RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 NDUFA3O95167 84 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 MMP17Q9ULZ9 603 aa7.44□□□□□ -1.22
TTC28-208ENST00000612946 IGHV3-15A0A0B4J1V0 119 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 TRAV17A0A0B4J275 112 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 LDLRAD4O15165 306 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 IFI27L2Q9H2X8 130 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 TRGV5A0A0B4J1U4 118 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 SSTR5P35346 364 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 SLC25A47Q6Q0C1 308 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 RFLNBQ8N5W9 214 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 C8orf44Q96CB5 159 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 SCTP09683 121 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 ZNF688P0C7X2 276 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 DUSP2Q05923 314 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 TMEM86BQ8N661 226 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 PTPN13Q12923 2485 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 DMRTC1Q5HYR2 192 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 SPATA31B1PQ5VZV4 182 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 FNDC1Q4ZHG4 1894 aaPredicted RBP7.43□□□□□ -1.22
TTC28-208ENST00000612946 CBLN3Q6UW01 205 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 DEFB108BQ8NET1 73 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 MS4A4AQ96JQ5 239 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 J3QRE1 110 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 OR2H2O95918 312 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 LINC01590Q5TEZ4 76 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 GNRHR2Q96P88 292 aa7.43□□□□□ -1.22
TTC28-208ENST00000612946 IGLC2P0DOY2 106 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 IGLC3P0DOY3 106 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 PCSK4Q6UW60 755 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 ABHD17AQ96GS6 310 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 TMUB1Q9BVT8 246 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 C3orf79P0CE67 100 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 ID3Q02535 119 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 LHFPL6Q9Y693 200 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 hCG_38984A0A1B0GV85 526 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 MESP2Q0VG99 397 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 ZNF56Q15929 161 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 VKORC1Q9BQB6 163 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 A0A1W2PR80 420 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 NPFFO15130 113 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 ZG16O60844 167 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 COX8AP10176 69 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 SNRPD3P62318 126 aaKnown RBP7.42□□□□□ -1.22
TTC28-208ENST00000612946 MORN2Q502X0 79 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 COA6Q5JTJ3 125 aaKnown RBP7.42□□□□□ -1.22
TTC28-208ENST00000612946 LINC00696Q6ZRV3 163 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 FAM57AQ8TBR7 257 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 C18orf15Q96N68 181 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 DUSP15Q9H1R2 295 aaPredicted RBP7.42□□□□□ -1.22
TTC28-208ENST00000612946 SPRY3O43610 288 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 LINC00271P0C7V0 271 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 WFDC6Q9BQY6 131 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 SLC50A1Q9BRV3 221 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 SPTY2D1-AS1A0A0U1RR47 76 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 TIAF1O95411 115 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 FOXQ1Q9C009 403 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 CYTL1Q9NRR1 136 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 TSSC4Q9Y5U2 329 aaPredicted RBP7.42□□□□□ -1.22
TTC28-208ENST00000612946 IGHV3-20A0A0C4DH32 117 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 MPV17P39210 176 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 DYNLRB2Q8TF09 96 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 ATP6V0E2Q8NHE4 81 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 ZPLD1Q8TCW7 415 aa7.42□□□□□ -1.22
TTC28-208ENST00000612946 IL18BPO95998 194 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 CCL1P22362 96 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 NAV3Q8IVL0 2385 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 EXPH5Q8NEV8 1989 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 ZNF831Q5JPB2 1677 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 EVI2AP22794 236 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 CGAP01215 116 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 CRPP02741 224 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 RRN3P1Q2M238 152 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 THSD7AQ9UPZ6 1657 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 RNASE1P07998 156 aaKnown RBP7.41□□□□□ -1.22
TTC28-208ENST00000612946 SMIM20Q8N5G0 67 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 LIFP15018 202 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 A0A087X0K7 114 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 PVRIGQ6DKI7 326 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 WDR82Q6UXN9 313 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 Q9H3A6 140 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 A0A1W2PQF6 199 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 DTX1Q86Y01 620 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 TRAV21A0A0B4J279 112 aa7.41□□□□□ -1.22
TTC28-208ENST00000612946 CTGFP29279 349 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 SLAQ13239 276 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 WFDC8Q8IUA0 241 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 HES7Q9BYE0 225 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 METTL12A8MUP2 240 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 SNAI2O43623 268 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 CT62P0C5K7 136 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 FAM106CPP0CH98 169 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 REG1BP48304 166 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 PDLIM4P50479 330 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 SSPNQ14714 243 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 PDCD1Q15116 288 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 TNFRSF18Q9Y5U5 241 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 ADAMTS9Q9P2N4 1935 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 TM4SF4P48230 202 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 ADCYAP1P18509 176 aa7.4□□□□□ -1.22
TTC28-208ENST00000612946 PPP1R27Q86WC6 154 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms