RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 HRH1P35367 487 aa8□□□□□ -1.13
RNF4-218ENST00000513284 NCS1P62166 190 aa8□□□□□ -1.13
RNF4-218ENST00000513284 PRCDQ00LT1 54 aa8□□□□□ -1.13
RNF4-218ENST00000513284 PHLDA2Q53GA4 152 aa8□□□□□ -1.13
RNF4-218ENST00000513284 SOHLH1Q5JUK2 328 aa8□□□□□ -1.13
RNF4-218ENST00000513284 LEMD1Q68G75 181 aa8□□□□□ -1.13
RNF4-218ENST00000513284 LYSMD2Q8IV50 215 aa8□□□□□ -1.13
RNF4-218ENST00000513284 CENPSQ8N2Z9 138 aa8□□□□□ -1.13
RNF4-218ENST00000513284 LILRB2Q8N423 598 aa8□□□□□ -1.13
RNF4-218ENST00000513284 FAM24BQ8N5W8 94 aa8□□□□□ -1.13
RNF4-218ENST00000513284 ZNF114Q8NC26 417 aa8□□□□□ -1.13
RNF4-218ENST00000513284 CSNK1G2-AS1Q8NCQ2 148 aa8□□□□□ -1.13
RNF4-218ENST00000513284 DUSP18Q8NEJ0 188 aa8□□□□□ -1.13
RNF4-218ENST00000513284 OR10C1Q96KK4 312 aa8□□□□□ -1.13
RNF4-218ENST00000513284 NXF2Q9GZY0 626 aaKnown RBP8□□□□□ -1.13
RNF4-218ENST00000513284 SCPEP1Q9HB40 452 aa8□□□□□ -1.13
RNF4-218ENST00000513284 A0A1W2PS18 150 aa7.99□□□□□ -1.13
RNF4-218ENST00000513284 DNASE2O00115 360 aaPredicted RBP7.99□□□□□ -1.13
RNF4-218ENST00000513284 ST8SIA3O43173 380 aa7.99□□□□□ -1.13
RNF4-218ENST00000513284 MT-CO2P00403 227 aa7.99□□□□□ -1.13
RNF4-218ENST00000513284 CTSGP08311 255 aa7.99□□□□□ -1.13
RNF4-218ENST00000513284 HLA-DMAP28067 261 aa7.99□□□□□ -1.13
RNF4-218ENST00000513284 RCVRNP35243 200 aa7.99□□□□□ -1.13
RNF4-218ENST00000513284 SNCAP37840 140 aa7.99□□□□□ -1.13
RNF4-218ENST00000513284 SUB1P53999 127 aaKnown RBP eCLIP7.99□□□□□ -1.13
RNF4-218ENST00000513284 UCP3P55916 312 aa7.99□□□□□ -1.13
RNF4-218ENST00000513284 DEFB131AP59861 70 aa7.99□□□□□ -1.13
RNF4-218ENST00000513284 HSPE1P61604 102 aaKnown RBP7.99□□□□□ -1.13
RNF4-218ENST00000513284 VBP1P61758 197 aa7.99□□□□□ -1.13
RNF4-218ENST00000513284 TBC1D26Q86UD7 250 aa7.99□□□□□ -1.13
RNF4-218ENST00000513284 PINX1Q96BK5 328 aaKnown RBP7.99□□□□□ -1.13
RNF4-218ENST00000513284 NARS2Q96I59 477 aaKnown RBP7.99□□□□□ -1.13
RNF4-218ENST00000513284 SRRM2Q9UQ35 2752 aaKnown RBP7.99□□□□□ -1.13
RNF4-218ENST00000513284 IGHV3OR16-13A0A075B7E8 117 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 IGHV3-74A0A0B4J1X5 117 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 TRAV2A0A0B4J234 112 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 I3L2K1 104 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 APOA1P02647 267 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 C4BPBP20851 252 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 AKR1C2P52895 323 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 RPL11P62913 178 aaKnown RBP7.98□□□□□ -1.13
RNF4-218ENST00000513284 TMEM41BQ5BJD5 291 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 ZNF600Q6ZNG1 722 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 TCF24Q7RTU0 167 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 SLC35G3Q8N808 338 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 GPX8Q8TED1 209 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 ZNF486Q96H40 463 aaPredicted RBP7.98□□□□□ -1.13
RNF4-218ENST00000513284 ENY2Q9NPA8 101 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 COMMD3Q9UBI1 195 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 VPS13BQ7Z7G8 4022 aa7.98□□□□□ -1.13
RNF4-218ENST00000513284 IFNA21P01568 189 aa7.97□□□□□ -1.13
RNF4-218ENST00000513284 IFNA17P01571 189 aa7.97□□□□□ -1.13
RNF4-218ENST00000513284 SMIM18P0DKX4 95 aa7.97□□□□□ -1.13
RNF4-218ENST00000513284 INAFM2P0DMQ5 153 aa7.97□□□□□ -1.13
RNF4-218ENST00000513284 EIF2B2P49770 351 aaKnown RBP7.97□□□□□ -1.13
RNF4-218ENST00000513284 CTF1Q16619 201 aa7.97□□□□□ -1.13
RNF4-218ENST00000513284 TRPT1Q86TN4 253 aaKnown RBP7.97□□□□□ -1.13
RNF4-218ENST00000513284 STHQ8IWL8 128 aa7.97□□□□□ -1.13
RNF4-218ENST00000513284 MRGPRFQ96AM1 343 aa7.97□□□□□ -1.13
RNF4-218ENST00000513284 SEC22AQ96IW7 307 aa7.97□□□□□ -1.13
RNF4-218ENST00000513284 CLEC5AQ9NY25 188 aa7.97□□□□□ -1.13
RNF4-218ENST00000513284 DBX1A6NMT0 343 aa7.96□□□□□ -1.14
RNF4-218ENST00000513284 APOHP02749 345 aaPredicted RBP7.96□□□□□ -1.14
RNF4-218ENST00000513284 PGAM2P15259 253 aa7.96□□□□□ -1.14
RNF4-218ENST00000513284 ELK1P19419 428 aa7.96□□□□□ -1.14
RNF4-218ENST00000513284 RNF212Q495C1 297 aa7.96□□□□□ -1.14
RNF4-218ENST00000513284 MZT2AQ6P582 158 aa7.96□□□□□ -1.14
RNF4-218ENST00000513284 TOMM20LQ6UXN7 152 aa7.96□□□□□ -1.14
RNF4-218ENST00000513284 SNX29P2Q8IUI4 249 aa7.96□□□□□ -1.14
RNF4-218ENST00000513284 CCDC71LQ8N9Z2 235 aa7.96□□□□□ -1.14
RNF4-218ENST00000513284 RNASE11Q8TAA1 199 aaKnown RBP7.96□□□□□ -1.14
RNF4-218ENST00000513284 METTL26Q96S19 204 aa7.96□□□□□ -1.14
RNF4-218ENST00000513284 NAA50Q9GZZ1 169 aaKnown RBP7.96□□□□□ -1.14
RNF4-218ENST00000513284 VSIRQ9H7M9 311 aa7.96□□□□□ -1.14
RNF4-218ENST00000513284 RPS10-NUDT3A0A1W2PQS6 291 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 EPM2AB3EWF7 344 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 INS-IGF2F8WCM5 200 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 HPGDSO60760 199 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 B3GALNT1O75752 331 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 GABARAPO95166 117 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 NPPCP23582 126 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 HOXA1P49639 335 aaPredicted RBP7.95□□□□□ -1.14
RNF4-218ENST00000513284 RORCP51449 518 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 RND3P61587 244 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 TRIM16LQ309B1 348 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 RNASE10Q5GAN6 216 aaKnown RBP7.95□□□□□ -1.14
RNF4-218ENST00000513284 MORN3Q6PF18 240 aaPredicted RBP7.95□□□□□ -1.14
RNF4-218ENST00000513284 UBE2DNLQ8IWF7 75 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 ARRDC1Q8N5I2 433 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 C15orf40Q8WUR7 153 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 AP3S1Q92572 193 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 RRNAD1Q96FB5 475 aaKnown RBP7.95□□□□□ -1.14
RNF4-218ENST00000513284 GRAMD2BQ96HH9 432 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 MS4A6AQ9H2W1 248 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 COPZ2Q9P299 210 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 RABAC1Q9UI14 185 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 TBC1D24Q9ULP9 559 aa7.95□□□□□ -1.14
RNF4-218ENST00000513284 PUS1Q9Y606 427 aaKnown RBP eCLIP7.95□□□□□ -1.14
RNF4-218ENST00000513284 TRAV30A0A087WSZ9 112 aa7.94□□□□□ -1.14
RNF4-218ENST00000513284 KNCNA6PVL3 124 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms