RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PLEKHA2Q9HB19 425 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 COMMD9Q9P000 198 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 PRNDQ9UKY0 176 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 GOLT1BQ9Y3E0 138 aa4.85□□□□□ -1.63
HDAC1-204ENST00000471488 MEIS3P1A6NDR6 274 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 SMIM9A6NGZ8 99 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 DBX1A6NMT0 343 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 IFITM5A6NNB3 132 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 H3BMM0 161 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 M0QYG6 137 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 EREGO14944 169 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 RBFOX2O43251 390 aaKnown RBP eCLIP4.84□□□□□ -1.63
HDAC1-204ENST00000471488 SCGB2A1O75556 95 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 IFNA5P01569 189 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 RAB6AP20340 208 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 ERHP84090 104 aaKnown RBP4.84□□□□□ -1.63
HDAC1-204ENST00000471488 RRN3P1Q2M238 152 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 SSX7Q7RTT5 188 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 LYPD1Q8N2G4 141 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 ZBTB34Q8NCN2 500 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 FCAMRQ8WWV6 532 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 SLC35B3Q9H1N7 401 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 S100A14Q9HCY8 104 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 FKBP11Q9NYL4 201 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 LINC00588Q9Y4M8 146 aa4.84□□□□□ -1.63
HDAC1-204ENST00000471488 ZNF705FA8MVS1 300 aaPredicted RBP4.83□□□□□ -1.64
HDAC1-204ENST00000471488 FAM90A26D6RGX4 464 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 FAM229AH3BQW9 127 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 SSX5O60225 188 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 TMEM50AO95807 157 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 PRM2P04554 102 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 ZNF705DP0CH99 300 aaPredicted RBP4.83□□□□□ -1.64
HDAC1-204ENST00000471488 ZNF705BP0CI00 300 aaPredicted RBP4.83□□□□□ -1.64
HDAC1-204ENST00000471488 RAB3BP20337 219 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 OPRK1P41145 380 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 TRAM1Q15629 374 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 POU2AF1Q16633 256 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 TIGITQ495A1 244 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 OGFRL1Q5TC84 451 aaPredicted RBP4.83□□□□□ -1.64
HDAC1-204ENST00000471488 GDF5OSQ5U4N7 250 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 ZNF705AQ6ZN79 300 aaPredicted RBP4.83□□□□□ -1.64
HDAC1-204ENST00000471488 H2BFWTQ7Z2G1 175 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 SLC35G3Q8N808 338 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 COQ8AQ8NI60 647 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 LGALS14Q8TCE9 139 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 TSC22D3Q99576 134 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 Q9H8V8 135 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 ZNF586Q9NXT0 402 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 SCN3BQ9NY72 215 aa4.83□□□□□ -1.64
HDAC1-204ENST00000471488 TRAV18A0A075B6X5 111 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 ZNF705GA8MUZ8 300 aaPredicted RBP4.82□□□□□ -1.64
HDAC1-204ENST00000471488 HNRNPCP07910 306 aaKnown RBP eCLIP4.82□□□□□ -1.64
HDAC1-204ENST00000471488 HTN1P15515 57 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 F2RP25116 425 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 PSMA1P25786 263 aaKnown RBP4.82□□□□□ -1.64
HDAC1-204ENST00000471488 CRYBB3P26998 211 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 GNRHRP30968 328 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 HOXA1P49639 335 aaPredicted RBP4.82□□□□□ -1.64
HDAC1-204ENST00000471488 AP2S1P53680 142 aaPredicted RBP4.82□□□□□ -1.64
HDAC1-204ENST00000471488 OR5I1Q13606 314 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 FCN2Q15485 313 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 MLANAQ16655 118 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 PHLDA2Q53GA4 152 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 TTC32Q5I0X7 151 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 LAIR2Q6ISS4 152 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 Q6ZSN1 163 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 GLMPQ8WWB7 406 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 C17orf77Q96MU5 243 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 NEU1Q99519 415 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 PDCD10Q9BUL8 212 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 ENY2Q9NPA8 101 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 ACOT13Q9NPJ3 140 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 IFT46Q9NQC8 304 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 EHFQ9NZC4 300 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 DAPK2Q9UIK4 370 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 RABL2BQ9UNT1 228 aa4.82□□□□□ -1.64
HDAC1-204ENST00000471488 LSM2Q9Y333 95 aaKnown RBP4.82□□□□□ -1.64
HDAC1-204ENST00000471488 SRRM2Q9UQ35 2752 aaKnown RBP4.82□□□□□ -1.64
HDAC1-204ENST00000471488 A0A0J9YY99 117 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 PGLYRP1O75594 196 aaPredicted RBP4.81□□□□□ -1.64
HDAC1-204ENST00000471488 IL4P05112 153 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 HLA-DRB4P13762 266 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 CBX5P45973 191 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 RORCP51449 518 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 SUB1P53999 127 aaKnown RBP eCLIP4.81□□□□□ -1.64
HDAC1-204ENST00000471488 XGP55808 180 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 PRCDQ00LT1 54 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 USF2Q15853 346 aaPredicted RBP4.81□□□□□ -1.64
HDAC1-204ENST00000471488 IZUMO4Q1ZYL8 232 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 KCTD21Q4G0X4 260 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 C22orf42Q6IC83 251 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 EBLN2Q6P2I7 272 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 C16orf54Q6UWD8 224 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 SIGLEC15Q6ZMC9 328 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 CMTM1Q8IZ96 169 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 SYT8Q8NBV8 401 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 OR4C16Q8NGL9 310 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 OR6F1Q8NGZ6 308 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 Q8WTZ3 238 aa4.81□□□□□ -1.64
HDAC1-204ENST00000471488 RNF141Q8WVD5 230 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms