RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 IGLL1P15814 213 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 KLF3P57682 345 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-228ENST00000548938 UBE2V1Q13404 147 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 VWA1Q6PCB0 445 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 NUP35Q8NFH5 326 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 PPP1R35Q8TAP8 253 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 WIPF2Q8TF74 440 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-228ENST00000548938 FAM167A-AS1Q96KT0 104 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 SLC25A2Q9BXI2 301 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 TNFRSF19Q9NS68 423 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 CLCF1Q9UBD9 225 aa11.18□□□□□ -0.62
HDAC7-228ENST00000548938 TBR1Q16650 682 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 OR4F17Q8NGA8 305 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 OR8B3Q8NGG8 313 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 SNRNP40Q96DI7 357 aaKnown RBP11.17□□□□□ -0.62
HDAC7-228ENST00000548938 OR8B2Q96RD0 313 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 PRNDQ9UKY0 176 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 A0A1W2PN81 502 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 NKX2-8O15522 239 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 IGKV1-16P04430 117 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 PYYP10082 97 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 UBE2G1P62253 170 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 MSMPQ1L6U9 139 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 FAM201AQ5SY85 155 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 PRR27Q6MZM9 219 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 DUX4L9Q6RFH8 374 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-228ENST00000548938 PNKDQ8N490 385 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
HDAC7-228ENST00000548938 CHTOPQ9Y3Y2 248 aaKnown RBP11.17□□□□□ -0.62
HDAC7-228ENST00000548938 BOD1L1Q8NFC6 3051 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 PTPRZ1P23471 2315 aaPredicted RBP11.16□□□□□ -0.62
HDAC7-228ENST00000548938 LOC105371242A0A075B767 164 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 IGHV2OR16-5A0A0B4J2B6 119 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 C2orf70A6NJV1 201 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 SRRM4A7MD48 611 aaKnown RBP11.16□□□□□ -0.62
HDAC7-228ENST00000548938 CGB3P0DN86 165 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 CGB7P0DN87 165 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 RTL8BQ17RB0 113 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 OR10W1Q8NGF6 305 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 OR5B3Q8NH48 314 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 ALKBH7Q9BT30 221 aaPredicted RBP11.16□□□□□ -0.62
HDAC7-228ENST00000548938 SAP30LQ9HAJ7 183 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 CLEC5AQ9NY25 188 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 ZNRD1Q9P1U0 126 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 H0YJW9 148 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 CAMPP49913 170 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 POU2AF1Q16633 256 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 MOGAT3Q86VF5 341 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 NUDT10Q8NFP7 164 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 ST6GALNAC6Q969X2 333 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 NUDT11Q96G61 164 aa11.16□□□□□ -0.62
HDAC7-228ENST00000548938 AMMECR1Q9Y4X0 333 aaPredicted RBP11.16□□□□□ -0.62
HDAC7-228ENST00000548938 IGHV1-18A0A0C4DH31 117 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 IGHV1-69-2A0A0G2JMI3 117 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 IGLC7A0M8Q6 106 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 UPK2O00526 184 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 RNASE2P10153 161 aaKnown RBP11.15□□□□□ -0.62
HDAC7-228ENST00000548938 WT1P19544 449 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-228ENST00000548938 KLF5Q13887 457 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-228ENST00000548938 MBNL2Q5VZF2 373 aaKnown RBP11.15□□□□□ -0.62
HDAC7-228ENST00000548938 RASL11AQ6T310 242 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 C22orf15Q8WYQ4 148 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 C19orf24Q9BVV8 132 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 CUL9Q8IWT3 2517 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 HEATR1Q9H583 2144 aaKnown RBP11.15□□□□□ -0.62
HDAC7-228ENST00000548938 TEX50A0A1B0GTY4 177 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 PSMB11A5LHX3 300 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 SH2D7A6NKC9 451 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-228ENST00000548938 CORTO00230 105 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 NBL1P41271 181 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 SSBP2P81877 361 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-228ENST00000548938 C2orf83Q53S99 150 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-228ENST00000548938 OR2T6Q8NHC8 308 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 OR2V2Q96R30 315 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 ZNF257Q9Y2Q1 563 aa11.15□□□□□ -0.62
HDAC7-228ENST00000548938 KBTBD11-OT1A0A1B0GTJ5 212 aa11.15□□□□□ -0.63
HDAC7-228ENST00000548938 HIGD1CA8MV81 97 aa11.15□□□□□ -0.63
HDAC7-228ENST00000548938 VWC2LB2RUY7 222 aa11.15□□□□□ -0.63
HDAC7-228ENST00000548938 ITGB1BP1O14713 200 aa11.15□□□□□ -0.63
HDAC7-228ENST00000548938 KIR2DL2P43627 348 aaPredicted RBP11.15□□□□□ -0.63
HDAC7-228ENST00000548938 CD69Q07108 199 aa11.15□□□□□ -0.63
HDAC7-228ENST00000548938 GUSBP1Q15486 140 aa11.15□□□□□ -0.63
HDAC7-228ENST00000548938 FAM231DQ6ZW35 169 aa11.15□□□□□ -0.63
HDAC7-228ENST00000548938 MUC15Q8N387 334 aa11.15□□□□□ -0.63
HDAC7-228ENST00000548938 GRAMD2BQ96HH9 432 aa11.15□□□□□ -0.63
HDAC7-228ENST00000548938 GAL3ST2Q9H3Q3 398 aa11.15□□□□□ -0.63
HDAC7-228ENST00000548938 PEX7O00628 323 aa11.14□□□□□ -0.63
HDAC7-228ENST00000548938 CEACAM8P31997 349 aaPredicted RBP11.14□□□□□ -0.63
HDAC7-228ENST00000548938 ERASQ7Z444 233 aa11.14□□□□□ -0.63
HDAC7-228ENST00000548938 ZNF329Q86UD4 541 aa11.14□□□□□ -0.63
HDAC7-228ENST00000548938 URB1-AS1Q96HZ7 61 aa11.14□□□□□ -0.63
HDAC7-228ENST00000548938 ADTRPQ96IZ2 230 aa11.14□□□□□ -0.63
HDAC7-228ENST00000548938 MRPL32Q9BYC8 188 aaKnown RBP11.14□□□□□ -0.63
HDAC7-228ENST00000548938 CADP27708 2225 aa11.14□□□□□ -0.63
HDAC7-228ENST00000548938 M0QZ24 198 aa11.14□□□□□ -0.63
HDAC7-228ENST00000548938 TM4SF5O14894 197 aa11.14□□□□□ -0.63
HDAC7-228ENST00000548938 OR2J3O76001 311 aa11.14□□□□□ -0.63
HDAC7-228ENST00000548938 FBLN7Q53RD9 439 aa11.14□□□□□ -0.63
HDAC7-228ENST00000548938 C9orf106Q8NAJ2 232 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms