RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 C21orf62Q9NYP8 219 aa9.67□□□□□ -0.86
SHMT2-221ENST00000555773 IGSF23A1L1A6 192 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 PRSS46E5RG02 174 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 FNDC10F2Z333 226 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 G3V3Q6 166 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 CST7O76096 145 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 RPL12P30050 165 aaKnown RBP9.66□□□□□ -0.86
SHMT2-221ENST00000555773 DLK1P80370 383 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 MLANAQ16655 118 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 ATP6V1FQ16864 119 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 KHDC1LQ5JSQ8 128 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 OR8G2PQ6IF36 304 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 SHISA2Q6UWI4 295 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 INO80EQ8NBZ0 244 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-221ENST00000555773 TMEM116Q8NCL8 245 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 OR4X1Q8NH49 305 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 C4orf3Q8WVX3 66 aa9.66□□□□□ -0.86
SHMT2-221ENST00000555773 FXYD6-FXYD2A0A087WZ82 144 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.65□□□□□ -0.86
SHMT2-221ENST00000555773 MFSD2BA6NFX1 497 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 HMSDA8MTL9 139 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 I3L521 148 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 IGHV3-11P01762 117 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 CLEC3BP05452 202 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 LGALS1P09382 135 aaKnown RBP9.65□□□□□ -0.86
SHMT2-221ENST00000555773 EWSR1Q01844 656 aaKnown RBP eCLIP9.65□□□□□ -0.86
SHMT2-221ENST00000555773 ACSM6Q6P461 480 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 SLC16A13Q7RTY0 426 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 SLC35E1Q96K37 410 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 AQP10Q96PS8 301 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 NEURL2Q9BR09 285 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 GNB4Q9HAV0 340 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 ZC4H2Q9NQZ6 224 aa9.65□□□□□ -0.86
SHMT2-221ENST00000555773 PEF1Q9UBV8 284 aaKnown RBP9.65□□□□□ -0.86
SHMT2-221ENST00000555773 TRAV30A0A087WSZ9 112 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 IGHV3-21A0A0B4J1V1 117 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 NUDT19A8MXV4 375 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 SMLR1H3BR10 107 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 CLN5O75503 358 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 SCGB2A1O75556 95 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 HSPB1P04792 205 aaKnown RBP9.64□□□□□ -0.87
SHMT2-221ENST00000555773 DEFA5Q01523 94 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 NHLH2Q02577 135 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 SLC38A11Q08AI6 406 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 ARL16Q0P5N6 197 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 GAMTQ14353 236 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 Q56UQ5 140 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 SPSB3Q6PJ21 355 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 ACOT7LQ6ZUV0 252 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 HAPLN4Q86UW8 402 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 TMEM217Q8N7C4 229 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 KLHL30-AS1Q8NEE0 82 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 BSCL2Q96G97 398 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-221ENST00000555773 MDFIQ99750 246 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 NPVFQ9HCQ7 196 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 TNFSF18Q9UNG2 199 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 HSPB11Q9Y547 144 aa9.64□□□□□ -0.87
SHMT2-221ENST00000555773 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
SHMT2-221ENST00000555773 GNG7O60262 68 aa9.63□□□□□ -0.87
SHMT2-221ENST00000555773 PFDN1O60925 122 aa9.63□□□□□ -0.87
SHMT2-221ENST00000555773 IGHV3-48P01763 117 aa9.63□□□□□ -0.87
SHMT2-221ENST00000555773 C1QBP02746 253 aa9.63□□□□□ -0.87
SHMT2-221ENST00000555773 CLEC19AQ6UXS0 136 aa9.63□□□□□ -0.87
SHMT2-221ENST00000555773 TMEM144Q7Z5S9 345 aa9.63□□□□□ -0.87
SHMT2-221ENST00000555773 NPIPB3Q92617 1050 aa9.63□□□□□ -0.87
SHMT2-221ENST00000555773 HYLS1Q96M11 299 aa9.63□□□□□ -0.87
SHMT2-221ENST00000555773 CCDC140Q96MF4 163 aa9.63□□□□□ -0.87
SHMT2-221ENST00000555773 OR5B12Q96R08 314 aa9.63□□□□□ -0.87
SHMT2-221ENST00000555773 A0A1W2PRX2 142 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 ANKRD34BA5PLL1 514 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 OR2T8A6NH00 312 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 F8W735 103 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-221ENST00000555773 NUPL2O15504 423 aaKnown RBP9.62□□□□□ -0.87
SHMT2-221ENST00000555773 GGCTO75223 188 aaKnown RBP9.62□□□□□ -0.87
SHMT2-221ENST00000555773 DFFBO76075 338 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 IGHV3-23P01764 117 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 CTSGP08311 255 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 RND2P52198 227 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 OR2F1Q13607 317 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 VWC2Q2TAL6 325 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 C18orf65Q6ZTR6 163 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 LILRB2Q8N423 598 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 UBAC2Q8NBM4 344 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 OR11H4Q8NGC9 324 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 OR5C1Q8NGR4 320 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 OR1N2Q8NGR9 330 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 DPF1Q92782 380 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 ACY3Q96HD9 319 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 TMEM147Q9BVK8 224 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 MFFQ9GZY8 342 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 UQCC1Q9NVA1 299 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 MRPL36Q9P0J6 103 aaKnown RBP9.62□□□□□ -0.87
SHMT2-221ENST00000555773 S4R3C0 116 aa9.62□□□□□ -0.87
SHMT2-221ENST00000555773 SMCO3A2RU48 225 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 LINC01619G3V211 115 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 CCL24O00175 119 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 ARPC5O15511 151 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 TGOLN2O43493 480 aa9.61□□□□□ -0.87
SHMT2-221ENST00000555773 FABP1P07148 127 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms