RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 RHEBQ15382 184 aa0.55□□□□□ -2.32
MDM2-216ENST00000471946 KCNJ8Q15842 424 aa0.55□□□□□ -2.32
MDM2-216ENST00000471946 RNASE10Q5GAN6 216 aaKnown RBP0.55□□□□□ -2.32
MDM2-216ENST00000471946 DPPA3Q6W0C5 159 aa0.55□□□□□ -2.32
MDM2-216ENST00000471946 Q8N814 137 aa0.55□□□□□ -2.32
MDM2-216ENST00000471946 LINC00526Q96FQ7 95 aa0.55□□□□□ -2.32
MDM2-216ENST00000471946 MRPS26Q9BYN8 205 aaKnown RBP0.55□□□□□ -2.32
MDM2-216ENST00000471946 COMMD5Q9GZQ3 224 aa0.55□□□□□ -2.32
MDM2-216ENST00000471946 GUCA1BQ9UMX6 200 aa0.55□□□□□ -2.32
MDM2-216ENST00000471946 CNTRLQ7Z7A1 2325 aa0.55□□□□□ -2.32
MDM2-216ENST00000471946 TRBV6-8A0A0A6YYG3 113 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 A0A0D9SG52 128 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 EXOC1LA0A1B0GW35 172 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 FAAHO00519 579 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 HIST1H1EP10412 219 aaKnown RBP0.54□□□□□ -2.32
MDM2-216ENST00000471946 MGST1P10620 155 aaKnown RBP0.54□□□□□ -2.32
MDM2-216ENST00000471946 CD79AP11912 226 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 HIST1H1TP22492 207 aaPredicted RBP0.54□□□□□ -2.32
MDM2-216ENST00000471946 RPS20P60866 119 aaKnown RBP0.54□□□□□ -2.32
MDM2-216ENST00000471946 CDC42P60953 191 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 RHOGP84095 191 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 OR2F1Q13607 317 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 KRTAP19-3Q7Z4W3 81 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 HIST3H2BBQ8N257 126 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 DDI1Q8WTU0 396 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 TOMM6Q96B49 74 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 PPP1R2P1Q96PQ5 205 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 SLC39A9Q9NUM3 307 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 NUP155O75694 1391 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 NEO1Q92859 1461 aa0.54□□□□□ -2.32
MDM2-216ENST00000471946 PQLC2LA1A4F0 135 aa0.53□□□□□ -2.32
MDM2-216ENST00000471946 HIST3H3Q16695 136 aa0.53□□□□□ -2.32
MDM2-216ENST00000471946 ANKRD29Q8N6D5 301 aa0.53□□□□□ -2.32
MDM2-216ENST00000471946 TSPAN32Q96QS1 320 aa0.53□□□□□ -2.32
MDM2-216ENST00000471946 NIPSNAP1Q9BPW8 284 aa0.53□□□□□ -2.32
MDM2-216ENST00000471946 TAS2R4Q9NYW5 299 aa0.53□□□□□ -2.32
MDM2-216ENST00000471946 TMEM56-RWDD3S4R434 201 aa0.53□□□□□ -2.32
MDM2-216ENST00000471946 MED1Q15648 1581 aaPredicted RBP0.53□□□□□ -2.33
MDM2-216ENST00000471946 KIAA1549Q9HCM3 1950 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 SNRNP200O75643 2136 aaKnown RBP0.52□□□□□ -2.33
MDM2-216ENST00000471946 TRAV9-1A0A075B6T8 112 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.52□□□□□ -2.33
MDM2-216ENST00000471946 TRAV3A0A0B4J244 114 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 LYZL6O75951 148 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 UBL3O95164 117 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 IFNA10P01566 189 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 IFNA5P01569 189 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 BAALC-AS2P0C853 105 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 NKX2-5P52952 324 aaPredicted RBP0.52□□□□□ -2.33
MDM2-216ENST00000471946 GDF5OSQ5U4N7 250 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 SPOPLQ6IQ16 392 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 C20orf196Q8IYI0 205 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 OR52E6Q96RD3 313 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 MIXL1Q9H2W2 232 aa0.52□□□□□ -2.33
MDM2-216ENST00000471946 GOLGA6L19H0YKK7 550 aa0.51□□□□□ -2.33
MDM2-216ENST00000471946 CHP2O43745 196 aa0.51□□□□□ -2.33
MDM2-216ENST00000471946 OR2B3O76000 313 aa0.51□□□□□ -2.33
MDM2-216ENST00000471946 OR2J2O76002 312 aa0.51□□□□□ -2.33
MDM2-216ENST00000471946 TCL1BO95988 128 aa0.51□□□□□ -2.33
MDM2-216ENST00000471946 SIP14410 1827 aa0.51□□□□□ -2.33
MDM2-216ENST00000471946 PSME3P61289 254 aa0.51□□□□□ -2.33
MDM2-216ENST00000471946 MAGOHP61326 146 aaKnown RBP0.51□□□□□ -2.33
MDM2-216ENST00000471946 OR52R1Q8NGF1 315 aa0.51□□□□□ -2.33
MDM2-216ENST00000471946 SFT2D1Q8WV19 159 aa0.51□□□□□ -2.33
MDM2-216ENST00000471946 GPR146Q96CH1 333 aa0.51□□□□□ -2.33
MDM2-216ENST00000471946 PHRF1Q9P1Y6 1649 aaKnown RBP0.51□□□□□ -2.33
MDM2-216ENST00000471946 ARHGEF28Q8N1W1 1705 aaKnown RBP0.5□□□□□ -2.33
MDM2-216ENST00000471946 COL1A1P02452 1464 aaPredicted RBP0.5□□□□□ -2.33
MDM2-216ENST00000471946 ROBO3Q96MS0 1386 aa0.5□□□□□ -2.33
MDM2-216ENST00000471946 TRAV12-1A0A0B4J245 112 aa0.5□□□□□ -2.33
MDM2-216ENST00000471946 M0R2N4 97 aa0.5□□□□□ -2.33
MDM2-216ENST00000471946 SULT1B1O43704 296 aa0.5□□□□□ -2.33
MDM2-216ENST00000471946 CRYZL1O95825 349 aa0.5□□□□□ -2.33
MDM2-216ENST00000471946 SULT1A1P50225 295 aa0.5□□□□□ -2.33
MDM2-216ENST00000471946 DEFB113Q30KQ7 82 aa0.5□□□□□ -2.33
MDM2-216ENST00000471946 HEATR1Q9H583 2144 aaKnown RBP0.5□□□□□ -2.33
MDM2-216ENST00000471946 CHD3Q12873 2000 aaKnown RBP0.49□□□□□ -2.33
MDM2-216ENST00000471946 INE1O15225 51 aa0.49□□□□□ -2.33
MDM2-216ENST00000471946 CNBPP62633 177 aaKnown RBP0.49□□□□□ -2.33
MDM2-216ENST00000471946 ACOT6Q3I5F7 207 aaPredicted RBP0.49□□□□□ -2.33
MDM2-216ENST00000471946 C1orf137Q5JT78 98 aa0.49□□□□□ -2.33
MDM2-216ENST00000471946 Q8N6K4 173 aa0.49□□□□□ -2.33
MDM2-216ENST00000471946 OR10J5Q8NHC4 309 aa0.49□□□□□ -2.33
MDM2-216ENST00000471946 AMELYQ99218 206 aa0.49□□□□□ -2.33
MDM2-216ENST00000471946 OR51V1Q9H2C8 321 aa0.49□□□□□ -2.33
MDM2-216ENST00000471946 CDC42SE1Q9NRR8 79 aa0.49□□□□□ -2.33
MDM2-216ENST00000471946 RASL12Q9NYN1 266 aa0.49□□□□□ -2.33
MDM2-216ENST00000471946 AHNAK2Q8IVF2 5795 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 UBR2Q8IWV8 1755 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 TRAV26-2A0A0B4J265 109 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 FAM236DA0A1B0GTK5 79 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 OR4C46A6NHA9 309 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 PROSCO94903 275 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 AHSA1O95433 338 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 IFNA16P05015 189 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 FAM236CP0DP71 79 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 SPRNQ5BIV9 151 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 OSTCQ9NRP0 149 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 ACER3Q9NUN7 267 aa0.48□□□□□ -2.33
MDM2-216ENST00000471946 MRPL27Q9P0M9 148 aaKnown RBP0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms