RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 SLC25A21Q9BQT8 299 aaPredicted RBP8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 SMPXQ9UHP9 88 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 DNAH7Q8WXX0 4024 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 RBMY1BA6NDE4 496 aaKnown RBP8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 RBMY1EA6NEQ0 496 aaKnown RBP8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 TSPAN4O14817 238 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 RBMY1DP0C7P1 496 aaKnown RBP8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 ANXA3P12429 323 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 HTR2BP41595 481 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 CCR6P51684 374 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 C2orf83Q53S99 150 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 SLC16A13Q7RTY0 426 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 TMED4Q7Z7H5 227 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 OR52B4Q8NGK2 314 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 TMEM170AQ8WVE7 144 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 SRD5A3Q9H8P0 318 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 HEYLQ9NQ87 328 aaPredicted RBP8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 NDUFA13Q9P0J0 144 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 IGHV7-4-1A0A0J9YVY3 117 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 CEBPZOSA8MTT3 80 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 CHEK1O14757 476 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 YIF1AO95070 293 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 NXPH3O95157 252 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 OPRK1P41145 380 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 SRPXP78539 464 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 SMCO1Q147U7 214 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 ANKRD55Q3KP44 614 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 TOMM20LQ6UXN7 152 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 OR4X1Q8NH49 305 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 SPAG8Q99932 426 aaPredicted RBP8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 CACFD1Q9UGQ2 172 aa8.68□□□□□ -1.02
SH3RF1-205ENST00000511421 CLN5O75503 358 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 TNFRSF9Q07011 255 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 LAMTOR1Q6IAA8 161 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 ZNF600Q6ZNG1 722 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 LRTM2Q8N967 370 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 TMEM116Q8NCL8 245 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 SLC24A4Q8NFF2 622 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 RNF2Q99496 336 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 SPATA25Q9BR10 227 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 RHPN1-AS1Q9BWJ2 59 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 ZFAND3Q9H8U3 227 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 HSPB7Q9UBY9 170 aa8.67□□□□□ -1.02
SH3RF1-205ENST00000511421 KMT2CQ8NEZ4 4911 aaKnown RBP8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 NBEAL2Q6ZNJ1 2754 aa8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 IGHV3-49A0A0A0MS15 119 aa8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 TRAV14DV4A0A0A6YYC5 116 aa8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 A0A1B0GU03 582 aa8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 DUXBA0A1W2PPF3 345 aa8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 PITX3O75364 302 aa8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 SFT2D2O95562 160 aa8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 IGKV1-17P01599 117 aa8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 PPP1R1AQ13522 171 aa8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 RBMS2Q15434 407 aaKnown RBP8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 TRIQKQ629K1 86 aa8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 RNASEH2CQ8TDP1 164 aaKnown RBP8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 CITED4Q96RK1 184 aa8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 PUS1Q9Y606 427 aaKnown RBP eCLIP8.66□□□□□ -1.02
SH3RF1-205ENST00000511421 NAP1L6A6NFF2 107 aa8.65□□□□□ -1.02
SH3RF1-205ENST00000511421 VAMP1P23763 118 aa8.65□□□□□ -1.02
SH3RF1-205ENST00000511421 NPY1RP25929 384 aa8.65□□□□□ -1.02
SH3RF1-205ENST00000511421 FAM90A2PQ658T7 463 aa8.65□□□□□ -1.02
SH3RF1-205ENST00000511421 PRSS54Q6PEW0 395 aa8.65□□□□□ -1.02
SH3RF1-205ENST00000511421 CENPSQ8N2Z9 138 aa8.65□□□□□ -1.02
SH3RF1-205ENST00000511421 HIPK2Q9H2X6 1198 aa8.65□□□□□ -1.02
SH3RF1-205ENST00000511421 RBKSQ9H477 322 aa8.65□□□□□ -1.02
SH3RF1-205ENST00000511421 IGHV3OR16-13A0A075B7E8 117 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 IGHV3-74A0A0B4J1X5 117 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 PIGBOS1A0A0B4J2F0 54 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 RPS10-NUDT3A0A1W2PQS6 291 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 NDUFB6O95139 128 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 APOHP02749 345 aaPredicted RBP8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 BTCP35070 178 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 ODF3L2Q3SX64 289 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 LILRB2Q8N423 598 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 DTD1Q8TEA8 209 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 GINS3Q9BRX5 216 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 VSIRQ9H7M9 311 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 EDA2RQ9HAV5 297 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 U3KQ87 197 aa8.65□□□□□ -1.03
SH3RF1-205ENST00000511421 TRAV30A0A087WSZ9 112 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 LINC00854A0A1B0GVQ3 168 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 IGLC1P0CG04 106 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 SLC25A4P12235 298 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 SLC25A6P12236 298 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 IL7P13232 177 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 INPP1P49441 399 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 RND2P52198 227 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 UBE2MP61081 183 aaKnown RBP8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 TIGITQ495A1 244 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 NOXA1Q86UR1 476 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 OR1S1Q8NH92 325 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 ST8SIA2Q92186 375 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 RETNQ9HD89 108 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 UBQLN2Q9UHD9 624 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 FLVCR2Q9UPI3 526 aa8.64□□□□□ -1.03
SH3RF1-205ENST00000511421 OR4C46A6NHA9 309 aa8.63□□□□□ -1.03
SH3RF1-205ENST00000511421 C3orf84H3BNL1 204 aa8.63□□□□□ -1.03
SH3RF1-205ENST00000511421 IFNA10P01566 189 aa8.63□□□□□ -1.03
SH3RF1-205ENST00000511421 OR1S2Q8NGQ3 325 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms