RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 A0A1B0GU03 582 aa9.55□□□□□ -0.88
SMG1-213ENST00000567737 IGKV3-20P01619 116 aa9.55□□□□□ -0.88
SMG1-213ENST00000567737 UCHL1P09936 223 aa9.55□□□□□ -0.88
SMG1-213ENST00000567737 CRYBB3P26998 211 aa9.55□□□□□ -0.88
SMG1-213ENST00000567737 AP2S1P53680 142 aaPredicted RBP9.55□□□□□ -0.88
SMG1-213ENST00000567737 LINC00315P59091 139 aa9.55□□□□□ -0.88
SMG1-213ENST00000567737 HAMPP81172 84 aa9.55□□□□□ -0.88
SMG1-213ENST00000567737 CNIH2Q6PI25 160 aa9.55□□□□□ -0.88
SMG1-213ENST00000567737 SECTM1Q8WVN6 248 aa9.55□□□□□ -0.88
SMG1-213ENST00000567737 CCL28Q9NRJ3 127 aa9.55□□□□□ -0.88
SMG1-213ENST00000567737 COMMD9Q9P000 198 aa9.55□□□□□ -0.88
SMG1-213ENST00000567737 SNAPC5O75971 98 aa9.54□□□□□ -0.88
SMG1-213ENST00000567737 MSMO1Q15800 293 aa9.54□□□□□ -0.88
SMG1-213ENST00000567737 RNASE12Q5GAN4 147 aaKnown RBP9.54□□□□□ -0.88
SMG1-213ENST00000567737 TPRA1Q86W33 373 aa9.54□□□□□ -0.88
SMG1-213ENST00000567737 ZBTB34Q8NCN2 500 aa9.54□□□□□ -0.88
SMG1-213ENST00000567737 NSG2Q9Y328 171 aa9.54□□□□□ -0.88
SMG1-213ENST00000567737 MARCH11A6NNE9 402 aa9.53□□□□□ -0.88
SMG1-213ENST00000567737 LYRM9A8MSI8 78 aa9.53□□□□□ -0.88
SMG1-213ENST00000567737 FAM90A26D6RGX4 464 aa9.53□□□□□ -0.88
SMG1-213ENST00000567737 PLA2G1BP04054 148 aaKnown RBP9.53□□□□□ -0.88
SMG1-213ENST00000567737 DEFB130BP0DP73 79 aa9.53□□□□□ -0.88
SMG1-213ENST00000567737 DEFB130AP0DP74 79 aa9.53□□□□□ -0.88
SMG1-213ENST00000567737 Q6ZRN7 208 aaPredicted RBP9.53□□□□□ -0.88
SMG1-213ENST00000567737 DEFB104AQ8WTQ1 72 aa9.53□□□□□ -0.88
SMG1-213ENST00000567737 UPK3BQ9BT76 320 aa9.53□□□□□ -0.88
SMG1-213ENST00000567737 SEPSECSQ9HD40 501 aaKnown RBP9.53□□□□□ -0.88
SMG1-213ENST00000567737 FKBP11Q9NYL4 201 aa9.53□□□□□ -0.88
SMG1-213ENST00000567737 ATP5G1P05496 136 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 GCSHP23434 173 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 ATP5G3P48201 142 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 PPP5CP53041 499 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 ARL6IP1Q15041 203 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 AADACL3Q5VUY0 350 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 ZNF555Q8NEP9 628 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 OR13F1Q8NGS4 319 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 OR51H1Q8NH63 302 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 PYDC1Q8WXC3 89 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 MAGT1Q9H0U3 335 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 PRNDQ9UKY0 176 aa9.52□□□□□ -0.89
SMG1-213ENST00000567737 LOC100996750A0A140TA64 210 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 TMEM50AO95807 157 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 NKX2-1P43699 371 aaPredicted RBP9.51□□□□□ -0.89
SMG1-213ENST00000567737 ARPC4P59998 168 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 TMEM69Q5SWH9 247 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 C1orf158Q8N1D5 194 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 ZNF709Q8N972 641 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 ZNF114Q8NC26 417 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 TMEM230Q96A57 120 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 UHRF2Q96PU4 802 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 TMEM208Q9BTX3 173 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 C9orf16Q9BUW7 83 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 KRTAP4-6Q9BYQ5 205 aa9.51□□□□□ -0.89
SMG1-213ENST00000567737 FNDC4Q9H6D8 234 aaPredicted RBP9.51□□□□□ -0.89
SMG1-213ENST00000567737 ELF5Q9UKW6 265 aaPredicted RBP9.51□□□□□ -0.89
SMG1-213ENST00000567737 METTL21EPA6NDL7 271 aa9.5□□□□□ -0.89
SMG1-213ENST00000567737 XP32Q5T750 250 aa9.5□□□□□ -0.89
SMG1-213ENST00000567737 HES5Q5TA89 166 aa9.5□□□□□ -0.89
SMG1-213ENST00000567737 GDF5OSQ5U4N7 250 aa9.5□□□□□ -0.89
SMG1-213ENST00000567737 NANOGP1Q8N7R0 232 aa9.5□□□□□ -0.89
SMG1-213ENST00000567737 OR4B1Q8NGF8 309 aa9.5□□□□□ -0.89
SMG1-213ENST00000567737 SLC5A7Q9GZV3 580 aa9.5□□□□□ -0.89
SMG1-213ENST00000567737 NRN1Q9NPD7 142 aa9.5□□□□□ -0.89
SMG1-213ENST00000567737 ANXA10Q9UJ72 324 aa9.5□□□□□ -0.89
SMG1-213ENST00000567737 V9GY05 133 aa9.5□□□□□ -0.89
SMG1-213ENST00000567737 M0QYG6 137 aa9.49□□□□□ -0.89
SMG1-213ENST00000567737 SCGB2A1O75556 95 aa9.49□□□□□ -0.89
SMG1-213ENST00000567737 KRASP01116 189 aa9.49□□□□□ -0.89
SMG1-213ENST00000567737 FCGR2CP31995 323 aa9.49□□□□□ -0.89
SMG1-213ENST00000567737 C16orf54Q6UWD8 224 aa9.49□□□□□ -0.89
SMG1-213ENST00000567737 CADM3Q8N126 398 aa9.49□□□□□ -0.89
SMG1-213ENST00000567737 OR4C16Q8NGL9 310 aa9.49□□□□□ -0.89
SMG1-213ENST00000567737 GLMPQ8WWB7 406 aa9.49□□□□□ -0.89
SMG1-213ENST00000567737 TMEM70Q9BUB7 260 aa9.49□□□□□ -0.89
SMG1-213ENST00000567737 SLC35B3Q9H1N7 401 aa9.49□□□□□ -0.89
SMG1-213ENST00000567737 NOTOA8MTQ0 251 aa9.48□□□□□ -0.89
SMG1-213ENST00000567737 ARL6IP5O75915 188 aa9.48□□□□□ -0.89
SMG1-213ENST00000567737 DNAH10OSP0CZ25 163 aa9.48□□□□□ -0.89
SMG1-213ENST00000567737 G6PCP35575 357 aa9.48□□□□□ -0.89
SMG1-213ENST00000567737 PSG9Q00887 426 aa9.48□□□□□ -0.89
SMG1-213ENST00000567737 CDNFQ49AH0 187 aa9.48□□□□□ -0.89
SMG1-213ENST00000567737 HACD4Q5VWC8 232 aa9.48□□□□□ -0.89
SMG1-213ENST00000567737 FOXI2Q6ZQN5 318 aa9.48□□□□□ -0.89
SMG1-213ENST00000567737 TSPAN14Q8NG11 270 aa9.48□□□□□ -0.89
SMG1-213ENST00000567737 TMEM203Q969S6 136 aa9.48□□□□□ -0.89
SMG1-213ENST00000567737 TSC22D3Q99576 134 aa9.48□□□□□ -0.89
SMG1-213ENST00000567737 SAV1Q9H4B6 383 aaPredicted RBP9.48□□□□□ -0.89
SMG1-213ENST00000567737 MRPS16Q9Y3D3 137 aaKnown RBP9.48□□□□□ -0.89
SMG1-213ENST00000567737 A0A087WTM6 91 aa9.47□□□□□ -0.89
SMG1-213ENST00000567737 CBY3A6NI87 242 aa9.47□□□□□ -0.89
SMG1-213ENST00000567737 DBX1A6NMT0 343 aa9.47□□□□□ -0.89
SMG1-213ENST00000567737 PPYP01298 95 aa9.47□□□□□ -0.89
SMG1-213ENST00000567737 HNRNPCP07910 306 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMG1-213ENST00000567737 DEFB1P60022 68 aa9.47□□□□□ -0.89
SMG1-213ENST00000567737 ERHP84090 104 aaKnown RBP9.47□□□□□ -0.89
SMG1-213ENST00000567737 AHSA2Q719I0 299 aa9.47□□□□□ -0.89
SMG1-213ENST00000567737 NUDCD2Q8WVJ2 157 aa9.47□□□□□ -0.89
SMG1-213ENST00000567737 GNPNAT1Q96EK6 184 aaPredicted RBP9.47□□□□□ -0.89
SMG1-213ENST00000567737 SCPEP1Q9HB40 452 aa9.47□□□□□ -0.89
SMG1-213ENST00000567737 ATP8B1O43520 1251 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms