RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 NKX6-2Q9C056 277 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-217ENST00000541578 FBXO5Q9UKT4 447 aa2.7□□□□□ -1.98
SNHG1-217ENST00000541578 NSD1Q96L73 2696 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-217ENST00000541578 ARID1AO14497 2285 aa2.7□□□□□ -1.98
SNHG1-217ENST00000541578 VPS13CQ709C8 3753 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 IGHV1-3A0A0C4DH29 117 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 DAPL1A0PJW8 107 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 C20orf202A1L168 122 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 C7orf66A4D0T2 115 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 PGPA6NDG6 321 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 A8MWP6 167 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 K7ERU9 68 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 AIPO00170 330 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 CXCR6O00574 342 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 RTL8CO15255 209 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 TGOLN2O43493 480 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 MRPS14O60783 128 aaKnown RBP2.69□□□□□ -1.98
SNHG1-217ENST00000541578 ADAP1O75689 374 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 PDYNP01213 254 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 CD5P06127 495 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 CECR9P0C854 216 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 S100A2P29034 98 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 AKR1C3P42330 323 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 CRYBA4P53673 196 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 OR4D2P58180 307 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 OR10A3P58181 314 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 KRTAP10-8P60410 259 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 FAM3AP98173 230 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 EMX1Q04741 257 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-217ENST00000541578 AESQ08117 197 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 ZNF616Q08AN1 781 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 ZNF404Q494X3 552 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 SLC36A2Q495M3 483 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 FAM45BPQ6NSW5 357 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 HAGHLQ6PII5 290 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-217ENST00000541578 RASSF6Q6ZTQ3 369 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 FAM183BPQ6ZVS7 135 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 UMODL1-AS1Q8N2C9 162 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 ZDHHC22Q8N966 263 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 OR5K1Q8NHB7 308 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 UBALD1Q8TB05 177 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 SRSF12Q8WXF0 261 aaKnown RBP2.69□□□□□ -1.98
SNHG1-217ENST00000541578 ACOT12Q8WYK0 555 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 STARD4Q96DR4 205 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 DCUN1D1Q96GG9 259 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 COX14Q96I36 57 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 SPACA5Q96QH8 159 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 RBP7Q96R05 134 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 OR52B2Q96RD2 323 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 REG4Q9BYZ8 158 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 ZNF436Q9C0F3 470 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-217ENST00000541578 DHX35Q9H5Z1 703 aaKnown RBP2.69□□□□□ -1.98
SNHG1-217ENST00000541578 SLC2A9Q9NRM0 540 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 SPANXA1Q9NS26 97 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 TAC3Q9UHF0 121 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 KLK12Q9UKR0 248 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 C14orf166Q9Y224 244 aaKnown RBP2.69□□□□□ -1.98
SNHG1-217ENST00000541578 BTRCQ9Y297 605 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 ZFP30Q9Y2G7 519 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 ZNF835Q9Y2P0 537 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 HSPB11Q9Y547 144 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 ZNF469Q96JG9 3925 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-217ENST00000541578 HEATR5AQ86XA9 2040 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 DNAJC13O75165 2243 aa2.69□□□□□ -1.98
SNHG1-217ENST00000541578 FBN1P35555 2871 aaKnown RBP2.69□□□□□ -1.98
SNHG1-217ENST00000541578 DSCAMO60469 2012 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 AKAP6Q13023 2319 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 PNMA8CA0A1B0GUJ8 204 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 FTCDNL1E5RQL4 147 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 F5H5K5 113 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 TCF21O43680 179 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 KLF7O75840 302 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-217ENST00000541578 ATG12O94817 140 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 IGLV2-8P01709 118 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 BPGMP07738 259 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 TSPOP30536 169 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 MEF2CQ06413 473 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-217ENST00000541578 TAF9Q16594 264 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 CLEC12BQ2HXU8 276 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 DEFB113Q30KQ7 82 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 Q499Y3 187 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 SAMD13Q5VXD3 122 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 DNM1P34Q6PK57 102 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 C16orf47Q6ZP98 133 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-217ENST00000541578 OLIG3Q7RTU3 272 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 TRAPPC5Q8IUR0 188 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 BAP18Q8IXM2 172 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 SVBPQ8N300 66 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 GATD1Q8NB37 220 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 OR10K1Q8NGX5 313 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 CYGBQ8WWM9 190 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 LCN9Q8WX39 176 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 ASB17Q8WXJ9 295 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 ASB13Q8WXK3 278 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 FRZBQ92765 325 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 CPNE2Q96FN4 548 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-217ENST00000541578 C18orf15Q96N68 181 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 DERL3Q96Q80 235 aa2.68□□□□□ -1.98
SNHG1-217ENST00000541578 CMSS1Q9BQ75 279 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms