RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	GATA2	P23769	480 aa	Predicted RBP	13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	POLE	Q07864	2286 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	IGHV1-3	A0A0C4DH29	117 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	SRI	P30626	198 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ZNF525	Q8N782	197 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	GLMP	Q8WWB7	406 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	MYO7B	Q6PIF6	2116 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	FABP5P3	A8MUU1	101 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	VENTX	O95231	258 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	SELL	P14151	372 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	MRAP2	Q96G30	205 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532	HSPB9	Q9BQS6	159 aa		13.03	□□□□□ -0.32
NCAPD3-213	ENST00000534532		A6NNC1	897 aa		13.02	□□□□□ -0.32
NCAPD3-213	ENST00000534532	CLPS	P04118	112 aa		13.02	□□□□□ -0.32
NCAPD3-213	ENST00000534532	B3GALT5-AS1	P59052	145 aa		13.02	□□□□□ -0.32
NCAPD3-213	ENST00000534532	ERAS	Q7Z444	233 aa		13.02	□□□□□ -0.32
NCAPD3-213	ENST00000534532	PAM16	Q9Y3D7	125 aa		13.02	□□□□□ -0.32
NCAPD3-213	ENST00000534532	MIR17HG	Q75NE6	70 aa		13.02	□□□□□ -0.32
NCAPD3-213	ENST00000534532	OR5AN1	Q8NGI8	311 aa		13.02	□□□□□ -0.32
NCAPD3-213	ENST00000534532		H7C2G1	150 aa		13.02	□□□□□ -0.33
NCAPD3-213	ENST00000534532	TAS2R60	P59551	318 aa		13.02	□□□□□ -0.33
NCAPD3-213	ENST00000534532	TRGV11	A0A075B6L2	103 aa		13.02	□□□□□ -0.33
NCAPD3-213	ENST00000534532	TRAV21	A0A0B4J279	112 aa		13.02	□□□□□ -0.33
NCAPD3-213	ENST00000534532	GREB1	Q4ZG55	1949 aa		13.02	□□□□□ -0.33
NCAPD3-213	ENST00000534532	OVOL1	O14753	267 aa		13.02	□□□□□ -0.33
NCAPD3-213	ENST00000534532	RPL24	P83731	157 aa	Known RBP	13.02	□□□□□ -0.33
NCAPD3-213	ENST00000534532	CFAP161	Q6P656	301 aa		13.02	□□□□□ -0.33
NCAPD3-213	ENST00000534532	CACNA1D	Q01668	2161 aa		13.02	□□□□□ -0.33
NCAPD3-213	ENST00000534532		A0A1B0GUT8	65 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	FER1L6-AS1	Q8NA97	138 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	OR13C6P	Q8NH95	151 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	DOCK4	Q8N1I0	1966 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532		H3BRM9	83 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	MSMB	P08118	114 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	COL8A2	P25067	703 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	PMCHL1	Q16048	86 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	SPSB3	Q6PJ21	355 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	RNF166	Q96A37	237 aa	Predicted RBP	13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	PDCD11	Q14690	1871 aa	Known RBP	13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532		A0A1B0GW15	77 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	CXorf65	A6NEN9	183 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	MLNR	O43193	412 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	TDGF1	P13385	188 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	C15orf32	Q32M92	178 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	MUC21	Q5SSG8	566 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	FAM71F2	Q6NXP2	309 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532		E7EQL1	145 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	EGR1	P18146	543 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	OR1P1	Q8NH06	330 aa		13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.01	□□□□□ -0.33
NCAPD3-213	ENST00000534532	GRIFIN	A4D1Z8	144 aa		13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	PSMG4	Q5JS54	123 aa		13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	RNASE1	P07998	156 aa	Known RBP	13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	NHLRC3	Q5JS37	347 aa		13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	PRELID3A	Q96N28	172 aa		13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	ZNF646	O15015	1829 aa	Predicted RBP	13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	FHIT	P49789	147 aa		13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	RAMP3	O60896	148 aa		13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	NAT1	P18440	290 aa		13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	SIGLEC15	Q6ZMC9	328 aa		13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	PIP4P2	Q8N4L2	257 aa		13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	ROS1	P08922	2347 aa		13	□□□□□ -0.33
NCAPD3-213	ENST00000534532	FOLR2	P14207	255 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	SRSF7	Q16629	238 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	ZNF506	Q5JVG8	444 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	TMEM136	Q6ZRR5	245 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	ERVK11-1	P61568	191 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	TMEM170B	Q5T4T1	132 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	CD177	Q8N6Q3	437 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	VGLL1	Q99990	258 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	SOX21	Q9Y651	276 aa	Predicted RBP	12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	C7orf71	A4D174	169 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	CRP	P02741	224 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	TRGC2	P03986	189 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	KIAA1644	Q3SXP7	199 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	KLHL30-AS1	Q8NEE0	82 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	USMG5	Q96IX5	58 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	RPP21	Q9H633	154 aa	Known RBP	12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	IGKV1-12	A0A0C4DH73	117 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	IGKV1D-12	P01611	117 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	HIST1H4G	Q99525	98 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	MBNL3	Q9NUK0	354 aa	Known RBP	12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	C5orf64	Q2M2E5	130 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	NEUROG1	Q92886	237 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532		Q96MF0	132 aa		12.99	□□□□□ -0.33
NCAPD3-213	ENST00000534532	PI4KA	P42356	2102 aa		12.98	□□□□□ -0.33
NCAPD3-213	ENST00000534532	JOSD1	Q15040	202 aa	Predicted RBP	12.98	□□□□□ -0.33
NCAPD3-213	ENST00000534532	LBH	Q53QV2	105 aa	Predicted RBP	12.98	□□□□□ -0.33
NCAPD3-213	ENST00000534532	SLC25A48	Q6ZT89	311 aa	Known RBP	12.98	□□□□□ -0.33
NCAPD3-213	ENST00000534532	GAFA1	Q96PS6	74 aa		12.98	□□□□□ -0.33
NCAPD3-213	ENST00000534532	MAL	P21145	153 aa		12.98	□□□□□ -0.33
NCAPD3-213	ENST00000534532	LY6H	O94772	140 aa		12.98	□□□□□ -0.33
NCAPD3-213	ENST00000534532	LCNL1	Q6ZST4	164 aa		12.98	□□□□□ -0.33
NCAPD3-213	ENST00000534532	PSPN	O60542	156 aa		12.97	□□□□□ -0.33
NCAPD3-213	ENST00000534532	PIP4P1	Q86T03	277 aa		12.97	□□□□□ -0.33
NCAPD3-213	ENST00000534532	C18orf12	Q96KH6	178 aa		12.97	□□□□□ -0.33
NCAPD3-213	ENST00000534532	TOMM7	Q9P0U1	55 aa		12.97	□□□□□ -0.33
NCAPD3-213	ENST00000534532	PRR32	B1ATL7	298 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms