RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 HAPLN4Q86UW8 402 aa9.83□□□□□ -0.84
PRDM16-207ENST00000512462 OR4C13Q8NGP0 309 aa9.83□□□□□ -0.84
PRDM16-207ENST00000512462 RNASE6Q93091 150 aaKnown RBP9.83□□□□□ -0.84
PRDM16-207ENST00000512462 PSMG3Q9BT73 122 aaPredicted RBP9.83□□□□□ -0.84
PRDM16-207ENST00000512462 WASHC3Q9Y3C0 194 aa9.83□□□□□ -0.84
PRDM16-207ENST00000512462 NACAE9PAV3 2078 aa9.83□□□□□ -0.84
PRDM16-207ENST00000512462 M0R143 59 aa9.83□□□□□ -0.84
PRDM16-207ENST00000512462 TREML4Q6UXN2 200 aa9.83□□□□□ -0.84
PRDM16-207ENST00000512462 DPPA3Q6W0C5 159 aa9.83□□□□□ -0.84
PRDM16-207ENST00000512462 C1QL4Q86Z23 238 aa9.83□□□□□ -0.84
PRDM16-207ENST00000512462 PRNTQ86SH4 94 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 VPS25Q9BRG1 176 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 RNASE7Q9H1E1 156 aaKnown RBP9.82□□□□□ -0.84
PRDM16-207ENST00000512462 DKK4Q9UBT3 224 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 TNRC6BQ9UPQ9 1833 aaKnown RBP9.82□□□□□ -0.84
PRDM16-207ENST00000512462 ZNF785A8K8V0 405 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 WNT2P09544 360 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 KLRD1Q13241 179 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 ADIPOQQ15848 244 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 RPEL1Q2QD12 228 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 C22orf34Q6ZV56 151 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 SDF2L1Q9HCN8 221 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 LINC00527Q9UJ94 153 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 A8MWP6 167 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 ZNF207O43670 478 aaKnown RBP9.82□□□□□ -0.84
PRDM16-207ENST00000512462 PDE6DO43924 150 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 LYL1P12980 280 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 GNG5P63218 68 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 ELOBQ15370 118 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 CENPWQ5EE01 88 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 VN1R17PQ8TDU5 208 aa9.82□□□□□ -0.84
PRDM16-207ENST00000512462 MBNL3Q9NUK0 354 aaKnown RBP9.82□□□□□ -0.84
PRDM16-207ENST00000512462 CHTOPQ9Y3Y2 248 aaKnown RBP9.82□□□□□ -0.84
PRDM16-207ENST00000512462 FASNP49327 2511 aaKnown RBP9.82□□□□□ -0.84
PRDM16-207ENST00000512462 HCFC1P51610 2035 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 A1L4Q6 167 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 YPEL1O60688 119 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 COL8A2P25067 703 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 YPEL2Q96QA6 119 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 TMEM167BQ9NRX6 74 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 MBD3L4A6NDZ8 208 aaPredicted RBP9.81□□□□□ -0.84
PRDM16-207ENST00000512462 MBD3L3A6NE82 208 aaPredicted RBP9.81□□□□□ -0.84
PRDM16-207ENST00000512462 MBD3L5A6NJ08 208 aaPredicted RBP9.81□□□□□ -0.84
PRDM16-207ENST00000512462 COL8A1P27658 744 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 ERVK11-1P61568 191 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 ATOH7Q8N100 152 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 MBD3L2Q8NHZ7 208 aaPredicted RBP9.81□□□□□ -0.84
PRDM16-207ENST00000512462 C15orf62A8K5M9 175 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 B4DEV8 164 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 USF1P22415 310 aaPredicted RBP9.81□□□□□ -0.84
PRDM16-207ENST00000512462 TMPRSS3P57727 454 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 LY6EQ16553 131 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 C11orf53Q8IXP5 236 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 CLUHP3Q96NS8 147 aa9.81□□□□□ -0.84
PRDM16-207ENST00000512462 A0A1B0GUS0 222 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HSBP1L1C9JCN9 74 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 LINC00614P0C842 121 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 APOBEC3AP31941 199 aaPredicted RBP9.8□□□□□ -0.84
PRDM16-207ENST00000512462 FOXA3P55318 350 aaPredicted RBP9.8□□□□□ -0.84
PRDM16-207ENST00000512462 ZNF726P1Q15940 193 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 TBR1Q16650 682 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 TMEM200BQ69YZ2 307 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 ASPMQ8IZT6 3477 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 SH2D7A6NKC9 451 aaPredicted RBP9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HIST1H2BKO60814 126 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 SCGB2A1O75556 95 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HIST1H2BJP06899 126 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HIST1H2BOP23527 126 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 FCGR2BP31994 310 aaPredicted RBP9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HIST1H2BBP33778 126 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 CSN1S1P47710 185 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HIST1H2BDP58876 126 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HIST1H2BCP62807 126 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HIST2H2BEQ16778 126 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.8□□□□□ -0.84
PRDM16-207ENST00000512462 CFAP161Q6P656 301 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 LINC00305Q7Z4B0 112 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HIST1H2BHQ93079 126 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HIST1H2BNQ99877 126 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 HIST1H2BMQ99879 126 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 IFI27L2Q9H2X8 130 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 DNAJC4Q9NNZ3 241 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 NAGKQ9UJ70 344 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 RPLP1P05386 114 aaKnown RBP9.8□□□□□ -0.84
PRDM16-207ENST00000512462 CEACAM8P31997 349 aaPredicted RBP9.8□□□□□ -0.84
PRDM16-207ENST00000512462 RBX1P62877 108 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 IBA57Q5T440 356 aaKnown RBP9.8□□□□□ -0.84
PRDM16-207ENST00000512462 TMEM14EPQ6UXP3 125 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 ZNF664Q8N3J9 261 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 LINC00479Q96M42 142 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 GGTLC1Q9BX51 225 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 ARL2-SNX15V9GYD0 113 aa9.8□□□□□ -0.84
PRDM16-207ENST00000512462 C15orf61A6NNL5 157 aa9.79□□□□□ -0.84
PRDM16-207ENST00000512462 GAFA1Q96PS6 74 aa9.79□□□□□ -0.84
PRDM16-207ENST00000512462 ZNF586Q9NXT0 402 aa9.79□□□□□ -0.84
PRDM16-207ENST00000512462 RPUSD1Q9UJJ7 312 aaKnown RBP9.79□□□□□ -0.84
PRDM16-207ENST00000512462 LOC102724200A0A096LPH7 203 aaPredicted RBP9.79□□□□□ -0.84
PRDM16-207ENST00000512462 TM4SF5O14894 197 aa9.79□□□□□ -0.84
PRDM16-207ENST00000512462 EFNB3Q15768 340 aa9.79□□□□□ -0.84
PRDM16-207ENST00000512462 MBNL2Q5VZF2 373 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms