RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	EEF1AKMT3	Q96AZ1	226 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	C21orf62	Q9NYP8	219 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	MBD2	Q9UBB5	411 aa		11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	PEF1	Q9UBV8	284 aa	Known RBP	11.16	□□□□□ -0.62
MATR3-238	ENST00000512107	IGKV1D-37	A0A075B6S9	117 aa		11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	IGHV3-35	A0A0C4DH35	117 aa		11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	TSC22D2	O75157	780 aa		11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	HSPB1	P04792	205 aa	Known RBP	11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	LYL1	P12980	280 aa		11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	OPRK1	P41145	380 aa		11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	SUB1	P53999	127 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	SLC16A13	Q7RTY0	426 aa		11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	LINC00482	Q8N8I6	264 aa		11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	OR1L6	Q8NGR2	347 aa		11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	DLX4	Q92988	240 aa	Predicted RBP	11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	CIB3	Q96Q77	187 aa	Predicted RBP	11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	CACFD1	Q9UGQ2	172 aa		11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	STRAP	Q9Y3F4	350 aa	Known RBP	11.15	□□□□□ -0.62
MATR3-238	ENST00000512107	IGKV1OR2-108	A0A075B7D4	117 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	CST7	O76096	145 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	OR2C1	O95371	312 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	IFNA4	P05014	189 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	CTSG	P08311	255 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	GIP	P09681	153 aa	Predicted RBP	11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	OR8U8	P0C7N1	319 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	TAS2R30	P59541	319 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	GAMT	Q14353	236 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	OR8G2P	Q6IF36	304 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	ACSM6	Q6P461	480 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	TMEM252	Q8N6L7	170 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	UBAC2	Q8NBM4	344 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	DCUN1D4	Q92564	292 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	ST6GAL2	Q96JF0	529 aa		11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	RANGRF	Q9HD47	186 aa	Predicted RBP	11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	LYRM2	Q9NU23	88 aa	Predicted RBP	11.14	□□□□□ -0.63
MATR3-238	ENST00000512107	WNK1	Q9H4A3	2382 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	IGHV3OR16-8	A0A075B7F1	116 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	TRBV7-1	A0A0A6YYK4	115 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	LINC01619	G3V211	115 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107		L7N2F9	121 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	IGKV1-17	P01599	117 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	HOXD3	P31249	432 aa	Predicted RBP	11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	ARL3	P36405	182 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	MYCNOS	P40205	109 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	BCAP31	P51572	246 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	RND2	P52198	227 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	MFAP4	P55083	255 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	VAMP2	P63027	116 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	CYCS	P99999	105 aa	Known RBP	11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	NHLH2	Q02577	135 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	ZNF616	Q08AN1	781 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	TIGIT	Q495A1	244 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107		Q56UQ5	140 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	UNQ9165/PRO28630	Q6UXU0	137 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	ACOT7L	Q6ZUV0	252 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	NPIPB3	Q92617	1050 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	CXorf58	Q96LI9	332 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	THYN1	Q9P016	225 aa		11.13	□□□□□ -0.63
MATR3-238	ENST00000512107	TGOLN2	O43493	480 aa		11.12	□□□□□ -0.63
MATR3-238	ENST00000512107	FCGR2B	P31994	310 aa	Predicted RBP	11.12	□□□□□ -0.63
MATR3-238	ENST00000512107	CAV2	P51636	162 aa		11.12	□□□□□ -0.63
MATR3-238	ENST00000512107	KLF5	Q13887	457 aa	Predicted RBP	11.12	□□□□□ -0.63
MATR3-238	ENST00000512107	IL34	Q6ZMJ4	242 aa		11.12	□□□□□ -0.63
MATR3-238	ENST00000512107	ADAMTSL5	Q6ZMM2	481 aa		11.12	□□□□□ -0.63
MATR3-238	ENST00000512107	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.12	□□□□□ -0.63
MATR3-238	ENST00000512107	OR11H4	Q8NGC9	324 aa		11.12	□□□□□ -0.63
MATR3-238	ENST00000512107	OR4X1	Q8NH49	305 aa		11.12	□□□□□ -0.63
MATR3-238	ENST00000512107	ACY3	Q96HD9	319 aa		11.12	□□□□□ -0.63
MATR3-238	ENST00000512107	PKD1L1	Q8TDX9	2849 aa		11.12	□□□□□ -0.63
MATR3-238	ENST00000512107		E5RGE8	158 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107		M0QZ24	198 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	CORT	O00230	105 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	CLN5	O75503	358 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	IGLC1	P0CG04	106 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	GPX4	P36969	197 aa	Predicted RBP	11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	P2RY1	P47900	373 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	SYNJ2BP	P57105	145 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	RAP2B	P61225	183 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	RAB11A	P62491	216 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.11	□□□□□ -0.63	5e-9	■■■□□ 16
MATR3-238	ENST00000512107	TMEM116	Q8NCL8	245 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	RCC1L	Q96I51	464 aa	Known RBP	11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	WFDC1	Q9HC57	220 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	SELENOK	Q9Y6D0	94 aa		11.11	□□□□□ -0.63
MATR3-238	ENST00000512107	CYB5B	O43169	146 aa		11.1	□□□□□ -0.63
MATR3-238	ENST00000512107	ATP5I	P56385	69 aa	Predicted RBP	11.1	□□□□□ -0.63
MATR3-238	ENST00000512107	TMEM217	Q8N7C4	229 aa		11.1	□□□□□ -0.63
MATR3-238	ENST00000512107	OR4F17	Q8NGA8	305 aa		11.1	□□□□□ -0.63
MATR3-238	ENST00000512107	OR2T35	Q8NGX2	323 aa		11.1	□□□□□ -0.63
MATR3-238	ENST00000512107	DPF1	Q92782	380 aa		11.1	□□□□□ -0.63
MATR3-238	ENST00000512107	OR4F4	Q96R69	305 aa		11.1	□□□□□ -0.63
MATR3-238	ENST00000512107	GGCT	O75223	188 aa	Known RBP	11.09	□□□□□ -0.63
MATR3-238	ENST00000512107	SULT1A1	P50225	295 aa		11.09	□□□□□ -0.63
MATR3-238	ENST00000512107	RPP30	P78346	268 aa	Known RBP	11.09	□□□□□ -0.63
MATR3-238	ENST00000512107	ZNF90	Q03938	601 aa		11.09	□□□□□ -0.63
MATR3-238	ENST00000512107	SLC38A11	Q08AI6	406 aa		11.09	□□□□□ -0.63
MATR3-238	ENST00000512107	PRR31	Q5SQ13	230 aa		11.09	□□□□□ -0.63
MATR3-238	ENST00000512107	THAP8	Q8NA92	274 aa		11.09	□□□□□ -0.63
MATR3-238	ENST00000512107	TXN2	Q99757	166 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms