RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 OR10C1Q96KK4 312 aa11.14□□□□□ -0.63
RAB40B-202ENST00000538809 IGHV3OR16-13A0A075B7E8 117 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 IGHV3-74A0A0B4J1X5 117 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 IGHV7-4-1A0A0J9YVY3 117 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 SPCS3P61009 180 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 PYDC2Q56P42 97 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 TMEM268Q5VZI3 342 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 TMEM116Q8NCL8 245 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 SCGB3A2Q96PL1 93 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 RNF2Q99496 336 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 FNDC4Q9H6D8 234 aaPredicted RBP11.13□□□□□ -0.63
RAB40B-202ENST00000538809 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.13□□□□□ -0.63
RAB40B-202ENST00000538809 MCUBQ9NWR8 336 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 PRR13Q9NZ81 148 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 CACNG5Q9UF02 275 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 SMPXQ9UHP9 88 aa11.13□□□□□ -0.63
RAB40B-202ENST00000538809 IGKV3-7A0A075B6H7 116 aa11.12□□□□□ -0.63
RAB40B-202ENST00000538809 OR4C46A6NHA9 309 aa11.12□□□□□ -0.63
RAB40B-202ENST00000538809 CHEK1O14757 476 aa11.12□□□□□ -0.63
RAB40B-202ENST00000538809 TFPI2P48307 235 aa11.12□□□□□ -0.63
RAB40B-202ENST00000538809 DEDD2Q8WXF8 326 aa11.12□□□□□ -0.63
RAB40B-202ENST00000538809 RHPN1-AS1Q9BWJ2 59 aa11.12□□□□□ -0.63
RAB40B-202ENST00000538809 ENY2Q9NPA8 101 aa11.12□□□□□ -0.63
RAB40B-202ENST00000538809 MRPL36Q9P0J6 103 aaKnown RBP11.12□□□□□ -0.63
RAB40B-202ENST00000538809 LCE6AA0A183 80 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 CORTO00230 105 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 S100A5P33763 92 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 FAUP35544 74 aaKnown RBP11.11□□□□□ -0.63
RAB40B-202ENST00000538809 SUB1P53999 127 aaKnown RBP eCLIP11.11□□□□□ -0.63
RAB40B-202ENST00000538809 AP3S2P59780 193 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 NMSQ5H8A3 153 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 TOMM5Q8N4H5 51 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 DUSP18Q8NEJ0 188 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 TMEM170AQ8WVE7 144 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 OVOL2Q9BRP0 275 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 SRRQ9GZT4 340 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 ZFAND3Q9H8U3 227 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 KCNIP3Q9Y2W7 256 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 AGRNO00468 2067 aa11.11□□□□□ -0.63
RAB40B-202ENST00000538809 TRAV14DV4A0A0A6YYC5 116 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 A0A0B4J2A0 478 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 NXPH3O95157 252 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 TMEM50AO95807 157 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 AKR1C4P17516 323 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 RPL35AP18077 110 aaKnown RBP11.1□□□□□ -0.63
RAB40B-202ENST00000538809 OPRK1P41145 380 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 NPBWR1P48145 328 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 ZNF124Q15973 351 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 MLANAQ16655 118 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 DEFB135Q30KP9 77 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 C2orf83Q53S99 150 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 TOMM20LQ6UXN7 152 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 GBGT1Q8N5D6 347 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 SHPKQ9UHJ6 478 aa11.1□□□□□ -0.63
RAB40B-202ENST00000538809 PUS1Q9Y606 427 aaKnown RBP eCLIP11.1□□□□□ -0.63
RAB40B-202ENST00000538809 IGHV3-66A0A0C4DH42 116 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 CLN5O75503 358 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 APOHP02749 345 aaPredicted RBP11.09□□□□□ -0.63
RAB40B-202ENST00000538809 SULT1A3P0DMM9 295 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 SULT1A4P0DMN0 295 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 HTR2BP41595 481 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 APOC4P55056 127 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 ZNF600Q6ZNG1 722 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 LYZL2Q7Z4W2 148 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 APRG1Q8IVJ8 170 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 OR4X1Q8NH49 305 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 ST8SIA2Q92186 375 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 GINS3Q9BRX5 216 aa11.09□□□□□ -0.63
RAB40B-202ENST00000538809 A0A1B0GU03 582 aa11.08□□□□□ -0.64
RAB40B-202ENST00000538809 TMEM128Q5BJH2 165 aa11.08□□□□□ -0.64
RAB40B-202ENST00000538809 FAM90A2PQ658T7 463 aa11.08□□□□□ -0.64
RAB40B-202ENST00000538809 TCF24Q7RTU0 167 aa11.08□□□□□ -0.64
RAB40B-202ENST00000538809 SDHCQ99643 169 aaPredicted RBP11.08□□□□□ -0.64
RAB40B-202ENST00000538809 VSIRQ9H7M9 311 aa11.08□□□□□ -0.64
RAB40B-202ENST00000538809 HEYLQ9NQ87 328 aaPredicted RBP11.08□□□□□ -0.64
RAB40B-202ENST00000538809 HSPB7Q9UBY9 170 aa11.08□□□□□ -0.64
RAB40B-202ENST00000538809 ALMS1Q8TCU4 4167 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 HYDINQ4G0P3 5121 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 CEBPZOSA8MTT3 80 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 IGKV1-17P01599 117 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 CCR6P51684 374 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 SRPXP78539 464 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 TNFRSF9Q07011 255 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 SMCO1Q147U7 214 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 BAK1Q16611 211 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 SPANXN2Q5MJ10 180 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 LGI3Q8N145 548 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 LILRB2Q8N423 598 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 LRTM2Q8N967 370 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 SLC24A4Q8NFF2 622 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 SLC25A21Q9BQT8 299 aaPredicted RBP11.07□□□□□ -0.64
RAB40B-202ENST00000538809 MAP6D1Q9H9H5 199 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 CACFD1Q9UGQ2 172 aa11.07□□□□□ -0.64
RAB40B-202ENST00000538809 DUXBA0A1W2PPF3 345 aa11.06□□□□□ -0.64
RAB40B-202ENST00000538809 PITX3O75364 302 aa11.06□□□□□ -0.64
RAB40B-202ENST00000538809 ANXA3P12429 323 aa11.06□□□□□ -0.64
RAB40B-202ENST00000538809 TIGITQ495A1 244 aa11.06□□□□□ -0.64
RAB40B-202ENST00000538809 PRSS54Q6PEW0 395 aa11.06□□□□□ -0.64
RAB40B-202ENST00000538809 TMED4Q7Z7H5 227 aa11.06□□□□□ -0.64
RAB40B-202ENST00000538809 WFDC3Q8IUB2 231 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms