RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 CMC4P56277 68 aaPredicted RBP12.89□□□□□ -0.35
RPA1-203ENST00000571058 ZNF600Q6ZNG1 722 aa12.89□□□□□ -0.35
RPA1-203ENST00000571058 Q6ZRM9 215 aa12.89□□□□□ -0.35
RPA1-203ENST00000571058 IL17DQ8TAD2 202 aa12.89□□□□□ -0.35
RPA1-203ENST00000571058 LHFPL5Q8TAF8 219 aa12.89□□□□□ -0.35
RPA1-203ENST00000571058 RHPN1-AS1Q9BWJ2 59 aa12.89□□□□□ -0.35
RPA1-203ENST00000571058 CACNG5Q9UF02 275 aa12.89□□□□□ -0.35
RPA1-203ENST00000571058 DNAH7Q8WXX0 4024 aa12.88□□□□□ -0.35
RPA1-203ENST00000571058 IGHV3OR16-8A0A075B7F1 116 aa12.88□□□□□ -0.35
RPA1-203ENST00000571058 RPS10-NUDT3A0A1W2PQS6 291 aa12.88□□□□□ -0.35
RPA1-203ENST00000571058 CHEK1O14757 476 aa12.88□□□□□ -0.35
RPA1-203ENST00000571058 ZNF207O43670 478 aaKnown RBP12.88□□□□□ -0.35
RPA1-203ENST00000571058 IGHV3-48P01763 117 aa12.88□□□□□ -0.35
RPA1-203ENST00000571058 ANXA3P12429 323 aa12.88□□□□□ -0.35
RPA1-203ENST00000571058 OPRK1P41145 380 aa12.88□□□□□ -0.35
RPA1-203ENST00000571058 PYDC2Q56P42 97 aa12.88□□□□□ -0.35
RPA1-203ENST00000571058 NOXA1Q86UR1 476 aa12.88□□□□□ -0.35
RPA1-203ENST00000571058 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
RPA1-203ENST00000571058 TRAV30A0A087WSZ9 112 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 CLN5O75503 358 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 TMEM50AO95807 157 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 SULT1A3P0DMM9 295 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 SULT1A4P0DMN0 295 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 APOC4P55056 127 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 TMEM187Q14656 261 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 TOMM5Q8N4H5 51 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 OR4X1Q8NH49 305 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 TMEM230Q96A57 120 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 GPR146Q96CH1 333 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 ZNF414Q96IQ9 312 aa12.87□□□□□ -0.35
RPA1-203ENST00000571058 A0A0B4J2A0 478 aa12.86□□□□□ -0.35
RPA1-203ENST00000571058 CEBPZOSA8MTT3 80 aa12.86□□□□□ -0.35
RPA1-203ENST00000571058 AKR1C4P17516 323 aa12.86□□□□□ -0.35
RPA1-203ENST00000571058 PAFAH1B2P68402 229 aa12.86□□□□□ -0.35
RPA1-203ENST00000571058 KLF9Q13886 244 aaPredicted RBP12.86□□□□□ -0.35
RPA1-203ENST00000571058 C2orf83Q53S99 150 aa12.86□□□□□ -0.35
RPA1-203ENST00000571058 TOMM20LQ6UXN7 152 aa12.86□□□□□ -0.35
RPA1-203ENST00000571058 RNASEH2CQ8TDP1 164 aaKnown RBP12.86□□□□□ -0.35
RPA1-203ENST00000571058 TRIM63Q969Q1 353 aa12.86□□□□□ -0.35
RPA1-203ENST00000571058 RNF2Q99496 336 aa12.86□□□□□ -0.35
RPA1-203ENST00000571058 TMEM231Q9H6L2 316 aa12.86□□□□□ -0.35
RPA1-203ENST00000571058 SHPKQ9UHJ6 478 aa12.86□□□□□ -0.35
RPA1-203ENST00000571058 V9GYH0 126 aa12.86□□□□□ -0.35
RPA1-203ENST00000571058 SLC25A4P12235 298 aa12.85□□□□□ -0.35
RPA1-203ENST00000571058 CCR6P51684 374 aa12.85□□□□□ -0.35
RPA1-203ENST00000571058 NMSQ5H8A3 153 aa12.85□□□□□ -0.35
RPA1-203ENST00000571058 ETFRF1Q6IPR1 90 aa12.85□□□□□ -0.35
RPA1-203ENST00000571058 LGI3Q8N145 548 aa12.85□□□□□ -0.35
RPA1-203ENST00000571058 SLC24A4Q8NFF2 622 aa12.85□□□□□ -0.35
RPA1-203ENST00000571058 SLC25A21Q9BQT8 299 aaPredicted RBP12.85□□□□□ -0.35
RPA1-203ENST00000571058 RBM38Q9H0Z9 239 aaKnown RBP12.85□□□□□ -0.35
RPA1-203ENST00000571058 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
RPA1-203ENST00000571058 RETNQ9HD89 108 aa12.85□□□□□ -0.35
RPA1-203ENST00000571058 PUS1Q9Y606 427 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPA1-203ENST00000571058 KIR2DL5BA0A0G2JN68 375 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 KIR2DL5BA0A0G2JPC4 375 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 DUXBA0A1W2PPF3 345 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 A0A1W2PS18 150 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 UBE2CO00762 179 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 SUPT4H1P63272 117 aaKnown RBP12.84□□□□□ -0.35
RPA1-203ENST00000571058 SMCO1Q147U7 214 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 ODF3L2Q3SX64 289 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 TMEM128Q5BJH2 165 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 SPANXN2Q5MJ10 180 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 CCDC190Q86UF4 302 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 KIR2DL5AQ8N109 375 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 KIR2DL5BQ8NHK3 375 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 VSIRQ9H7M9 311 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 ZFAND3Q9H8U3 227 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 TP53TG1Q9Y2A0 90 aa12.84□□□□□ -0.35
RPA1-203ENST00000571058 NPPCP23582 126 aa12.83□□□□□ -0.36
RPA1-203ENST00000571058 ATP5IP56385 69 aaPredicted RBP12.83□□□□□ -0.36
RPA1-203ENST00000571058 TNFRSF9Q07011 255 aa12.83□□□□□ -0.36
RPA1-203ENST00000571058 ZNF79Q15937 498 aa12.83□□□□□ -0.36
RPA1-203ENST00000571058 FAM90A2PQ658T7 463 aa12.83□□□□□ -0.36
RPA1-203ENST00000571058 Q6ZWC4 215 aa12.83□□□□□ -0.36
RPA1-203ENST00000571058 NARS2Q96I59 477 aaKnown RBP12.83□□□□□ -0.36
RPA1-203ENST00000571058 METTL26Q96S19 204 aa12.83□□□□□ -0.36
RPA1-203ENST00000571058 HSPB7Q9UBY9 170 aa12.83□□□□□ -0.36
RPA1-203ENST00000571058 UBQLN2Q9UHD9 624 aa12.83□□□□□ -0.36
RPA1-203ENST00000571058 U3KQ87 197 aa12.83□□□□□ -0.36
RPA1-203ENST00000571058 TRAV2A0A0B4J234 112 aa12.82□□□□□ -0.36
RPA1-203ENST00000571058 A0A1B0GU03 582 aa12.82□□□□□ -0.36
RPA1-203ENST00000571058 NPY1RP25929 384 aa12.82□□□□□ -0.36
RPA1-203ENST00000571058 TCF24Q7RTU0 167 aa12.82□□□□□ -0.36
RPA1-203ENST00000571058 OR1S2Q8NGQ3 325 aa12.82□□□□□ -0.36
RPA1-203ENST00000571058 IGHV3-49A0A0A0MS15 119 aa12.81□□□□□ -0.36
RPA1-203ENST00000571058 LYZL2Q7Z4W2 148 aa12.81□□□□□ -0.36
RPA1-203ENST00000571058 TMED4Q7Z7H5 227 aa12.81□□□□□ -0.36
RPA1-203ENST00000571058 STPG3Q8N7X2 389 aa12.81□□□□□ -0.36
RPA1-203ENST00000571058 ST8SIA2Q92186 375 aa12.81□□□□□ -0.36
RPA1-203ENST00000571058 MRPL36Q9P0J6 103 aaKnown RBP12.81□□□□□ -0.36
RPA1-203ENST00000571058 DFFBO76075 338 aa12.8□□□□□ -0.36
RPA1-203ENST00000571058 IFNA10P01566 189 aa12.8□□□□□ -0.36
RPA1-203ENST00000571058 IGKV1-17P01599 117 aa12.8□□□□□ -0.36
RPA1-203ENST00000571058 CRYBB3P26998 211 aa12.8□□□□□ -0.36
RPA1-203ENST00000571058 YPEL3P61236 119 aaPredicted RBP12.8□□□□□ -0.36
RPA1-203ENST00000571058 MLANAQ16655 118 aa12.8□□□□□ -0.36
RPA1-203ENST00000571058 ZFAND6Q6FIF0 208 aa12.8□□□□□ -0.36
RPA1-203ENST00000571058 PRSS54Q6PEW0 395 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms