RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 C19orf73Q9NVV2 129 aa10.64□□□□□ -0.71
PDE6D-204ENST00000477748 CACFD1Q9UGQ2 172 aa10.64□□□□□ -0.71
PDE6D-204ENST00000477748 SHPKQ9UHJ6 478 aa10.64□□□□□ -0.71
PDE6D-204ENST00000477748 PIGBOS1A0A0B4J2F0 54 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 LINC00854A0A1B0GVQ3 168 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 NAP1L6A6NFF2 107 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 ZNF207O43670 478 aaKnown RBP10.63□□□□□ -0.71
PDE6D-204ENST00000477748 YIF1AO95070 293 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 CD7P09564 240 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 VAMP1P23763 118 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 OPRK1P41145 380 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 HTR2BP41595 481 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 NPBWR1P48145 328 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 CCR6P51684 374 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 SMCO1Q147U7 214 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 PVRIGQ6DKI7 326 aa10.63□□□□□ -0.71
PDE6D-204ENST00000477748 RBPMS2Q6ZRY4 209 aaKnown RBP10.63□□□□□ -0.71
PDE6D-204ENST00000477748 K7EMT4 169 aa10.62□□□□□ -0.71
PDE6D-204ENST00000477748 SCAF4O95104 1147 aaKnown RBP10.62□□□□□ -0.71
PDE6D-204ENST00000477748 RBMS2Q15434 407 aaKnown RBP10.62□□□□□ -0.71
PDE6D-204ENST00000477748 BSXQ3C1V8 233 aa10.62□□□□□ -0.71
PDE6D-204ENST00000477748 NMSQ5H8A3 153 aa10.62□□□□□ -0.71
PDE6D-204ENST00000477748 CENPSQ8N2Z9 138 aa10.62□□□□□ -0.71
PDE6D-204ENST00000477748 CITED4Q96RK1 184 aa10.62□□□□□ -0.71
PDE6D-204ENST00000477748 SDHCQ99643 169 aaPredicted RBP10.62□□□□□ -0.71
PDE6D-204ENST00000477748 HIPK2Q9H2X6 1198 aa10.62□□□□□ -0.71
PDE6D-204ENST00000477748 TRAV25A0A0B4J276 109 aa10.61□□□□□ -0.71
PDE6D-204ENST00000477748 DUXBA0A1W2PPF3 345 aa10.61□□□□□ -0.71
PDE6D-204ENST00000477748 C15orf62A8K5M9 175 aa10.61□□□□□ -0.71
PDE6D-204ENST00000477748 SFT2D2O95562 160 aa10.61□□□□□ -0.71
PDE6D-204ENST00000477748 PPP1R1AQ13522 171 aa10.61□□□□□ -0.71
PDE6D-204ENST00000477748 MLANAQ16655 118 aa10.61□□□□□ -0.71
PDE6D-204ENST00000477748 CASC10Q5T4H9 136 aa10.61□□□□□ -0.71
PDE6D-204ENST00000477748 SLC16A13Q7RTY0 426 aa10.61□□□□□ -0.71
PDE6D-204ENST00000477748 SLC24A4Q8NFF2 622 aa10.61□□□□□ -0.71
PDE6D-204ENST00000477748 OR52B4Q8NGK2 314 aa10.61□□□□□ -0.71
PDE6D-204ENST00000477748 OR1S1Q8NH92 325 aa10.61□□□□□ -0.71
PDE6D-204ENST00000477748 FNDC4Q9H6D8 234 aaPredicted RBP10.61□□□□□ -0.71
PDE6D-204ENST00000477748 A0A1B0GU03 582 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 RPS10-NUDT3A0A1W2PQS6 291 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 CENPXA8MT69 81 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 OR11H12B2RN74 326 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 TMEM50AO95807 157 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 LYL1P12980 280 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 IL7P13232 177 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 TNFRSF9Q07011 255 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 ANKRD55Q3KP44 614 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 C2orf83Q53S99 150 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 LAMTOR1Q6IAA8 161 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 DEFB125Q8N687 156 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 ZNF414Q96IQ9 312 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 SPATA25Q9BR10 227 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 KRTAP17-1Q9BYP8 105 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 MRPL36Q9P0J6 103 aaKnown RBP10.6□□□□□ -0.71
PDE6D-204ENST00000477748 HSPB7Q9UBY9 170 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 SACSQ9NZJ4 4579 aa10.6□□□□□ -0.71
PDE6D-204ENST00000477748 RYR2Q92736 4967 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 CLN5O75503 358 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 SCGB2A1O75556 95 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 NDUFB6O95139 128 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 IFNA10P01566 189 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 NPY1RP25929 384 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 TOMM20LQ6UXN7 152 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 ZNF600Q6ZNG1 722 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 NOXA1Q86UR1 476 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 LRTM2Q8N967 370 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 TMEM116Q8NCL8 245 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 OR4X1Q8NH49 305 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 DTD1Q8TEA8 209 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 OR10C1Q96KK4 312 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 C7orf50Q9BRJ6 194 aaKnown RBP10.59□□□□□ -0.71
PDE6D-204ENST00000477748 WFDC10AQ9H1F0 79 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 RBKSQ9H477 322 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 SMPXQ9UHP9 88 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 STARD9Q9P2P6 4700 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 CSMD3Q7Z407 3707 aa10.59□□□□□ -0.71
PDE6D-204ENST00000477748 IGHV3-49A0A0A0MS15 119 aa10.58□□□□□ -0.72
PDE6D-204ENST00000477748 TRAV14DV4A0A0A6YYC5 116 aa10.58□□□□□ -0.72
PDE6D-204ENST00000477748 IGHV7-4-1A0A0J9YVY3 117 aa10.58□□□□□ -0.72
PDE6D-204ENST00000477748 UBE2MP61081 183 aaKnown RBP10.58□□□□□ -0.72
PDE6D-204ENST00000477748 HAGHQ16775 308 aa10.58□□□□□ -0.72
PDE6D-204ENST00000477748 RNASEH2CQ8TDP1 164 aaKnown RBP10.58□□□□□ -0.72
PDE6D-204ENST00000477748 SPAG8Q99932 426 aaPredicted RBP10.58□□□□□ -0.72
PDE6D-204ENST00000477748 GINS3Q9BRX5 216 aa10.58□□□□□ -0.72
PDE6D-204ENST00000477748 RHPN1-AS1Q9BWJ2 59 aa10.58□□□□□ -0.72
PDE6D-204ENST00000477748 SRD5A3Q9H8P0 318 aa10.58□□□□□ -0.72
PDE6D-204ENST00000477748 PUS1Q9Y606 427 aaKnown RBP eCLIP10.58□□□□□ -0.72
PDE6D-204ENST00000477748 U3KQ87 197 aa10.58□□□□□ -0.72
PDE6D-204ENST00000477748 TENM2Q9NT68 2774 aa10.57□□□□□ -0.72
PDE6D-204ENST00000477748 TRAV30A0A087WSZ9 112 aa10.57□□□□□ -0.72
PDE6D-204ENST00000477748 CHEK1O14757 476 aa10.57□□□□□ -0.72
PDE6D-204ENST00000477748 TSPAN4O14817 238 aa10.57□□□□□ -0.72
PDE6D-204ENST00000477748 HOXB5P09067 269 aa10.57□□□□□ -0.72
PDE6D-204ENST00000477748 SLC25A4P12235 298 aa10.57□□□□□ -0.72
PDE6D-204ENST00000477748 ETFRF1Q6IPR1 90 aa10.57□□□□□ -0.72
PDE6D-204ENST00000477748 TMEM170AQ8WVE7 144 aa10.57□□□□□ -0.72
PDE6D-204ENST00000477748 LYSTQ99698 3801 aa10.57□□□□□ -0.72
PDE6D-204ENST00000477748 FLVCR2Q9UPI3 526 aa10.57□□□□□ -0.72
PDE6D-204ENST00000477748 TMED3Q9Y3Q3 217 aa10.57□□□□□ -0.72
PDE6D-204ENST00000477748 IGHV3OR16-13A0A075B7E8 117 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms