RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 NXPH3O95157 252 aa15.28■□□□□ 0.04
HDAC4-209ENST00000487617 SULT1A3P0DMM9 295 aa15.28■□□□□ 0.04
HDAC4-209ENST00000487617 SULT1A4P0DMN0 295 aa15.28■□□□□ 0.04
HDAC4-209ENST00000487617 ANXA3P12429 323 aa15.28■□□□□ 0.04
HDAC4-209ENST00000487617 HTR2BP41595 481 aa15.28■□□□□ 0.04
HDAC4-209ENST00000487617 BSXQ3C1V8 233 aa15.28■□□□□ 0.04
HDAC4-209ENST00000487617 TMED4Q7Z7H5 227 aa15.28■□□□□ 0.04
HDAC4-209ENST00000487617 TMEM116Q8NCL8 245 aa15.28■□□□□ 0.04
HDAC4-209ENST00000487617 MUC7Q8TAX7 377 aa15.28■□□□□ 0.04
HDAC4-209ENST00000487617 OR10C1Q96KK4 312 aa15.28■□□□□ 0.04
HDAC4-209ENST00000487617 HUWE1Q7Z6Z7 4374 aaKnown RBP15.27■□□□□ 0.04
HDAC4-209ENST00000487617 IGHV3-49A0A0A0MS15 119 aa15.27■□□□□ 0.04
HDAC4-209ENST00000487617 TRAV14DV4A0A0A6YYC5 116 aa15.27■□□□□ 0.04
HDAC4-209ENST00000487617 TMEM50AO95807 157 aa15.27■□□□□ 0.04
HDAC4-209ENST00000487617 SRPXP78539 464 aa15.27■□□□□ 0.04
HDAC4-209ENST00000487617 MLANAQ16655 118 aa15.27■□□□□ 0.04
HDAC4-209ENST00000487617 LGI3Q8N145 548 aa15.27■□□□□ 0.04
HDAC4-209ENST00000487617 DEDD2Q8WXF8 326 aa15.27■□□□□ 0.04
HDAC4-209ENST00000487617 RHPN1-AS1Q9BWJ2 59 aa15.27■□□□□ 0.04
HDAC4-209ENST00000487617 HIPK2Q9H2X6 1198 aa15.27■□□□□ 0.04
HDAC4-209ENST00000487617 FNDC4Q9H6D8 234 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-209ENST00000487617 RETNQ9HD89 108 aa15.27■□□□□ 0.04
HDAC4-209ENST00000487617 CACFD1Q9UGQ2 172 aa15.27■□□□□ 0.04
HDAC4-209ENST00000487617 A0A0B4J2A0 478 aa15.26■□□□□ 0.03
HDAC4-209ENST00000487617 CHEK1O14757 476 aa15.26■□□□□ 0.03
HDAC4-209ENST00000487617 CCR6P51684 374 aa15.26■□□□□ 0.03
HDAC4-209ENST00000487617 TOMM20LQ6UXN7 152 aa15.26■□□□□ 0.03
HDAC4-209ENST00000487617 ZNF600Q6ZNG1 722 aa15.26■□□□□ 0.03
HDAC4-209ENST00000487617 LYZL2Q7Z4W2 148 aa15.26■□□□□ 0.03
HDAC4-209ENST00000487617 RNF2Q99496 336 aa15.26■□□□□ 0.03
HDAC4-209ENST00000487617 GINS3Q9BRX5 216 aa15.26■□□□□ 0.03
HDAC4-209ENST00000487617 MRPL36Q9P0J6 103 aaKnown RBP15.26■□□□□ 0.03
HDAC4-209ENST00000487617 SHPKQ9UHJ6 478 aa15.26■□□□□ 0.03
HDAC4-209ENST00000487617 RPS10-NUDT3A0A1W2PQS6 291 aa15.25■□□□□ 0.03
HDAC4-209ENST00000487617 CLN5O75503 358 aa15.25■□□□□ 0.03
HDAC4-209ENST00000487617 SMCO1Q147U7 214 aa15.25■□□□□ 0.03
HDAC4-209ENST00000487617 C2orf83Q53S99 150 aa15.25■□□□□ 0.03
HDAC4-209ENST00000487617 TMEM128Q5BJH2 165 aa15.25■□□□□ 0.03
HDAC4-209ENST00000487617 NMSQ5H8A3 153 aa15.25■□□□□ 0.03
HDAC4-209ENST00000487617 SLC24A4Q8NFF2 622 aa15.25■□□□□ 0.03
HDAC4-209ENST00000487617 OR4X1Q8NH49 305 aa15.25■□□□□ 0.03
HDAC4-209ENST00000487617 SLC25A21Q9BQT8 299 aaPredicted RBP15.25■□□□□ 0.03
HDAC4-209ENST00000487617 SRRQ9GZT4 340 aa15.25■□□□□ 0.03
HDAC4-209ENST00000487617 UBQLN2Q9UHD9 624 aa15.25■□□□□ 0.03
HDAC4-209ENST00000487617 PUS1Q9Y606 427 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDAC4-209ENST00000487617 IGHV3OR16-13A0A075B7E8 117 aa15.24■□□□□ 0.03
HDAC4-209ENST00000487617 IGHV3-74A0A0B4J1X5 117 aa15.24■□□□□ 0.03
HDAC4-209ENST00000487617 OR4C46A6NHA9 309 aa15.24■□□□□ 0.03
HDAC4-209ENST00000487617 SCGB2A1O75556 95 aa15.24■□□□□ 0.03
HDAC4-209ENST00000487617 GGTLC1Q9BX51 225 aa15.24■□□□□ 0.03
HDAC4-209ENST00000487617 LOC102724200A0A096LPH7 203 aaPredicted RBP15.23■□□□□ 0.03
HDAC4-209ENST00000487617 PIGBOS1A0A0B4J2F0 54 aa15.23■□□□□ 0.03
HDAC4-209ENST00000487617 VAMP1P23763 118 aa15.23■□□□□ 0.03
HDAC4-209ENST00000487617 BMI1P35226 326 aa15.23■□□□□ 0.03
HDAC4-209ENST00000487617 INPP1P49441 399 aa15.23■□□□□ 0.03
HDAC4-209ENST00000487617 TNFRSF9Q07011 255 aa15.23■□□□□ 0.03
HDAC4-209ENST00000487617 RNASEH2CQ8TDP1 164 aaKnown RBP15.23■□□□□ 0.03
HDAC4-209ENST00000487617 FAM110AQ9BQ89 295 aa15.23■□□□□ 0.03
HDAC4-209ENST00000487617 ZFAND3Q9H8U3 227 aa15.23■□□□□ 0.03
HDAC4-209ENST00000487617 EDA2RQ9HAV5 297 aa15.23■□□□□ 0.03
HDAC4-209ENST00000487617 A0A1B0GU03 582 aa15.22■□□□□ 0.03
HDAC4-209ENST00000487617 LYL1P12980 280 aa15.22■□□□□ 0.03
HDAC4-209ENST00000487617 NPY1RP25929 384 aa15.22■□□□□ 0.03
HDAC4-209ENST00000487617 NOXA1Q86UR1 476 aa15.22■□□□□ 0.03
HDAC4-209ENST00000487617 HSPB7Q9UBY9 170 aa15.22■□□□□ 0.03
HDAC4-209ENST00000487617 IGKV3-7A0A075B6H7 116 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 TRAV30A0A087WSZ9 112 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 IFNA10P01566 189 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 TFPI2P48307 235 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 ODF3L2Q3SX64 289 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 TIGITQ495A1 244 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 TRIQKQ629K1 86 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 OR1S1Q8NH92 325 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 DTD1Q8TEA8 209 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 TMEM170AQ8WVE7 144 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 ST8SIA2Q92186 375 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 RBKSQ9H477 322 aa15.21■□□□□ 0.03
HDAC4-209ENST00000487617 DUXBA0A1W2PPF3 345 aa15.2■□□□□ 0.02
HDAC4-209ENST00000487617 APOHP02749 345 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-209ENST00000487617 SLC25A4P12235 298 aa15.2■□□□□ 0.02
HDAC4-209ENST00000487617 RND2P52198 227 aa15.2■□□□□ 0.02
HDAC4-209ENST00000487617 RBMS2Q15434 407 aaKnown RBP15.2■□□□□ 0.02
HDAC4-209ENST00000487617 BAK1Q16611 211 aa15.2■□□□□ 0.02
HDAC4-209ENST00000487617 CASC10Q5T4H9 136 aa15.2■□□□□ 0.02
HDAC4-209ENST00000487617 FAM90A2PQ658T7 463 aa15.2■□□□□ 0.02
HDAC4-209ENST00000487617 PRSS54Q6PEW0 395 aa15.2■□□□□ 0.02
HDAC4-209ENST00000487617 TCF24Q7RTU0 167 aa15.2■□□□□ 0.02
HDAC4-209ENST00000487617 CENPSQ8N2Z9 138 aa15.2■□□□□ 0.02
HDAC4-209ENST00000487617 VSIRQ9H7M9 311 aa15.2■□□□□ 0.02
HDAC4-209ENST00000487617 IGHV3-66A0A0C4DH42 116 aa15.19■□□□□ 0.02
HDAC4-209ENST00000487617 SFT2D2O95562 160 aa15.19■□□□□ 0.02
HDAC4-209ENST00000487617 IGKV1-17P01599 117 aa15.19■□□□□ 0.02
HDAC4-209ENST00000487617 PPP1R1AQ13522 171 aa15.19■□□□□ 0.02
HDAC4-209ENST00000487617 ETFRF1Q6IPR1 90 aa15.19■□□□□ 0.02
HDAC4-209ENST00000487617 GBGT1Q8N5D6 347 aa15.19■□□□□ 0.02
HDAC4-209ENST00000487617 OR1S2Q8NGQ3 325 aa15.19■□□□□ 0.02
HDAC4-209ENST00000487617 NDUFA13Q9P0J0 144 aa15.19■□□□□ 0.02
HDAC4-209ENST00000487617 U3KQ87 197 aa15.19■□□□□ 0.02
HDAC4-209ENST00000487617 NAP1L6A6NFF2 107 aa15.18■□□□□ 0.02
HDAC4-209ENST00000487617 CD5P06127 495 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms