RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 CRISP2P16562 243 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 ADMP35318 185 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 LGALS4P56470 323 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 USF2Q15853 346 aaPredicted RBP8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 C2orf83Q53S99 150 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 TMEM200BQ69YZ2 307 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 OR5B3Q8NH48 314 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 OSTCQ9NRP0 149 aa8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 AURKAIP1Q9NWT8 199 aaPredicted RBP8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 RPUSD1Q9UJJ7 312 aaKnown RBP8.95□□□□□ -0.98
SH3RF1-203ENST00000508685 BAHCC1Q9P281 2608 aa8.94□□□□□ -0.98
SH3RF1-203ENST00000508685 LY6HO94772 140 aa8.94□□□□□ -0.98
SH3RF1-203ENST00000508685 LINC00869P0C866 280 aa8.94□□□□□ -0.98
SH3RF1-203ENST00000508685 GNG4P50150 75 aa8.94□□□□□ -0.98
SH3RF1-203ENST00000508685 OR1L8Q8NGR8 309 aa8.94□□□□□ -0.98
SH3RF1-203ENST00000508685 CACNG8Q8WXS5 425 aa8.94□□□□□ -0.98
SH3RF1-203ENST00000508685 ZNF714Q96N38 554 aa8.94□□□□□ -0.98
SH3RF1-203ENST00000508685 MRPL32Q9BYC8 188 aaKnown RBP8.94□□□□□ -0.98
SH3RF1-203ENST00000508685 BET1LQ9NYM9 111 aa8.94□□□□□ -0.98
SH3RF1-203ENST00000508685 KIR2DL5BA0A0G2JN68 375 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 KIR2DL5BA0A0G2JPC4 375 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 A0A1W2PRE2 83 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 PGPEP1LA6NFU8 196 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 M0QZK8 103 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 NDUFB3O43676 98 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 COL8A2P25067 703 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 TIGITQ495A1 244 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 LRRC10Q5BKY1 277 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 MMD2Q8IY49 270 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 KIR2DL5AQ8N109 375 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 NABP2Q9BQ15 211 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 MRPL18Q9H0U6 180 aaKnown RBP8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 GAL3ST2Q9H3Q3 398 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 SPTAN1Q13813 2472 aaKnown RBP8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 INS-IGF2F8WCM5 200 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 M0R143 59 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 IGFBP2P18065 325 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 GNLYP22749 145 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 MEF2CQ06413 473 aaPredicted RBP8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 SLC25A48Q6ZT89 311 aaKnown RBP8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 TMEM256Q8N2U0 113 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 OR1L6Q8NGR2 347 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 OSR1Q8TAX0 266 aaPredicted RBP8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 MISP3Q96FF7 219 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 UTP20O75691 2785 aaKnown RBP8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 CSMD1Q96PZ7 3565 aa8.93□□□□□ -0.98
SH3RF1-203ENST00000508685 K7EN84 100 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 FCN1O00602 326 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 ISLRO14498 428 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 OR5G3P0C626 314 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 PSG5Q15238 335 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 SLC35D1Q9NTN3 355 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 KAAG1Q9UBP8 84 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 V9GYV3 84 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 ZNF705FA8MVS1 300 aaPredicted RBP8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 ZNF705DP0CH99 300 aaPredicted RBP8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 ZNF705BP0CI00 300 aaPredicted RBP8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 CX3CL1P78423 397 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 ERHP84090 104 aaKnown RBP8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 PRSS8Q16651 343 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 OR10J3Q5JRS4 329 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 SPATA31B1PQ5VZV4 182 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 MIR17HGQ75NE6 70 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 BAGE3Q86Y29 109 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 BAGE2Q86Y30 109 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 OR4A5Q8NH83 315 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 C20orf144Q9BQM9 153 aa8.92□□□□□ -0.98
SH3RF1-203ENST00000508685 TET2Q6N021 2002 aaPredicted RBP8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 LRRK2Q5S007 2527 aa8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 TEX50A0A1B0GTY4 177 aa8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 A0A1W2PPR1 153 aa8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 FOXH1O75593 365 aa8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 IGKV1-16P04430 117 aa8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 C8orf88P0DMB2 117 aa8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 CBLN1P23435 193 aa8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 NUTF2P61970 127 aaKnown RBP8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 RASL11AQ6T310 242 aa8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 OR5AU1Q8NGC0 362 aa8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 HINT2Q9BX68 163 aa8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 POLR3KQ9Y2Y1 108 aaPredicted RBP8.91□□□□□ -0.98
SH3RF1-203ENST00000508685 CRYBG3Q68DQ2 2970 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 A0A1W2PN81 502 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 APOA2P02652 100 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 CT45A6P0DMU7 189 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 CT45A5P0DMU8 189 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 CT45A7P0DMV0 189 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 PPOXP50336 477 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 DLX1P56177 255 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 CD69Q07108 199 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 HLA-DRB5Q30154 266 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 CENPWQ5EE01 88 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 ITLN2Q8WWU7 325 aaPredicted RBP8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 TBX15Q96SF7 602 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 CHRDL1Q9BU40 450 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 CSMD2Q7Z408 3487 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 MALRD1Q5VYJ5 2156 aa8.9□□□□□ -0.98
SH3RF1-203ENST00000508685 USP9XQ93008 2570 aaPredicted RBP8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 SNURFLB1AK76 121 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 SLC17A3O00476 420 aa8.9□□□□□ -0.99
SH3RF1-203ENST00000508685 HLA-DQA1P01909 254 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms