 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 SMPXQ9UHP9 88 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 U3KQ87 197 aa9.33□□□□□ -0.92
LINC00963-217ENST00000624009 TRAV14DV4A0A0A6YYC5 116 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 IGHV7-4-1A0A0J9YVY3 117 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 C3orf84H3BNL1 204 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 TMEM50AO95807 157 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 CD7P09564 240 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 TNFRSF9Q07011 255 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 SMCO1Q147U7 214 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 CNPY1Q3B7I2 92 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 SPINK9Q5DT21 86 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 LINC00299Q6ZSB3 139 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 TMEM116Q8NCL8 245 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 SLC24A4Q8NFF2 622 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 OR52B4Q8NGK2 314 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 CITED4Q96RK1 184 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 C7orf50Q9BRJ6 194 aaKnown RBP9.32□□□□□ -0.92
LINC00963-217ENST00000624009 C20orf24Q9BUV8 137 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 HEYLQ9NQ87 328 aaPredicted RBP9.32□□□□□ -0.92
LINC00963-217ENST00000624009 CSMD3Q7Z407 3707 aa9.32□□□□□ -0.92
LINC00963-217ENST00000624009 OR4C46A6NHA9 309 aa9.31□□□□□ -0.92
LINC00963-217ENST00000624009 CEBPZOSA8MTT3 80 aa9.31□□□□□ -0.92
LINC00963-217ENST00000624009 FAM90A26D6RGX4 464 aa9.31□□□□□ -0.92
LINC00963-217ENST00000624009 OPRK1P41145 380 aa9.31□□□□□ -0.92
LINC00963-217ENST00000624009 CMC4P56277 68 aaPredicted RBP9.31□□□□□ -0.92
LINC00963-217ENST00000624009 FNDC4Q9H6D8 234 aaPredicted RBP9.31□□□□□ -0.92
LINC00963-217ENST00000624009 SRD5A3Q9H8P0 318 aa9.31□□□□□ -0.92
LINC00963-217ENST00000624009 TMED3Q9Y3Q3 217 aa9.31□□□□□ -0.92
LINC00963-217ENST00000624009 CHEK1O14757 476 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 PITX3O75364 302 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 YIF1AO95070 293 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 SCAF4O95104 1147 aaKnown RBP9.3□□□□□ -0.92
LINC00963-217ENST00000624009 INPP1P49441 399 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 TRIQKQ629K1 86 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 TOMM20LQ6UXN7 152 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 LYZL2Q7Z4W2 148 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 TMED4Q7Z7H5 227 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 CENPSQ8N2Z9 138 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 DEFB125Q8N687 156 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 RHPN1-AS1Q9BWJ2 59 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 VSIRQ9H7M9 311 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 ZFAND3Q9H8U3 227 aa9.3□□□□□ -0.92
LINC00963-217ENST00000624009 TRAV2A0A0B4J234 112 aa9.29□□□□□ -0.92
LINC00963-217ENST00000624009 A0A1W2PS18 150 aa9.29□□□□□ -0.92
LINC00963-217ENST00000624009 CENPXA8MT69 81 aa9.29□□□□□ -0.92
LINC00963-217ENST00000624009 NDUFB6O95139 128 aa9.29□□□□□ -0.92
LINC00963-217ENST00000624009 SFT2D2O95562 160 aa9.29□□□□□ -0.92
LINC00963-217ENST00000624009 NPY1RP25929 384 aa9.29□□□□□ -0.92
LINC00963-217ENST00000624009 YPEL3P61236 119 aaPredicted RBP9.29□□□□□ -0.92
LINC00963-217ENST00000624009 PRSS54Q6PEW0 395 aa9.29□□□□□ -0.92
LINC00963-217ENST00000624009 OR1S2Q8NGQ3 325 aa9.29□□□□□ -0.92
LINC00963-217ENST00000624009 DTD1Q8TEA8 209 aa9.29□□□□□ -0.92
LINC00963-217ENST00000624009 TMEM231Q9H6L2 316 aa9.29□□□□□ -0.92
LINC00963-217ENST00000624009 PUS1Q9Y606 427 aaKnown RBP eCLIP9.29□□□□□ -0.92
LINC00963-217ENST00000624009 RBMY1BA6NDE4 496 aaKnown RBP9.28□□□□□ -0.92
LINC00963-217ENST00000624009 RBMY1EA6NEQ0 496 aaKnown RBP9.28□□□□□ -0.92
LINC00963-217ENST00000624009 MED6O75586 246 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 IGKV1-17P01599 117 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 IGHV3-48P01763 117 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 RBMY1DP0C7P1 496 aaKnown RBP9.28□□□□□ -0.92
LINC00963-217ENST00000624009 PPP1R1AQ13522 171 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 BAK1Q16611 211 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 FAM90A2PQ658T7 463 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 OR1S1Q8NH92 325 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 MUC7Q8TAX7 377 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 TMEM170AQ8WVE7 144 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 CIB3Q96Q77 187 aaPredicted RBP9.28□□□□□ -0.92
LINC00963-217ENST00000624009 RNF2Q99496 336 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 SDHCQ99643 169 aaPredicted RBP9.28□□□□□ -0.92
LINC00963-217ENST00000624009 EDA2RQ9HAV5 297 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 AGRNO00468 2067 aa9.28□□□□□ -0.92
LINC00963-217ENST00000624009 LOC102724200A0A096LPH7 203 aaPredicted RBP9.27□□□□□ -0.93
LINC00963-217ENST00000624009 KIR2DL5BA0A0G2JN68 375 aa9.27□□□□□ -0.93
LINC00963-217ENST00000624009 KIR2DL5BA0A0G2JPC4 375 aa9.27□□□□□ -0.93
LINC00963-217ENST00000624009 IGLC1P0CG04 106 aa9.27□□□□□ -0.93
LINC00963-217ENST00000624009 VAMP1P23763 118 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms