RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 C7orf71A4D174 169 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 EVPLLA8MZ36 301 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 ZNF736B4DX44 427 aaPredicted RBP0.17□□□□□ -2.38
GYPB-209ENST00000508618 SULT1B1O43704 296 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 LYZL6O75951 148 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 HLA-DRB1P01911 266 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 CRYGAP11844 174 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 CD79AP11912 226 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 HIST1H1TP22492 207 aaPredicted RBP0.17□□□□□ -2.38
GYPB-209ENST00000508618 RPS12P25398 132 aaKnown RBP0.17□□□□□ -2.38
GYPB-209ENST00000508618 SNRPD2P62316 118 aaKnown RBP0.17□□□□□ -2.38
GYPB-209ENST00000508618 KRTAP20-1Q3LI63 56 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 UBR4Q5T4S7 5183 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 ALKAL1Q6UXT8 129 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 TRAPPC6BQ86SZ2 158 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 C3orf56Q8N813 242 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 H1FXQ92522 213 aaKnown RBP0.17□□□□□ -2.38
GYPB-209ENST00000508618 BORCS5Q969J3 196 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 IMP4Q96G21 291 aaKnown RBP0.17□□□□□ -2.38
GYPB-209ENST00000508618 TMEM147Q9BVK8 224 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 ACER3Q9NUN7 267 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 USP24Q9UPU5 2620 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 ERGIC3Q9Y282 383 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 SLC35A3Q9Y2D2 325 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 TMEM56-RWDD3S4R434 201 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 KIF13BQ9NQT8 1826 aa0.17□□□□□ -2.38
GYPB-209ENST00000508618 ZFC3H1O60293 1989 aaKnown RBP0.16□□□□□ -2.38
GYPB-209ENST00000508618 PCLOQ9Y6V0 5065 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 TRAV9-1A0A075B6T8 112 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 NCR3O14931 201 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 YPEL3P61236 119 aaPredicted RBP0.16□□□□□ -2.38
GYPB-209ENST00000508618 CNBPP62633 177 aaKnown RBP0.16□□□□□ -2.38
GYPB-209ENST00000508618 OR2F1Q13607 317 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 LPCAT4Q643R3 524 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 LCA10Q71F78 164 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 CLVS1Q8IUQ0 354 aaPredicted RBP0.16□□□□□ -2.38
GYPB-209ENST00000508618 PTH2Q96A98 100 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 TSPAN32Q96QS1 320 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 MRPS26Q9BYN8 205 aaKnown RBP0.16□□□□□ -2.38
GYPB-209ENST00000508618 DCSTAMPQ9H295 470 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 EPDR1Q9UM22 224 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 MUC2Q02817 5179 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 KIAA1109Q2LD37 5005 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 SBF1O95248 1867 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 SNAPC4Q5SXM2 1469 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 UNC79Q9P2D8 2635 aa0.16□□□□□ -2.38
GYPB-209ENST00000508618 MYO3BQ8WXR4 1341 aa0.15□□□□□ -2.38
GYPB-209ENST00000508618 KDM6AO15550 1401 aaPredicted RBP0.15□□□□□ -2.39
GYPB-209ENST00000508618 EXOC1LA0A1B0GW35 172 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 BUB1B-PAK6H3BSN5 160 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 FAAHO00519 579 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 CALB1P05937 261 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 BPIFA4PQ86YQ2 179 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 TMEM86BQ8N661 226 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 PLPP5Q8NEB5 264 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 OR13D1Q8NGV5 346 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 GPR146Q96CH1 333 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 RNF122Q9H9V4 155 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 C14orf132Q9NPU4 83 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 CDC42SE1Q9NRR8 79 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 TP73-AS1Q9UF72 201 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 ATP6V1DQ9Y5K8 247 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 MCM3APO60318 1980 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 EML5Q05BV3 1969 aa0.15□□□□□ -2.39
GYPB-209ENST00000508618 TNRC6AQ8NDV7 1962 aaKnown RBP0.15□□□□□ -2.39
GYPB-209ENST00000508618 E9PCH4 1651 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 TNS3Q68CZ2 1445 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 FRAS1Q86XX4 4008 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 LINC00854A0A1B0GVQ3 168 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 PQLC2LA1A4F0 135 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 J3QRK9 145 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 CETN3O15182 167 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 TPM3P06753 285 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 RBP1P09455 135 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 SMIM10L2AP0DMW4 78 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 SMIM10L2BP0DMW5 78 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 HIST1H1EP10412 219 aaKnown RBP0.14□□□□□ -2.39
GYPB-209ENST00000508618 MGST1P10620 155 aaKnown RBP0.14□□□□□ -2.39
GYPB-209ENST00000508618 S100A4P26447 101 aaKnown RBP0.14□□□□□ -2.39
GYPB-209ENST00000508618 SULT1A1P50225 295 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 TCL1AP56279 114 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 CDC42P60953 191 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 SPCS3P61009 180 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 PSG9Q00887 426 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 CCDC122Q5T0U0 273 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 HIST2H3PS2Q5TEC6 136 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 LINC00575Q6W349 94 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 OR6V1Q8N148 313 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 PATE1Q8WXA2 126 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 DNAJC9Q8WXX5 260 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 C2orf50Q96LR7 162 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 PRRT1Q99946 306 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 SMR3AQ99954 134 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 C11orf68Q9H3H3 251 aaKnown RBP0.14□□□□□ -2.39
GYPB-209ENST00000508618 OSTCQ9NRP0 149 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 DSTQ03001 7570 aaKnown RBP0.14□□□□□ -2.39
GYPB-209ENST00000508618 EML6Q6ZMW3 1958 aa0.14□□□□□ -2.39
GYPB-209ENST00000508618 COL6A3P12111 3177 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 DENND4CQ5VZ89 1909 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms