RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 CRYBB3P26998 211 aa14.36□□□□□ -0.11
LPCAT3-210ENST00000540090 S100GP29377 79 aa14.36□□□□□ -0.11
LPCAT3-210ENST00000540090 LGALS9BQ3B8N2 356 aa14.36□□□□□ -0.11
LPCAT3-210ENST00000540090 ACTL10Q5JWF8 245 aa14.36□□□□□ -0.11
LPCAT3-210ENST00000540090 LPCAT3Q6P1A2 487 aa14.36□□□□□ -0.11
LPCAT3-210ENST00000540090 TBC1D26Q86UD7 250 aa14.36□□□□□ -0.11
LPCAT3-210ENST00000540090 METTL26Q96S19 204 aa14.36□□□□□ -0.11
LPCAT3-210ENST00000540090 RAB26Q9ULW5 256 aa14.36□□□□□ -0.11
LPCAT3-210ENST00000540090 LOC100506127A0A0U1RQW1 187 aa14.35□□□□□ -0.11
LPCAT3-210ENST00000540090 INS-IGF2F8WCM5 200 aa14.35□□□□□ -0.11
LPCAT3-210ENST00000540090 ZNF767PQ75MW2 155 aa14.35□□□□□ -0.11
LPCAT3-210ENST00000540090 MRGPRFQ96AM1 343 aa14.35□□□□□ -0.11
LPCAT3-210ENST00000540090 NDUFAF3Q9BU61 184 aa14.35□□□□□ -0.11
LPCAT3-210ENST00000540090 HSPG2P98160 4391 aa14.34□□□□□ -0.11
LPCAT3-210ENST00000540090 HRH1P35367 487 aa14.34□□□□□ -0.11
LPCAT3-210ENST00000540090 SNCAP37840 140 aa14.34□□□□□ -0.11
LPCAT3-210ENST00000540090 P2RY1P47900 373 aa14.34□□□□□ -0.11
LPCAT3-210ENST00000540090 SPINK9Q5DT21 86 aa14.34□□□□□ -0.11
LPCAT3-210ENST00000540090 SCRT1Q9BWW7 348 aa14.34□□□□□ -0.11
LPCAT3-210ENST00000540090 PPP5CP53041 499 aa14.33□□□□□ -0.12
LPCAT3-210ENST00000540090 TAS2R20P59543 309 aa14.33□□□□□ -0.12
LPCAT3-210ENST00000540090 RAB40CQ96S21 281 aa14.33□□□□□ -0.12
LPCAT3-210ENST00000540090 MRPL36Q9P0J6 103 aaKnown RBP14.33□□□□□ -0.12
LPCAT3-210ENST00000540090 CORTO00230 105 aa14.32□□□□□ -0.12
LPCAT3-210ENST00000540090 CLN5O75503 358 aa14.32□□□□□ -0.12
LPCAT3-210ENST00000540090 NPY1RP25929 384 aa14.32□□□□□ -0.12
LPCAT3-210ENST00000540090 HLA-DMAP28067 261 aa14.32□□□□□ -0.12
LPCAT3-210ENST00000540090 PRSS3P35030 304 aa14.32□□□□□ -0.12
LPCAT3-210ENST00000540090 IZUMO4Q1ZYL8 232 aa14.32□□□□□ -0.12
LPCAT3-210ENST00000540090 KCTD21Q4G0X4 260 aa14.32□□□□□ -0.12
LPCAT3-210ENST00000540090 UBE2NLQ5JXB2 153 aa14.32□□□□□ -0.12
LPCAT3-210ENST00000540090 TMEM69Q5SWH9 247 aa14.32□□□□□ -0.12
LPCAT3-210ENST00000540090 OR4X1Q8NH49 305 aa14.32□□□□□ -0.12
LPCAT3-210ENST00000540090 KRTAP4-5Q9BYR2 181 aa14.32□□□□□ -0.12
LPCAT3-210ENST00000540090 A0A0B4J293 547 aa14.31□□□□□ -0.12
LPCAT3-210ENST00000540090 RNASE2P10153 161 aaKnown RBP14.31□□□□□ -0.12
LPCAT3-210ENST00000540090 SUB1P53999 127 aaKnown RBP eCLIP14.31□□□□□ -0.12
LPCAT3-210ENST00000540090 UCP3P55916 312 aa14.31□□□□□ -0.12
LPCAT3-210ENST00000540090 TSPAN5P62079 268 aa14.31□□□□□ -0.12
LPCAT3-210ENST00000540090 MLANAQ16655 118 aa14.31□□□□□ -0.12
LPCAT3-210ENST00000540090 TMEM230Q96A57 120 aa14.31□□□□□ -0.12
LPCAT3-210ENST00000540090 FNDC4Q9H6D8 234 aaPredicted RBP14.31□□□□□ -0.12
LPCAT3-210ENST00000540090 U3KQE9 123 aa14.31□□□□□ -0.12
LPCAT3-210ENST00000540090 RPL5P46777 297 aaKnown RBP14.3□□□□□ -0.12
LPCAT3-210ENST00000540090 CROCCP3Q8IVE0 287 aa14.3□□□□□ -0.12
LPCAT3-210ENST00000540090 NARS2Q96I59 477 aaKnown RBP14.3□□□□□ -0.12
LPCAT3-210ENST00000540090 C1QTNF4Q9BXJ3 329 aa14.3□□□□□ -0.12
LPCAT3-210ENST00000540090 YTHDF1Q9BYJ9 559 aaKnown RBP14.3□□□□□ -0.12
LPCAT3-210ENST00000540090 IFNA10P01566 189 aa14.29□□□□□ -0.12
LPCAT3-210ENST00000540090 IGKV1-17P01599 117 aa14.29□□□□□ -0.12
LPCAT3-210ENST00000540090 P0C879 139 aa14.29□□□□□ -0.12
LPCAT3-210ENST00000540090 EIF2B2P49770 351 aaKnown RBP14.29□□□□□ -0.12
LPCAT3-210ENST00000540090 NUTF2P61970 127 aaKnown RBP14.29□□□□□ -0.12
LPCAT3-210ENST00000540090 DHRS2Q13268 280 aa14.29□□□□□ -0.12
LPCAT3-210ENST00000540090 PSMG4Q5JS54 123 aa14.29□□□□□ -0.12
LPCAT3-210ENST00000540090 Q6ZR54 194 aa14.29□□□□□ -0.12
LPCAT3-210ENST00000540090 SLC35G3Q8N808 338 aa14.29□□□□□ -0.12
LPCAT3-210ENST00000540090 GPX8Q8TED1 209 aa14.29□□□□□ -0.12
LPCAT3-210ENST00000540090 HELTA6NFD8 242 aa14.28□□□□□ -0.12
LPCAT3-210ENST00000540090 IFNA17P01571 189 aa14.28□□□□□ -0.12
LPCAT3-210ENST00000540090 IGKV1-5P01602 117 aa14.28□□□□□ -0.12
LPCAT3-210ENST00000540090 CD74P04233 296 aa14.28□□□□□ -0.12
LPCAT3-210ENST00000540090 ETV6P41212 452 aa14.28□□□□□ -0.12
LPCAT3-210ENST00000540090 AP2S1P53680 142 aaPredicted RBP14.28□□□□□ -0.12
LPCAT3-210ENST00000540090 SAMD12Q8N8I0 201 aa14.28□□□□□ -0.12
LPCAT3-210ENST00000540090 TRAV30A0A087WSZ9 112 aa14.27□□□□□ -0.13
LPCAT3-210ENST00000540090 SCGB2A1O75556 95 aa14.27□□□□□ -0.13
LPCAT3-210ENST00000540090 OPRK1P41145 380 aa14.27□□□□□ -0.13
LPCAT3-210ENST00000540090 TIGITQ495A1 244 aa14.27□□□□□ -0.13
LPCAT3-210ENST00000540090 C16orf54Q6UWD8 224 aa14.27□□□□□ -0.13
LPCAT3-210ENST00000540090 GLMPQ8WWB7 406 aa14.27□□□□□ -0.13
LPCAT3-210ENST00000540090 SEPSECSQ9HD40 501 aaKnown RBP14.27□□□□□ -0.13
LPCAT3-210ENST00000540090 XCL2Q9UBD3 114 aa14.27□□□□□ -0.13
LPCAT3-210ENST00000540090 LRP1BQ9NZR2 4599 aa14.26□□□□□ -0.13
LPCAT3-210ENST00000540090 H3BMM0 161 aa14.26□□□□□ -0.13
LPCAT3-210ENST00000540090 IFNA21P01568 189 aa14.26□□□□□ -0.13
LPCAT3-210ENST00000540090 ZNF575Q86XF7 245 aa14.26□□□□□ -0.13
LPCAT3-210ENST00000540090 FAM210BQ96KR6 192 aa14.26□□□□□ -0.13
LPCAT3-210ENST00000540090 NEU1Q99519 415 aa14.26□□□□□ -0.13
LPCAT3-210ENST00000540090 IGLV2-18A0A075B6J9 118 aa14.25□□□□□ -0.13
LPCAT3-210ENST00000540090 SPART-AS1P0CW21 52 aa14.25□□□□□ -0.13
LPCAT3-210ENST00000540090 RPS19P39019 145 aaKnown RBP14.25□□□□□ -0.13
LPCAT3-210ENST00000540090 RND3P61587 244 aa14.25□□□□□ -0.13
LPCAT3-210ENST00000540090 BSXQ3C1V8 233 aa14.25□□□□□ -0.13
LPCAT3-210ENST00000540090 ZNF705AQ6ZN79 300 aaPredicted RBP14.25□□□□□ -0.13
LPCAT3-210ENST00000540090 Q6ZRM9 215 aa14.25□□□□□ -0.13
LPCAT3-210ENST00000540090 PDCD10Q9BUL8 212 aa14.25□□□□□ -0.13
LPCAT3-210ENST00000540090 FAM90A26D6RGX4 464 aa14.24□□□□□ -0.13
LPCAT3-210ENST00000540090 HNRNPCP07910 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
LPCAT3-210ENST00000540090 TGFBR1P36897 503 aa14.24□□□□□ -0.13
LPCAT3-210ENST00000540090 HOXA1P49639 335 aaPredicted RBP14.24□□□□□ -0.13
LPCAT3-210ENST00000540090 AKR1C2P52895 323 aa14.24□□□□□ -0.13
LPCAT3-210ENST00000540090 SNRPD3P62318 126 aaKnown RBP14.24□□□□□ -0.13
LPCAT3-210ENST00000540090 Q8WTZ3 238 aa14.24□□□□□ -0.13
LPCAT3-210ENST00000540090 SCPEP1Q9HB40 452 aa14.24□□□□□ -0.13
LPCAT3-210ENST00000540090 ENY2Q9NPA8 101 aa14.24□□□□□ -0.13
LPCAT3-210ENST00000540090 TMEM189A5PLL7 270 aa14.23□□□□□ -0.13
LPCAT3-210ENST00000540090 ZNF705FA8MVS1 300 aaPredicted RBP14.23□□□□□ -0.13
LPCAT3-210ENST00000540090 ATG12O94817 140 aa14.23□□□□□ -0.13
LPCAT3-210ENST00000540090 IGLC1P0CG04 106 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms