RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 MARC2Q969Z3 335 aa6.21□□□□□ -1.42
ERCC8-205ENST00000477893 PRRT1Q99946 306 aa6.21□□□□□ -1.42
ERCC8-205ENST00000477893 DAZ1Q9NQZ3 744 aaKnown RBP6.21□□□□□ -1.42
ERCC8-205ENST00000477893 MRPL27Q9P0M9 148 aaKnown RBP6.21□□□□□ -1.42
ERCC8-205ENST00000477893 CACNG5Q9UF02 275 aa6.21□□□□□ -1.42
ERCC8-205ENST00000477893 CRYM-AS1A6NIL9 109 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 CEBPZOSA8MTT3 80 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 GSTZ1O43708 216 aaPredicted RBP6.2□□□□□ -1.42
ERCC8-205ENST00000477893 CTSGP08311 255 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 LYL1P12980 280 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 S100A5P33763 92 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 OPRK1P41145 380 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 RELQ04864 619 aaPredicted RBP6.2□□□□□ -1.42
ERCC8-205ENST00000477893 CADM3Q8N126 398 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 ZNF114Q8NC26 417 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 RBPMSQ93062 196 aaKnown RBP6.2□□□□□ -1.42
ERCC8-205ENST00000477893 TMEM230Q96A57 120 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 GPR146Q96CH1 333 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 SCP2D1Q9UJQ7 156 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 STARD9Q9P2P6 4700 aa6.2□□□□□ -1.42
ERCC8-205ENST00000477893 C3orf84H3BNL1 204 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 CDS2O95674 445 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 C8orf88P0DMB2 117 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 RNASE2P10153 161 aaKnown RBP6.19□□□□□ -1.42
ERCC8-205ENST00000477893 SUB1P53999 127 aaKnown RBP eCLIP6.19□□□□□ -1.42
ERCC8-205ENST00000477893 ELLP55199 621 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-205ENST00000477893 DHODHQ02127 395 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 SURF2Q15527 256 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-205ENST00000477893 ANKRD55Q3KP44 614 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 LAMTOR1Q6IAA8 161 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 TOMM5Q8N4H5 51 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 GBGT1Q8N5D6 347 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 TMEM116Q8NCL8 245 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 DUSP18Q8NEJ0 188 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 GLYATL2Q8WU03 294 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 CITED4Q96RK1 184 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 RNF2Q99496 336 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 RHPN1-AS1Q9BWJ2 59 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 NXF2Q9GZY0 626 aaKnown RBP6.19□□□□□ -1.42
ERCC8-205ENST00000477893 HIPK2Q9H2X6 1198 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 HEYLQ9NQ87 328 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-205ENST00000477893 GAR1Q9NY12 217 aaKnown RBP6.19□□□□□ -1.42
ERCC8-205ENST00000477893 MRPL36Q9P0J6 103 aaKnown RBP6.19□□□□□ -1.42
ERCC8-205ENST00000477893 RABL2AQ9UBK7 228 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-205ENST00000477893 RABL2BQ9UNT1 228 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 GPR132Q9UNW8 380 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 V9GYH0 126 aa6.19□□□□□ -1.42
ERCC8-205ENST00000477893 TRAV14DV4A0A0A6YYC5 116 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 TRAV25A0A0B4J276 109 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 IGHV7-4-1A0A0J9YVY3 117 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 LINC00854A0A1B0GVQ3 168 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 C15orf62A8K5M9 175 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 B3GALNT1O75752 331 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 APOHP02749 345 aaPredicted RBP6.18□□□□□ -1.42
ERCC8-205ENST00000477893 RPL35AP18077 110 aaKnown RBP6.18□□□□□ -1.42
ERCC8-205ENST00000477893 FAUP35544 74 aaKnown RBP6.18□□□□□ -1.42
ERCC8-205ENST00000477893 NPBWR1P48145 328 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 SPCS3P61009 180 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 RPL11P62913 178 aaKnown RBP6.18□□□□□ -1.42
ERCC8-205ENST00000477893 KLF9Q13886 244 aaPredicted RBP6.18□□□□□ -1.42
ERCC8-205ENST00000477893 TMEM187Q14656 261 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 MLANAQ16655 118 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 TIGITQ495A1 244 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 CASC10Q5T4H9 136 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 TOMM20LQ6UXN7 152 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 LYZL2Q7Z4W2 148 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 WFDC3Q8IUB2 231 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 TRIM63Q969Q1 353 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 ZNF414Q96IQ9 312 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 TXN2Q99757 166 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 SPAG8Q99932 426 aaPredicted RBP6.18□□□□□ -1.42
ERCC8-205ENST00000477893 SOSTQ9BQB4 213 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 GGTLC1Q9BX51 225 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 KRTAP9-3Q9BYQ3 159 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.18□□□□□ -1.42
ERCC8-205ENST00000477893 SMPXQ9UHP9 88 aa6.18□□□□□ -1.42
ERCC8-205ENST00000477893 PUS1Q9Y606 427 aaKnown RBP eCLIP6.18□□□□□ -1.42
ERCC8-205ENST00000477893 DYNC2H1Q8NCM8 4307 aaKnown RBP6.17□□□□□ -1.42
ERCC8-205ENST00000477893 LOC102724200A0A096LPH7 203 aaPredicted RBP6.17□□□□□ -1.42
ERCC8-205ENST00000477893 A0A1B0GU03 582 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 OR4C46A6NHA9 309 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 CHEK1O14757 476 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 TSPAN4O14817 238 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 SULT1A3P0DMM9 295 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 SULT1A4P0DMN0 295 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 ANXA3P12429 323 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 VAMP1P23763 118 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 INPP1P49441 399 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 AP3S2P59780 193 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 SUPT4H1P63272 117 aaKnown RBP6.17□□□□□ -1.42
ERCC8-205ENST00000477893 ZNF79Q15937 498 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 ODF3L2Q3SX64 289 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 LINC00322Q6ZN03 302 aaPredicted RBP6.17□□□□□ -1.42
ERCC8-205ENST00000477893 TCF24Q7RTU0 167 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 APRG1Q8IVJ8 170 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 FAM219AQ8IW50 185 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 SLC24A4Q8NFF2 622 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 OR1S1Q8NH92 325 aa6.17□□□□□ -1.42
ERCC8-205ENST00000477893 ST8SIA2Q92186 375 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms