RNA–Protein interactions for RNA: ENST00000524762.5

UBXN1-204, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 763 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-204ENST00000524762 SMCO1Q147U7 214 aa14.22□□□□□ -0.13
UBXN1-204ENST00000524762 HAGHQ16775 308 aa14.22□□□□□ -0.13
UBXN1-204ENST00000524762 C2orf83Q53S99 150 aa14.22□□□□□ -0.13
UBXN1-204ENST00000524762 DEFB125Q8N687 156 aa14.22□□□□□ -0.13
UBXN1-204ENST00000524762 HEYLQ9NQ87 328 aaPredicted RBP14.22□□□□□ -0.13
UBXN1-204ENST00000524762 CACFD1Q9UGQ2 172 aa14.22□□□□□ -0.13
UBXN1-204ENST00000524762 DUXBA0A1W2PPF3 345 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 CEBPZOSA8MTT3 80 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 OR11H12B2RN74 326 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 OPRK1P41145 380 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 TNFRSF9Q07011 255 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 RBMS2Q15434 407 aaKnown RBP14.21□□□□□ -0.13
UBXN1-204ENST00000524762 ANKRD55Q3KP44 614 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 TRIQKQ629K1 86 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 RBPMS2Q6ZRY4 209 aaKnown RBP14.21□□□□□ -0.13
UBXN1-204ENST00000524762 SLC16A13Q7RTY0 426 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 LRTM2Q8N967 370 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 SLC24A4Q8NFF2 622 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 OR52B4Q8NGK2 314 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 TMEM170AQ8WVE7 144 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 HSPB7Q9UBY9 170 aa14.21□□□□□ -0.13
UBXN1-204ENST00000524762 STAB2Q8WWQ8 2551 aa14.21□□□□□ -0.14
UBXN1-204ENST00000524762 IGHV7-4-1A0A0J9YVY3 117 aa14.2□□□□□ -0.14
UBXN1-204ENST00000524762 RBMY1BA6NDE4 496 aaKnown RBP14.2□□□□□ -0.14
UBXN1-204ENST00000524762 RBMY1EA6NEQ0 496 aaKnown RBP14.2□□□□□ -0.14
UBXN1-204ENST00000524762 TSPAN4O14817 238 aa14.2□□□□□ -0.14
UBXN1-204ENST00000524762 TMEM50AO95807 157 aa14.2□□□□□ -0.14
UBXN1-204ENST00000524762 RBMY1DP0C7P1 496 aaKnown RBP14.2□□□□□ -0.14
UBXN1-204ENST00000524762 PPP1R1AQ13522 171 aa14.2□□□□□ -0.14
UBXN1-204ENST00000524762 MLANAQ16655 118 aa14.2□□□□□ -0.14
UBXN1-204ENST00000524762 OR4X1Q8NH49 305 aa14.2□□□□□ -0.14
UBXN1-204ENST00000524762 SPAG8Q99932 426 aaPredicted RBP14.2□□□□□ -0.14
UBXN1-204ENST00000524762 SRD5A3Q9H8P0 318 aa14.2□□□□□ -0.14
UBXN1-204ENST00000524762 ZFAND3Q9H8U3 227 aa14.2□□□□□ -0.14
UBXN1-204ENST00000524762 SMPXQ9UHP9 88 aa14.2□□□□□ -0.14
UBXN1-204ENST00000524762 TENM3Q9P273 2699 aa14.2□□□□□ -0.14
UBXN1-204ENST00000524762 PIGBOS1A0A0B4J2F0 54 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 A0A1B0GU03 582 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 NAP1L6A6NFF2 107 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 CHEK1O14757 476 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 CLN5O75503 358 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 YIF1AO95070 293 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 SFT2D2O95562 160 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 VAMP1P23763 118 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 TOMM20LQ6UXN7 152 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 ZNF600Q6ZNG1 722 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 CENPSQ8N2Z9 138 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 TMEM116Q8NCL8 245 aa14.19□□□□□ -0.14
UBXN1-204ENST00000524762 PITX3O75364 302 aa14.18□□□□□ -0.14
UBXN1-204ENST00000524762 NDUFB6O95139 128 aa14.18□□□□□ -0.14
UBXN1-204ENST00000524762 BTCP35070 178 aa14.18□□□□□ -0.14
UBXN1-204ENST00000524762 INPP1P49441 399 aa14.18□□□□□ -0.14
UBXN1-204ENST00000524762 LAMTOR1Q6IAA8 161 aa14.18□□□□□ -0.14
UBXN1-204ENST00000524762 RNASEH2CQ8TDP1 164 aaKnown RBP14.18□□□□□ -0.14
UBXN1-204ENST00000524762 SPATA25Q9BR10 227 aa14.18□□□□□ -0.14
UBXN1-204ENST00000524762 RHPN1-AS1Q9BWJ2 59 aa14.18□□□□□ -0.14
UBXN1-204ENST00000524762 HIPK2Q9H2X6 1198 aa14.18□□□□□ -0.14
UBXN1-204ENST00000524762 RBKSQ9H477 322 aa14.18□□□□□ -0.14
UBXN1-204ENST00000524762 PUS1Q9Y606 427 aaKnown RBP eCLIP14.18□□□□□ -0.14
UBXN1-204ENST00000524762 TRAV14DV4A0A0A6YYC5 116 aa14.17□□□□□ -0.14
UBXN1-204ENST00000524762 RPS10-NUDT3A0A1W2PQS6 291 aa14.17□□□□□ -0.14
UBXN1-204ENST00000524762 IL7P13232 177 aa14.17□□□□□ -0.14
UBXN1-204ENST00000524762 NPY1RP25929 384 aa14.17□□□□□ -0.14
UBXN1-204ENST00000524762 UBE2MP61081 183 aaKnown RBP14.17□□□□□ -0.14
UBXN1-204ENST00000524762 DTD1Q8TEA8 209 aa14.17□□□□□ -0.14
UBXN1-204ENST00000524762 RNF2Q99496 336 aa14.17□□□□□ -0.14
UBXN1-204ENST00000524762 IGHV3-49A0A0A0MS15 119 aa14.16□□□□□ -0.14
UBXN1-204ENST00000524762 IGKV1-17P01599 117 aa14.16□□□□□ -0.14
UBXN1-204ENST00000524762 SLC25A6P12236 298 aa14.16□□□□□ -0.14
UBXN1-204ENST00000524762 PRSS54Q6PEW0 395 aa14.16□□□□□ -0.14
UBXN1-204ENST00000524762 OR1S1Q8NH92 325 aa14.16□□□□□ -0.14
UBXN1-204ENST00000524762 CITED4Q96RK1 184 aa14.16□□□□□ -0.14
UBXN1-204ENST00000524762 C7orf50Q9BRJ6 194 aaKnown RBP14.16□□□□□ -0.14
UBXN1-204ENST00000524762 GINS3Q9BRX5 216 aa14.16□□□□□ -0.14
UBXN1-204ENST00000524762 DNAH7Q8WXX0 4024 aa14.15□□□□□ -0.14
UBXN1-204ENST00000524762 SLC25A4P12235 298 aa14.15□□□□□ -0.14
UBXN1-204ENST00000524762 FAM90A2PQ658T7 463 aa14.15□□□□□ -0.14
UBXN1-204ENST00000524762 VSIRQ9H7M9 311 aa14.15□□□□□ -0.14
UBXN1-204ENST00000524762 FLVCR2Q9UPI3 526 aa14.15□□□□□ -0.14
UBXN1-204ENST00000524762 TMED3Q9Y3Q3 217 aa14.15□□□□□ -0.14
UBXN1-204ENST00000524762 U3KQ87 197 aa14.15□□□□□ -0.14
UBXN1-204ENST00000524762 TRAV30A0A087WSZ9 112 aa14.14□□□□□ -0.15
UBXN1-204ENST00000524762 LINC00854A0A1B0GVQ3 168 aa14.14□□□□□ -0.15
UBXN1-204ENST00000524762 SCGB2A1O75556 95 aa14.14□□□□□ -0.15
UBXN1-204ENST00000524762 IFNA10P01566 189 aa14.14□□□□□ -0.15
UBXN1-204ENST00000524762 APOHP02749 345 aaPredicted RBP14.14□□□□□ -0.15
UBXN1-204ENST00000524762 IGLC1P0CG04 106 aa14.14□□□□□ -0.15
UBXN1-204ENST00000524762 RND2P52198 227 aa14.14□□□□□ -0.15
UBXN1-204ENST00000524762 ODF3L2Q3SX64 289 aa14.14□□□□□ -0.15
UBXN1-204ENST00000524762 TIGITQ495A1 244 aa14.14□□□□□ -0.15
UBXN1-204ENST00000524762 NOXA1Q86UR1 476 aa14.14□□□□□ -0.15
UBXN1-204ENST00000524762 ST8SIA2Q92186 375 aa14.14□□□□□ -0.15
UBXN1-204ENST00000524762 IGHV3OR16-13A0A075B7E8 117 aa14.13□□□□□ -0.15
UBXN1-204ENST00000524762 IGHV3-74A0A0B4J1X5 117 aa14.13□□□□□ -0.15
UBXN1-204ENST00000524762 C9orf170A2RU37 121 aa14.13□□□□□ -0.15
UBXN1-204ENST00000524762 OR4C46A6NHA9 309 aa14.13□□□□□ -0.15
UBXN1-204ENST00000524762 ETFRF1Q6IPR1 90 aa14.13□□□□□ -0.15
UBXN1-204ENST00000524762 OR1S2Q8NGQ3 325 aa14.13□□□□□ -0.15
UBXN1-204ENST00000524762 FAM110AQ9BQ89 295 aa14.13□□□□□ -0.15
UBXN1-204ENST00000524762 RETNQ9HD89 108 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms