RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 TNFRSF1AP19438 455 aa3.68□□□□□ -1.82
CDH8-205ENST00000577730 PLEKHB2Q96CS7 222 aa3.68□□□□□ -1.82
CDH8-205ENST00000577730 MRPL20Q9BYC9 149 aaKnown RBP3.68□□□□□ -1.82
CDH8-205ENST00000577730 SLC25A39Q9BZJ4 359 aaPredicted RBP3.68□□□□□ -1.82
CDH8-205ENST00000577730 H0Y8X5 98 aa3.68□□□□□ -1.82
CDH8-205ENST00000577730 ATOX1O00244 68 aa3.68□□□□□ -1.82
CDH8-205ENST00000577730 EFEMP2O95967 443 aa3.68□□□□□ -1.82
CDH8-205ENST00000577730 CTGFP29279 349 aa3.68□□□□□ -1.82
CDH8-205ENST00000577730 ZNF646O15015 1829 aaPredicted RBP3.68□□□□□ -1.82
CDH8-205ENST00000577730 SMIM27A0A1W2PRY6 76 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 FAM90A9PA6NNJ1 464 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 COL9A1P20849 921 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 FAM231DQ6ZW35 169 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 OVOL2Q9BRP0 275 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 ANAPC10Q9UM13 185 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 MYMXA0A1B0GTQ4 84 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 SSC5DA1L4H1 1573 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 FOXI3A8MTJ6 420 aaPredicted RBP3.67□□□□□ -1.82
CDH8-205ENST00000577730 C4orf51C9J302 202 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 TNFRSF4P43489 277 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 SPEM2Q0P670 501 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 MRPL55Q7Z7F7 128 aaKnown RBP3.67□□□□□ -1.82
CDH8-205ENST00000577730 WIPF2Q8TF74 440 aaPredicted RBP3.67□□□□□ -1.82
CDH8-205ENST00000577730 SSC4DQ8WTU2 575 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 ZNF501Q96CX3 271 aaPredicted RBP3.67□□□□□ -1.82
CDH8-205ENST00000577730 C20orf78Q9BR46 151 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 TMEM243Q9BU79 118 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 TRAV40A0A0B4J280 105 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 IGKV1-9A0A0C4DH69 117 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 FAM236AA0A1B0GUQ0 79 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 FAM236BA0A1B0GV22 79 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 NCR2O95944 276 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 NEGR1Q7Z3B1 354 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 ZNF492Q9P255 531 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 H0YJW9 148 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 CCL7P80098 99 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 QRFPP83859 136 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 ZC2HC1AQ96GY0 325 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 CARD19Q96LW7 228 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 MYH11P35749 1972 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 SPAARA0A1B0GVQ0 90 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 SMIM9A6NGZ8 99 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 SPRY3O43610 288 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 TCRAP04437 139 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 CELA3BP08861 270 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 RBM3P98179 157 aaKnown RBP3.67□□□□□ -1.82
CDH8-205ENST00000577730 HCP5Q6MZN7 132 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 FAM214BQ7L5A3 538 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 TMEM158Q8WZ71 300 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 SPANXB1Q9NS25 103 aaPredicted RBP3.67□□□□□ -1.82
CDH8-205ENST00000577730 PROCRQ9UNN8 238 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 PKD1L3Q7Z443 1732 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 TCRBV4S1A1TA0A5B7 111 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 FAM90A27PA6NNH2 459 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 C12orf77C9JDV5 145 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 GFERP55789 205 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 LRRC75A-AS1Q8N1F1 130 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 FAM57AQ8TBR7 257 aa3.67□□□□□ -1.82
CDH8-205ENST00000577730 TRAV13-1A0A0B4J241 112 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 LILRA5A6NI73 299 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 WNT2P09544 360 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 HLA-DMBP28068 263 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 TM4SF19Q96DZ7 209 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 NAV1Q8NEY1 1877 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 M0R1B8 84 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 IGKV1-5P01602 117 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 LYZL1Q6UWQ5 148 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 ZNF747Q9BV97 191 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 PKIGQ9Y2B9 76 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 LOXL2Q9Y4K0 774 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 LY75O60449 1722 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 IGKV1-8A0A0C4DH67 115 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 SHISA5Q8N114 240 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 PRDM14Q9GZV8 571 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 FSCN3Q9NQT6 498 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 PRO1854Q9UHT4 67 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 TJP1Q07157 1748 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 WNK3Q9BYP7 1800 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 ATP5G1P05496 136 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 LINC00271P0C7V0 271 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 MPV17P39210 176 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 SUMO2P61956 95 aaKnown RBP3.66□□□□□ -1.82
CDH8-205ENST00000577730 LINC01545Q5VT33 79 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 C11orf52Q96A22 123 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 PLA2G2EQ9NZK7 142 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 PEBP1P30086 187 aaKnown RBP3.66□□□□□ -1.82
CDH8-205ENST00000577730 NOGQ13253 232 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 HIGD1BQ9P298 99 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 PILRAQ9UKJ1 303 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 SCN4AP35499 1836 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 CRYGCP07315 174 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 CD27P26842 260 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 NPC2P61916 151 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 C17orf99Q6UX52 265 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 CALYQ9NYX4 217 aa3.66□□□□□ -1.82
CDH8-205ENST00000577730 BRK1Q8WUW1 75 aa3.65□□□□□ -1.82
CDH8-205ENST00000577730 DNAJC30Q96LL9 226 aa3.65□□□□□ -1.82
CDH8-205ENST00000577730 RNF7Q9UBF6 113 aa3.65□□□□□ -1.82
CDH8-205ENST00000577730 FGF6P10767 208 aa3.65□□□□□ -1.82
CDH8-205ENST00000577730 CNTFRP26992 372 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms