RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 PRELID3BQ9Y3B1 194 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 ROBO3Q96MS0 1386 aa1.17□□□□□ -2.22
SQLE-202ENST00000518604 RIC1Q4ADV7 1423 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 FAM236DA0A1B0GTK5 79 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 PQLC2LA1A4F0 135 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 FAM159BA6NKW6 160 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 TMEM212A6NML5 194 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 FAAHO00519 579 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 IFNA10P01566 189 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 FAM236CP0DP71 79 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 RNASE3P12724 160 aaKnown RBP1.16□□□□□ -2.22
SQLE-202ENST00000518604 G0S2P27469 103 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 EDDM3AQ14507 147 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 ZNF846Q147U1 533 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 AKIRIN2Q53H80 203 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 TMEM97Q5BJF2 176 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 LINC00471Q8N535 108 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 C15orf53Q8NAA6 179 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 PXT1Q8NFP0 134 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 TOMM6Q96B49 74 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 REG4Q9BYZ8 158 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 TRABDQ9H4I3 376 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 FBXO5Q9UKT4 447 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 SNURFQ9Y675 71 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 TMEM56-RWDD3S4R434 201 aa1.16□□□□□ -2.22
SQLE-202ENST00000518604 COL6A6A6NMZ7 2263 aa1.15□□□□□ -2.22
SQLE-202ENST00000518604 DOCK3Q8IZD9 2030 aa1.15□□□□□ -2.22
SQLE-202ENST00000518604 TRAV14DV4A0A0A6YYC5 116 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 A0A0D9SG52 128 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 DPRXA6NFQ7 191 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 TTRP02766 147 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 COX6A1P12074 109 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 RPL5P46777 297 aaKnown RBP1.15□□□□□ -2.23
SQLE-202ENST00000518604 RPS20P60866 119 aaKnown RBP1.15□□□□□ -2.23
SQLE-202ENST00000518604 VBP1P61758 197 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 MRPS25P82663 173 aaKnown RBP1.15□□□□□ -2.23
SQLE-202ENST00000518604 HACD4Q5VWC8 232 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 MIR17HGQ75NE6 70 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 OR52L1Q8NGH7 329 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 OR4C6Q8NH72 309 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 TSPAN32Q96QS1 320 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 PRRT1Q99946 306 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 MIXL1Q9H2W2 232 aa1.15□□□□□ -2.23
SQLE-202ENST00000518604 RALGAPA2Q2PPJ7 1873 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 MAST2Q6P0Q8 1798 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 NEO1Q92859 1461 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 OR4C46A6NHA9 309 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 TMED2Q15363 201 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 SPANXN5Q5MJ07 72 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 TEX36Q5VZQ5 186 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 C12orf45Q8N5I9 185 aaPredicted RBP1.14□□□□□ -2.23
SQLE-202ENST00000518604 ANKRD29Q8N6D5 301 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 TERB2Q8NHR7 220 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 AQP3Q92482 292 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 AP3S1Q92572 193 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 DCUN1D1Q96GG9 259 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 HOPXQ9BPY8 73 aaPredicted RBP1.14□□□□□ -2.23
SQLE-202ENST00000518604 GINS4Q9BRT9 223 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 C20orf27Q9GZN8 174 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 RNASE7Q9H1E1 156 aaKnown RBP1.14□□□□□ -2.23
SQLE-202ENST00000518604 C14orf105Q9NVL8 296 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 TP73-AS1Q9UF72 201 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 FREM1Q5H8C1 2179 aa1.14□□□□□ -2.23
SQLE-202ENST00000518604 PBRM1Q86U86 1689 aa1.13□□□□□ -2.23
SQLE-202ENST00000518604 BAZ2BQ9UIF8 2168 aaKnown RBP1.13□□□□□ -2.23
SQLE-202ENST00000518604 TRAV9-1A0A075B6T8 112 aa1.13□□□□□ -2.23
SQLE-202ENST00000518604 TRAV26-2A0A0B4J265 109 aa1.13□□□□□ -2.23
SQLE-202ENST00000518604 EXOC1LA0A1B0GW35 172 aa1.13□□□□□ -2.23
SQLE-202ENST00000518604 HIST1H3AP68431 136 aa1.13□□□□□ -2.23
SQLE-202ENST00000518604 H3F3AP84243 136 aa1.13□□□□□ -2.23
SQLE-202ENST00000518604 KRR1Q13601 381 aaKnown RBP1.13□□□□□ -2.23
SQLE-202ENST00000518604 IAH1Q2TAA2 248 aaPredicted RBP1.13□□□□□ -2.23
SQLE-202ENST00000518604 H1FXQ92522 213 aaKnown RBP1.13□□□□□ -2.23
SQLE-202ENST00000518604 SIGMAR1Q99720 223 aa1.13□□□□□ -2.23
SQLE-202ENST00000518604 ARMC1Q9NVT9 282 aa1.13□□□□□ -2.23
SQLE-202ENST00000518604 ARL2BPQ9Y2Y0 163 aa1.13□□□□□ -2.23
SQLE-202ENST00000518604 ARL5AQ9Y689 179 aa1.13□□□□□ -2.23
SQLE-202ENST00000518604 DOCK5Q9H7D0 1870 aa1.13□□□□□ -2.23
SQLE-202ENST00000518604 hADV38S2A0JD32 116 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 E5RI56 91 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 GEMIN2O14893 280 aaKnown RBP1.12□□□□□ -2.23
SQLE-202ENST00000518604 OR7C1O76099 320 aaPredicted RBP1.12□□□□□ -2.23
SQLE-202ENST00000518604 ZNF682O95780 498 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 TCL1BO95988 128 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 C1QBP02746 253 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 FABP1P07148 127 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 CTSDP07339 412 aaPredicted RBP1.12□□□□□ -2.23
SQLE-202ENST00000518604 DEFA1P59665 94 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 KCNJ8Q15842 424 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 DEFB115Q30KQ5 88 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 C12orf74Q32Q52 190 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 LIN52Q52LA3 116 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 DPPA3Q6W0C5 159 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 Q6ZQT0 140 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 PHF13Q86YI8 300 aaPredicted RBP1.12□□□□□ -2.23
SQLE-202ENST00000518604 NEK7Q8TDX7 302 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 ODF3Q96PU9 254 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 C11orf68Q9H3H3 251 aaKnown RBP1.12□□□□□ -2.23
SQLE-202ENST00000518604 SLC39A9Q9NUM3 307 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 SMPXQ9UHP9 88 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms