RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 HSPB7Q9UBY9 170 aa7.01□□□□□ -1.29
SMC4-213ENST00000472282 KLK9Q9UKQ9 250 aa7.01□□□□□ -1.29
SMC4-213ENST00000472282 IGHV3-21A0A0B4J1V1 117 aa7□□□□□ -1.29
SMC4-213ENST00000472282 SEC14L6B5MCN3 397 aa7□□□□□ -1.29
SMC4-213ENST00000472282 FAM90A26D6RGX4 464 aa7□□□□□ -1.29
SMC4-213ENST00000472282 LINC01619G3V211 115 aa7□□□□□ -1.29
SMC4-213ENST00000472282 RNASE2P10153 161 aaKnown RBP7□□□□□ -1.29
SMC4-213ENST00000472282 SLURP1P55000 103 aa7□□□□□ -1.29
SMC4-213ENST00000472282 OR1L6Q8NGR2 347 aa7□□□□□ -1.29
SMC4-213ENST00000472282 OR1N2Q8NGR9 330 aa7□□□□□ -1.29
SMC4-213ENST00000472282 DTD1Q8TEA8 209 aa7□□□□□ -1.29
SMC4-213ENST00000472282 EEF1AKMT3Q96AZ1 226 aa7□□□□□ -1.29
SMC4-213ENST00000472282 OR10C1Q96KK4 312 aa7□□□□□ -1.29
SMC4-213ENST00000472282 CCDC140Q96MF4 163 aa7□□□□□ -1.29
SMC4-213ENST00000472282 B9D2Q9BPU9 175 aa7□□□□□ -1.29
SMC4-213ENST00000472282 GPR61Q9BZJ8 451 aa7□□□□□ -1.29
SMC4-213ENST00000472282 THYN1Q9P016 225 aa7□□□□□ -1.29
SMC4-213ENST00000472282 CACFD1Q9UGQ2 172 aa7□□□□□ -1.29
SMC4-213ENST00000472282 LSM4Q9Y4Z0 139 aaKnown RBP7□□□□□ -1.29
SMC4-213ENST00000472282 COL7A1Q02388 2944 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 FAM25EA8MYX2 175 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 K7EIM0 57 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 RGS13O14921 159 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 SCGB1D2O95969 90 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 HSPB1P04792 205 aaKnown RBP6.99□□□□□ -1.29
SMC4-213ENST00000472282 OR8U8P0C7N1 319 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 IAPPP10997 89 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 NKX2-1P43699 371 aaPredicted RBP6.99□□□□□ -1.29
SMC4-213ENST00000472282 CD69Q07108 199 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 IAH1Q2TAA2 248 aaPredicted RBP6.99□□□□□ -1.29
SMC4-213ENST00000472282 BSXQ3C1V8 233 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 C9orf66Q5T8R8 295 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 CLEC19AQ6UXS0 136 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 ZBTB8BQ8NAP8 495 aaPredicted RBP6.99□□□□□ -1.29
SMC4-213ENST00000472282 SLC24A4Q8NFF2 622 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 OR4D5Q8NGN0 318 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 PINX1Q96BK5 328 aaKnown RBP6.99□□□□□ -1.29
SMC4-213ENST00000472282 CXorf58Q96LI9 332 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 MAGT1Q9H0U3 335 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 HIPK2Q9H2X6 1198 aa6.99□□□□□ -1.29
SMC4-213ENST00000472282 PEF1Q9UBV8 284 aaKnown RBP6.99□□□□□ -1.29
SMC4-213ENST00000472282 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.98□□□□□ -1.29
SMC4-213ENST00000472282 TRBV7-1A0A0A6YYK4 115 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 C5orf51A6NDU8 294 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 SNRPGP15A8MWD9 76 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 PPP5D1E7EU14 171 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 I3L2K1 104 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 BMPR1BO00238 502 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 WRBO00258 174 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 SYNGR2O43760 224 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 MED6O75586 246 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 MT-CO2P00403 227 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 IGHV3-48P01763 117 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 NPY1RP25929 384 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 GPR183P32249 361 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 HTR2BP41595 481 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 SUB1P53999 127 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMC4-213ENST00000472282 POLR2GP62487 172 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMC4-213ENST00000472282 TATDN3Q17R31 274 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 RGS21Q2M5E4 152 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 GSG1LQ6UXU4 331 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 ZNF502Q8TBZ5 544 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 VN1R17PQ8TDU5 208 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 SCARB1Q8WTV0 552 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 TMEM170AQ8WVE7 144 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 DCUN1D4Q92564 292 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 RANGRFQ9HD47 186 aaPredicted RBP6.98□□□□□ -1.29
SMC4-213ENST00000472282 GSKIPQ9P0R6 139 aa6.98□□□□□ -1.29
SMC4-213ENST00000472282 SORL1Q92673 2214 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 C7orf66A4D0T2 115 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 CORTO00230 105 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 GOSR2O14653 212 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 SSSCA1O60232 199 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 IFNA10P01566 189 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 ZP3P21754 424 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 ARL3P36405 182 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 OPRK1P41145 380 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 C2orf83Q53S99 150 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 FAM209BQ5JX69 171 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 PVRIGQ6DKI7 326 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 UBAC2Q8NBM4 344 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 DLX4Q92988 240 aaPredicted RBP6.97□□□□□ -1.29
SMC4-213ENST00000472282 ASCL2Q99929 193 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 FNDC4Q9H6D8 234 aaPredicted RBP6.97□□□□□ -1.29
SMC4-213ENST00000472282 ZC4H2Q9NQZ6 224 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 C21orf62Q9NYP8 219 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 ALG5Q9Y673 324 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 U3KQ87 197 aa6.97□□□□□ -1.29
SMC4-213ENST00000472282 HUWE1Q7Z6Z7 4374 aaKnown RBP6.97□□□□□ -1.29
SMC4-213ENST00000472282 KMT2CQ8NEZ4 4911 aaKnown RBP6.96□□□□□ -1.3
SMC4-213ENST00000472282 OR2T8A6NH00 312 aa6.96□□□□□ -1.3
SMC4-213ENST00000472282 C15orf62A8K5M9 175 aa6.96□□□□□ -1.3
SMC4-213ENST00000472282 H3BP45 60 aa6.96□□□□□ -1.3
SMC4-213ENST00000472282 OVOL1O14753 267 aa6.96□□□□□ -1.3
SMC4-213ENST00000472282 TGOLN2O43493 480 aa6.96□□□□□ -1.3
SMC4-213ENST00000472282 SSNA1O43805 119 aa6.96□□□□□ -1.3
SMC4-213ENST00000472282 SIX6O95475 246 aa6.96□□□□□ -1.3
SMC4-213ENST00000472282 MBPP02686 304 aaPredicted RBP6.96□□□□□ -1.3
SMC4-213ENST00000472282 CLEC3BP05452 202 aa6.96□□□□□ -1.3
SMC4-213ENST00000472282 MFAP4P55083 255 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms