RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 CGB7P0DN87 165 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 CTRB1P17538 263 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 PRKACBP22694 351 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 ERP29P30040 261 aaKnown RBP1.67□□□□□ -2.14
SCFD1-219ENST00000556413 CEACAM3P40198 252 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 CAMLGP49069 296 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 RAB7AP51149 207 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 MNAT1P51948 309 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 BLVRAP53004 296 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 RBM11P57052 281 aaKnown RBP1.67□□□□□ -2.14
SCFD1-219ENST00000556413 TAS2R19P59542 299 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF816Q0VGE8 651 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-219ENST00000556413 FLOT2Q14254 428 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 ARL6IP1Q15041 203 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 RSU1Q15404 277 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 KISS1Q15726 138 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 C5orf64Q2M2E5 130 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 TRIM16LQ309B1 348 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 DEFB135Q30KP9 77 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 HSP90B2PQ58FF3 399 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 SPIN3Q5JUX0 258 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 SYT6Q5T7P8 510 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-219ENST00000556413 OR2G6Q5TZ20 316 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 C12orf73Q69YU5 71 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 IDO2Q6ZQW0 420 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF767PQ75MW2 155 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 TPRA1Q86W33 373 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 JAGN1Q8N5M9 183 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF439Q8NDP4 499 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 NPBQ8NG41 125 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 OR51T1Q8NGJ9 327 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 OR6Q1Q8NGQ2 317 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 MYOZ3Q8TDC0 251 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 HAVCR2Q8TDQ0 301 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 DYNLRB2Q8TF09 96 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 GIMAP1Q8WWP7 306 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 MRPS24Q96EL2 167 aaKnown RBP1.67□□□□□ -2.14
SCFD1-219ENST00000556413 PELI1Q96FA3 418 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 OR4C12Q96R67 309 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 CIB1Q99828 191 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF251Q9BRH9 671 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 C20orf85Q9H1P6 137 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 IFI27L2Q9H2X8 130 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 COA4Q9NYJ1 87 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 TAS2R3Q9NYW6 316 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 METTL1Q9UBP6 276 aaKnown RBP1.67□□□□□ -2.14
SCFD1-219ENST00000556413 GLS2Q9UI32 602 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 TRAPPC2LQ9UL33 140 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 ST3GAL6Q9Y274 331 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 AP3M1Q9Y2T2 418 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 V9GY05 133 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 IGKV3-7A0A075B6H7 116 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 IGHV3-49A0A0A0MS15 119 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 IGHV3-74A0A0B4J1X5 117 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 DAPL1A0PJW8 107 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 FUOMA2VDF0 154 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 OOSP1A8MZH6 123 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 F8WDY8 70 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 H0YJW9 148 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 H7C2Y5 167 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 NDUFAB1O14561 156 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 SULT1B1O43704 296 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 CRTAPO75718 401 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-219ENST00000556413 OR2J3O76001 311 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 SERPINA3P01011 423 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 IGLV1-51P01701 117 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 HLA-DRB1P01911 266 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 MT-ND4P03905 459 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 MAS1P04201 325 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 IGKV1-16P04430 117 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 IFNA6P05013 189 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 REG1AP05451 166 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 CT45A6P0DMU7 189 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 CT45A5P0DMU8 189 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 CT45A7P0DMV0 189 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 RPA2P15927 270 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 IGFBP3P17936 291 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-219ENST00000556413 RAB3AP20336 220 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 IL3RAP26951 378 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 BTCP35070 178 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 FUSP35637 526 aaKnown RBP eCLIP1.66□□□□□ -2.14
SCFD1-219ENST00000556413 TFPI2P48307 235 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 CDC42P60953 191 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 GK3PQ14409 553 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 FXYD3Q14802 87 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 Q3ZCU0 254 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 LINC00483Q53H64 154 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 ACTBL2Q562R1 376 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 NXNL2Q5VZ03 156 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 FAHD1Q6P587 224 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 GLIPR1L1Q6UWM5 242 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 SLC25A48Q6ZT89 311 aaKnown RBP1.66□□□□□ -2.14
SCFD1-219ENST00000556413 UTS2BQ765I0 119 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 LYG2Q86SG7 212 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 Q8IYB0 196 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 VKORC1L1Q8N0U8 176 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 COMMD1Q8N668 190 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 OR9G4Q8NGQ1 327 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 OR5B3Q8NH48 314 aa1.66□□□□□ -2.14
SCFD1-219ENST00000556413 OR52N1Q8NH53 320 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms