RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 DPF1Q92782 380 aa12.32□□□□□ -0.44
GPC1-207ENST00000466624 BSCL2Q96G97 398 aaPredicted RBP12.32□□□□□ -0.44
GPC1-207ENST00000466624 ZNF436Q9C0F3 470 aaPredicted RBP12.32□□□□□ -0.44
GPC1-207ENST00000466624 IGHV3-21A0A0B4J1V1 117 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 PRSS46E5RG02 174 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 F8W735 103 aaPredicted RBP12.31□□□□□ -0.44
GPC1-207ENST00000466624 H3BP45 60 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 BMPR1BO00238 502 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 SCAF4O95104 1147 aaKnown RBP12.31□□□□□ -0.44
GPC1-207ENST00000466624 TRBV12-3P01733 135 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 IGHV3-23P01764 117 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 CLEC3BP05452 202 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 GIPP09681 153 aaPredicted RBP12.31□□□□□ -0.44
GPC1-207ENST00000466624 ARL3P36405 182 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 GPX4P36969 197 aaPredicted RBP12.31□□□□□ -0.44
GPC1-207ENST00000466624 NPBWR1P48145 328 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 SPSB3Q6PJ21 355 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 LINC00482Q8N8I6 264 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 OR4X1Q8NH49 305 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 S4R3C0 116 aa12.31□□□□□ -0.44
GPC1-207ENST00000466624 PMS2P5A8MQ11 134 aa12.3□□□□□ -0.44
GPC1-207ENST00000466624 E5RGE8 158 aa12.3□□□□□ -0.44
GPC1-207ENST00000466624 TGOLN2O43493 480 aa12.3□□□□□ -0.44
GPC1-207ENST00000466624 GGCTO75223 188 aaKnown RBP12.3□□□□□ -0.44
GPC1-207ENST00000466624 MPC2O95563 127 aa12.3□□□□□ -0.44
GPC1-207ENST00000466624 GPR183P32249 361 aa12.3□□□□□ -0.44
GPC1-207ENST00000466624 Q56UQ5 140 aa12.3□□□□□ -0.44
GPC1-207ENST00000466624 ACSM6Q6P461 480 aa12.3□□□□□ -0.44
GPC1-207ENST00000466624 SLC16A13Q7RTY0 426 aa12.3□□□□□ -0.44
GPC1-207ENST00000466624 TMEM116Q8NCL8 245 aa12.3□□□□□ -0.44
GPC1-207ENST00000466624 WDR89Q96FK6 387 aaPredicted RBP12.3□□□□□ -0.44
GPC1-207ENST00000466624 DUX3Q96PT4 197 aa12.3□□□□□ -0.44
GPC1-207ENST00000466624 LYRM2Q9NU23 88 aaPredicted RBP12.3□□□□□ -0.44
GPC1-207ENST00000466624 PAIP2BQ9ULR5 123 aaKnown RBP12.3□□□□□ -0.44
GPC1-207ENST00000466624 TRRAPQ9Y4A5 3859 aa12.3□□□□□ -0.44
GPC1-207ENST00000466624 CLN5O75503 358 aa12.29□□□□□ -0.44
GPC1-207ENST00000466624 HOXD3P31249 432 aaPredicted RBP12.29□□□□□ -0.44
GPC1-207ENST00000466624 RPEL1Q2QD12 228 aa12.29□□□□□ -0.44
GPC1-207ENST00000466624 LRRC37A5PQ49AS3 106 aa12.29□□□□□ -0.44
GPC1-207ENST00000466624 PRSS54Q6PEW0 395 aa12.29□□□□□ -0.44
GPC1-207ENST00000466624 WFDC9Q8NEX5 89 aa12.29□□□□□ -0.44
GPC1-207ENST00000466624 VWFP04275 2813 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 TRAV30A0A087WSZ9 112 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 OR2T8A6NH00 312 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 PPP5D1E7EU14 171 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 H0YIZ8 118 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 GNG7O60262 68 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 SCGB2A1O75556 95 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 CTSGP08311 255 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 LYL1P12980 280 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 P2RY1P47900 373 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 CAV2P51636 162 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 RAP2BP61225 183 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 FGL1Q08830 312 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 MLANAQ16655 118 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 GPHB5Q86YW7 130 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 UBAC2Q8NBM4 344 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 OR10P1Q8NGE3 313 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 OR5AC2Q9NZP5 309 aa12.28□□□□□ -0.44
GPC1-207ENST00000466624 FNDC10F2Z333 226 aa12.27□□□□□ -0.45
GPC1-207ENST00000466624 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.45
GPC1-207ENST00000466624 IGHV3-48P01763 117 aa12.27□□□□□ -0.45
GPC1-207ENST00000466624 METTL15P1P0C7V9 234 aa12.27□□□□□ -0.45
GPC1-207ENST00000466624 BCAP31P51572 246 aa12.27□□□□□ -0.45
GPC1-207ENST00000466624 SLURP1P55000 103 aa12.27□□□□□ -0.45
GPC1-207ENST00000466624 KLF5Q13887 457 aaPredicted RBP12.27□□□□□ -0.45
GPC1-207ENST00000466624 C1QL4Q86Z23 238 aa12.27□□□□□ -0.45
GPC1-207ENST00000466624 DCUN1D4Q92564 292 aa12.27□□□□□ -0.45
GPC1-207ENST00000466624 SLC35E1Q96K37 410 aa12.27□□□□□ -0.45
GPC1-207ENST00000466624 RNF126Q9BV68 326 aa12.27□□□□□ -0.45
GPC1-207ENST00000466624 GGACTQ9BVM4 153 aa12.27□□□□□ -0.45
GPC1-207ENST00000466624 MRPL36Q9P0J6 103 aaKnown RBP12.27□□□□□ -0.45
GPC1-207ENST00000466624 FAM24AA6NFZ4 105 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 ADMP35318 185 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 SULT1A1P50225 295 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 RND2P52198 227 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 DLK1P80370 383 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 RELQ04864 619 aaPredicted RBP12.26□□□□□ -0.45
GPC1-207ENST00000466624 GAMTQ14353 236 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 OR8G2PQ6IF36 304 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 TREML4Q6UXN2 200 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 STX12Q86Y82 276 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 TMEM252Q8N6L7 170 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 THAP6Q8TBB0 222 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 DLX4Q92988 240 aaPredicted RBP12.26□□□□□ -0.45
GPC1-207ENST00000466624 CHRDL1Q9BU40 450 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 SLC25A31Q9H0C2 315 aa12.26□□□□□ -0.45
GPC1-207ENST00000466624 TRAV14DV4A0A0A6YYC5 116 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 LGALS9O00182 355 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 NDUFA4O00483 81 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 OVOL1O14753 267 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 CCNKO75909 580 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 OR2C1O95371 312 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 IGLC1P0CG04 106 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 CD33P20138 364 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 FAM106AQ4KMX7 169 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 ACOT7LQ6ZUV0 252 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 REC114Q7Z4M0 266 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 OR1S2Q8NGQ3 325 aa12.25□□□□□ -0.45
GPC1-207ENST00000466624 CHAC2Q8WUX2 184 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms