RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 SUB1P53999 127 aaKnown RBP eCLIP4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 BPIFB3P59826 476 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 RAB14P61106 215 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 RHOGP84095 191 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PRR20EP86478 221 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PRR20CP86479 221 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PRR20DP86480 221 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PRR20BP86481 221 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PRR20AP86496 221 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 AANATQ16613 207 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TMEM41BQ5BJD5 291 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 AKR1C8PQ5T2L2 129 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CYP2G1PQ6ZSU1 146 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TMEM144Q7Z5S9 345 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 ZNF329Q86UD4 541 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 RPP25LQ8N5L8 163 aaKnown RBP4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 THAP8Q8NA92 274 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 GATAD1Q8WUU5 269 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 GNPNAT1Q96EK6 184 aaPredicted RBP4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 SRSF8Q9BRL6 282 aaKnown RBP4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PSMG3Q9BT73 122 aaPredicted RBP4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 GGACTQ9BVM4 153 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TMPRSS5Q9H3S3 457 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PRDM13Q9H4Q3 707 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 NPVFQ9HCQ7 196 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 ZNF355PQ9NSJ1 428 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 VPS13CQ709C8 3753 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 YLPM1P49750 1951 aaKnown RBP4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 NOTCH2Q04721 2471 aa4.8□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CRYBG3Q68DQ2 2970 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CENPEQ02224 2701 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 ANK3Q12955 4377 aaKnown RBP4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TACC2O95359 2948 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TRAV5A0A0B4J249 113 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 BTBD17A6NE02 478 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 ZFP92A6NM28 416 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TSPAN15O95858 294 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 IGHV3-11P01762 117 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 SNRPCP09234 159 aaKnown RBP4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 IGLC1P0CG04 106 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PRB4P10163 310 aaPredicted RBP4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CD99P14209 185 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PPIFP30405 207 aaKnown RBP4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CRIP2P52943 208 aaPredicted RBP4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 B2MP61769 119 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CFHR3Q02985 330 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TEPPQ6URK8 271 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PATE2Q6UY27 113 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 MIR17HGQ75NE6 70 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CENPVQ7Z7K6 275 aaPredicted RBP4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 MRPL41Q8IXM3 137 aaKnown RBP4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 ZNF709Q8N972 641 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 OR10G4Q8NGN3 311 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 OR10G9Q8NGN4 311 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 OR10G7Q8NGN6 311 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 OR5R1Q8NH85 324 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 RNF141Q8WVD5 230 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CCDC140Q96MF4 163 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 OR5B12Q96R08 314 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CITED4Q96RK1 184 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CHRDL1Q9BU40 450 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 SLC39A9Q9NUM3 307 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PITPNC1Q9UKF7 332 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TIMM9Q9Y5J7 89 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CSPG4Q6UVK1 2322 aa4.79□□□□□ -1.64
RNU4ATAC-201ENST00000580972 SVEP1Q4LDE5 3571 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TRBV9A0A0B4J1U6 114 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TCRBV4S1A1TA0A5B7 111 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 PSMB11A5LHX3 300 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 MAP1LC3B2A6NCE7 125 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 FAM181BA6NEQ2 426 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 OR2T8A6NH00 312 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 FNDC10F2Z333 226 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 HSPB1P04792 205 aaKnown RBP4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 IGF1P05019 195 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 SRD5A1P18405 259 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 GPR183P32249 361 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 ADMP35318 185 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 RPL29P47914 159 aaKnown RBP4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 ATP5IP56385 69 aaPredicted RBP4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TPPP2P59282 170 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 C15orf32Q32M92 178 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 Q56UQ5 140 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 LEMD1Q68G75 181 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 EIF5AL1Q6IS14 154 aaKnown RBP4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 C18orf65Q6ZTR6 163 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 C16orf82Q7Z2V1 217 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 HSD17B13Q7Z5P4 300 aaPredicted RBP4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 TMEM116Q8NCL8 245 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 OR4X1Q8NH49 305 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 ZNF502Q8TBZ5 544 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 SFT2D1Q8WV19 159 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 CACNG8Q8WXS5 425 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 RAB24Q969Q5 203 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 UHRF2Q96PU4 802 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 RARRES2Q99969 163 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 SCRT1Q9BWW7 348 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 MAP1LC3BQ9GZQ8 125 aa4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 SEPSECSQ9HD40 501 aaKnown RBP4.78□□□□□ -1.64
RNU4ATAC-201ENST00000580972 C21orf62Q9NYP8 219 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 1151.6 ms