RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 SLIRPQ9GZT3 109 aaKnown RBP1.88□□□□□ -2.11
LRRC28-218ENST00000560236 FBXL15Q9H469 300 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 GPR84Q9NQS5 396 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 SLC2A9Q9NRM0 540 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 GID8Q9NWU2 228 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 COA4Q9NYJ1 87 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 CCDC167Q9P0B6 97 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 VAPAQ9P0L0 249 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 METTL1Q9UBP6 276 aaKnown RBP1.88□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF230Q9UIE0 474 aaPredicted RBP1.88□□□□□ -2.11
LRRC28-218ENST00000560236 TBC1D24Q9ULP9 559 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 GSTK1Q9Y2Q3 226 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 AP3M1Q9Y2T2 418 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 CDH10Q9Y6N8 788 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 V9GYS6 101 aa1.88□□□□□ -2.11
LRRC28-218ENST00000560236 A0A087WTM6 91 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 TRBV9A0A0B4J1U6 114 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 TRAV3A0A0B4J244 114 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 TMEM269A0A1B0GVZ9 245 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 FAM230AA0A1W2PPH8 454 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 CCDC160A6NGH7 325 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 METTL15A6NJ78 407 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 ANGPT2O15123 496 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF254O75437 659 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 WBP4O75554 376 aaKnown RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 UPK1BO75841 260 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 FADS2O95864 444 aaKnown RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 PTTG1O95997 202 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 TRAPPC2P0DI81 140 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 TRAPPC2BP0DI82 140 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 MT1HL1P0DM35 61 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 S100A1P23297 94 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 SSTR5P35346 364 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 OMPP47874 163 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 CRISP1P54107 249 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 FXYD6P3P58550 94 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 PAFAH1B2P68402 229 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 ATXN7L3Q14CW9 347 aaPredicted RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 NDUFA5Q16718 116 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 CT45A1Q5HYN5 189 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 LY6G6FQ5SQ64 297 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 Q6ZRN7 208 aaPredicted RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 Q6ZRU5 148 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF833PQ6ZTB9 187 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 TMEM179BQ7Z7N9 219 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 APRG1Q8IVJ8 170 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 SAXO1Q8IYX7 474 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 C8orf59Q8N0T1 100 aaPredicted RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 BPIFB6Q8NFQ5 453 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 OR6N2Q8NGY6 317 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 CT45A3Q8NHU0 189 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 OTOSQ8NHW6 89 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 APH1BQ8WW43 257 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 CYGBQ8WWM9 190 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 GIMAP1Q8WWP7 306 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 CACNG8Q8WXS5 425 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 ARL11Q969Q4 196 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 C10orf35Q96D05 121 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 MRPS24Q96EL2 167 aaKnown RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 NRBF2Q96F24 287 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 NSMCE2Q96MF7 247 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 AMELYQ99218 206 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 TSNAXQ99598 290 aaKnown RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 SH3GL1Q99961 368 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 KCTD14Q9BQ13 255 aaPredicted RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 DCUN1D5Q9BTE7 237 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 OR52D1Q9H346 318 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 KAT8Q9H7Z6 458 aaKnown RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 RBFOX1Q9NWB1 397 aaKnown RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 CCDC59Q9P031 241 aaKnown RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 PIPOXQ9P0Z9 390 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 NUFIP1Q9UHK0 495 aaKnown RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 KIF25Q9UIL4 384 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 SAMD4AQ9UPU9 718 aaKnown RBP1.87□□□□□ -2.11
LRRC28-218ENST00000560236 LINC00588Q9Y4M8 146 aa1.87□□□□□ -2.11
LRRC28-218ENST00000560236 FSIP2Q5CZC0 6907 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 A0A075B6Q4 140 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 IGKV1-27A0A075B6S5 117 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 TRBV7-1A0A0A6YYK4 115 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 TRAV2A0A0B4J234 112 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 LOC100130705A0A1B0GUX0 176 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 FBLL1A6NHQ2 334 aaKnown RBP1.86□□□□□ -2.11
LRRC28-218ENST00000560236 PPP5D1E7EU14 171 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 G3V2T6 193 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 C15orf65H3BRN8 121 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 K7EMT4 169 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 K7EP13 123 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 SLC31A2O15432 143 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 NOL3O60936 208 aaKnown RBP1.86□□□□□ -2.11
LRRC28-218ENST00000560236 S1PR2O95136 353 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 SOX14O95416 240 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 DBTP11182 482 aaKnown RBP1.86□□□□□ -2.11
LRRC28-218ENST00000560236 PSKH1P11801 424 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 SPI1P17947 270 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 PRKACBP22694 351 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 YAP1P46937 504 aaKnown RBP1.86□□□□□ -2.11
LRRC28-218ENST00000560236 GSSP48637 474 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 EIF2B2P49770 351 aaKnown RBP1.86□□□□□ -2.11
LRRC28-218ENST00000560236 DAPP51397 102 aa1.86□□□□□ -2.11
LRRC28-218ENST00000560236 KRTAP10-4P60372 401 aaPredicted RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms