RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 TMEM147Q9BVK8 224 aa18.8■□□□□ 0.6
ATPAF1-213ENST00000574428 UBE2L5PA0A1B0GUS4 154 aa18.79■□□□□ 0.6
ATPAF1-213ENST00000574428 SMCO3A2RU48 225 aa18.79■□□□□ 0.6
ATPAF1-213ENST00000574428 MT-CO2P00403 227 aa18.79■□□□□ 0.6
ATPAF1-213ENST00000574428 DLK1P80370 383 aa18.79■□□□□ 0.6
ATPAF1-213ENST00000574428 RNF141Q8WVD5 230 aa18.79■□□□□ 0.6
ATPAF1-213ENST00000574428 SERTAD4Q9NUC0 356 aa18.79■□□□□ 0.6
ATPAF1-213ENST00000574428 UQCC1Q9NVA1 299 aa18.79■□□□□ 0.6
ATPAF1-213ENST00000574428 MFSD2BA6NFX1 497 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 I3L2K1 104 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 CYB5BO43169 146 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 TSPAN9O75954 239 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 DFFBO76075 338 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 ATP6V1FQ16864 119 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 EIF5AL1Q6IS14 154 aaKnown RBP18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 LRRC20Q8TCA0 184 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 GINS3Q9BRX5 216 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 K7EIM0 57 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 NDUFB8O95169 186 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 GPX4P36969 197 aaPredicted RBP18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 C10orf99Q6UWK7 81 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 GGACTQ9BVM4 153 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 MRPL36Q9P0J6 103 aaKnown RBP18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 FBXL7Q9UJT9 491 aa18.78■□□□□ 0.6
ATPAF1-213ENST00000574428 RHOGP84095 191 aa18.77■□□□□ 0.6
ATPAF1-213ENST00000574428 VWC2Q2TAL6 325 aa18.77■□□□□ 0.6
ATPAF1-213ENST00000574428 PLA2G2EQ9NZK7 142 aa18.77■□□□□ 0.6
ATPAF1-213ENST00000574428 S4R3C0 116 aa18.77■□□□□ 0.6
ATPAF1-213ENST00000574428 TRBV9A0A0B4J1U6 114 aa18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 HIST1H1BP16401 226 aaKnown RBP18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 GAMTQ14353 236 aa18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 CACNG8Q8WXS5 425 aa18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 ACY3Q96HD9 319 aa18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 THYN1Q9P016 225 aa18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 NIPBLQ6KC79 2804 aaeCLIP18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 IGLV1-40P01703 118 aa18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 AKR1C1Q04828 323 aa18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 ZNF266Q14584 549 aa18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 KLK9Q2XQG4 91 aa18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 SLC35E1Q96K37 410 aa18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 KLK9Q9UKQ9 250 aa18.76■□□□□ 0.59
ATPAF1-213ENST00000574428 PSMB11A5LHX3 300 aa18.75■□□□□ 0.59
ATPAF1-213ENST00000574428 TRGV3P03979 118 aa18.75■□□□□ 0.59
ATPAF1-213ENST00000574428 PF4V1P10720 104 aa18.75■□□□□ 0.59
ATPAF1-213ENST00000574428 TOR2AQ5JU69 321 aa18.75■□□□□ 0.59
ATPAF1-213ENST00000574428 ETFRF1Q6IPR1 90 aa18.75■□□□□ 0.59
ATPAF1-213ENST00000574428 LCNL1Q6ZST4 164 aa18.75■□□□□ 0.59
ATPAF1-213ENST00000574428 HSD17B11Q8NBQ5 300 aa18.75■□□□□ 0.59
ATPAF1-213ENST00000574428 KLK15Q9H2R5 256 aa18.75■□□□□ 0.59
ATPAF1-213ENST00000574428 IFNA5P01569 189 aa18.74■□□□□ 0.59
ATPAF1-213ENST00000574428 SPP1P10451 314 aa18.74■□□□□ 0.59
ATPAF1-213ENST00000574428 SULT1A2P50226 295 aa18.74■□□□□ 0.59
ATPAF1-213ENST00000574428 TPPP2P59282 170 aa18.74■□□□□ 0.59
ATPAF1-213ENST00000574428 C15orf32Q32M92 178 aa18.74■□□□□ 0.59
ATPAF1-213ENST00000574428 TREML4Q6UXN2 200 aa18.74■□□□□ 0.59
ATPAF1-213ENST00000574428 NECAP1Q8NC96 275 aa18.74■□□□□ 0.59
ATPAF1-213ENST00000574428 ZNF705EA8MWA4 302 aaPredicted RBP18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 I3L521 148 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 IGHG4P01861 327 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 SEC11BP0C7V7 166 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 RND2P52198 227 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 SLC35B1P78383 322 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 SH3BGRL3Q9H299 93 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 FNDC10F2Z333 226 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 H3BUA1 57 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 IGHV3-23P01764 117 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 FGF7P21781 194 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 ACSM6Q6P461 480 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 CENPVQ7Z7K6 275 aaPredicted RBP18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 NPIPB3Q92617 1050 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 WDR61Q9GZS3 305 aaKnown RBP18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 NPVFQ9HCQ7 196 aa18.73■□□□□ 0.59
ATPAF1-213ENST00000574428 RUNX1Q01196 453 aa18.72■□□□□ 0.59
ATPAF1-213ENST00000574428 SCGB1C1Q8TD33 95 aa18.72■□□□□ 0.59
ATPAF1-213ENST00000574428 C16orf95Q9H693 158 aa18.72■□□□□ 0.59
ATPAF1-213ENST00000574428 WDR83OSQ9Y284 106 aa18.72■□□□□ 0.59
ATPAF1-213ENST00000574428 BRI3O95415 125 aa18.71■□□□□ 0.59
ATPAF1-213ENST00000574428 PSMB8P28062 276 aa18.71■□□□□ 0.59
ATPAF1-213ENST00000574428 BTNL8Q6UX41 500 aa18.71■□□□□ 0.59
ATPAF1-213ENST00000574428 LINC01006Q8NI28 216 aa18.71■□□□□ 0.59
ATPAF1-213ENST00000574428 SAT2Q96F10 170 aaPredicted RBP18.71■□□□□ 0.59
ATPAF1-213ENST00000574428 RFNGQ9Y644 331 aa18.71■□□□□ 0.59
ATPAF1-213ENST00000574428 IGKV1OR2-108A0A075B7D4 117 aa18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 FAM223BA6NKX1 122 aa18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 NDUFA7O95182 113 aa18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 MDKP21741 143 aaPredicted RBP18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 TMEM144Q7Z5S9 345 aa18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 FAM223AQ8IWN6 122 aa18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 EIF4E3Q8N5X7 224 aaKnown RBP18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 RAB9AP51151 201 aa18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 TEX38Q6PEX7 206 aa18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 TEPPQ6URK8 271 aa18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 TMEM116Q8NCL8 245 aa18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 RSG1Q9BU20 258 aa18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 C21orf62Q9NYP8 219 aa18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 LSM4Q9Y4Z0 139 aaKnown RBP18.7■□□□□ 0.58
ATPAF1-213ENST00000574428 ATP6V0CP27449 155 aa18.69■□□□□ 0.58
ATPAF1-213ENST00000574428 ATP5G2Q06055 141 aa18.69■□□□□ 0.58
ATPAF1-213ENST00000574428 KLHDC1Q8N7A1 406 aa18.69■□□□□ 0.58
ATPAF1-213ENST00000574428 VN1R17PQ8TDU5 208 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms