RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 PRRT1Q99946 306 aa12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 RABL2AQ9UBK7 228 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 CACNG5Q9UF02 275 aa12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 RSL24D1Q9UHA3 163 aaKnown RBP12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 RABL2BQ9UNT1 228 aa12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 PUS1Q9Y606 427 aaKnown RBP eCLIP12.2□□□□□ -0.46
NCKIPSD-208ENST00000454134 IGHV3-66A0A0C4DH42 116 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 A0A1B0GU03 582 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 FABP12A6NFH5 140 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 CORTO00230 105 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 NXPH3O95157 252 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 OPRK1P41145 380 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 SPCS3P61009 180 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 DHODHQ02127 395 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 ZNF124Q15973 351 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 FAM90A2PQ658T7 463 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 ZNF600Q6ZNG1 722 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 FAM219AQ8IW50 185 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 SOSTQ9BQB4 213 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 GINS3Q9BRX5 216 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 ZFAND3Q9H8U3 227 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 MCUBQ9NWR8 336 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 DYNC2H1Q8NCM8 4307 aaKnown RBP12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 STARD9Q9P2P6 4700 aa12.19□□□□□ -0.46
NCKIPSD-208ENST00000454134 APOC4P55056 127 aa12.18□□□□□ -0.46
NCKIPSD-208ENST00000454134 DEFB135Q30KP9 77 aa12.18□□□□□ -0.46
NCKIPSD-208ENST00000454134 BSXQ3C1V8 233 aa12.18□□□□□ -0.46
NCKIPSD-208ENST00000454134 AARDQ4LEZ3 155 aa12.18□□□□□ -0.46
NCKIPSD-208ENST00000454134 TCF24Q7RTU0 167 aa12.18□□□□□ -0.46
NCKIPSD-208ENST00000454134 LILRB2Q8N423 598 aa12.18□□□□□ -0.46
NCKIPSD-208ENST00000454134 ST8SIA2Q92186 375 aa12.18□□□□□ -0.46
NCKIPSD-208ENST00000454134 TMEM230Q96A57 120 aa12.18□□□□□ -0.46
NCKIPSD-208ENST00000454134 HEYLQ9NQ87 328 aaPredicted RBP12.18□□□□□ -0.46
NCKIPSD-208ENST00000454134 WFDC3Q8IUB2 231 aa12.17□□□□□ -0.46
NCKIPSD-208ENST00000454134 OR52E5Q8NH55 327 aa12.17□□□□□ -0.46
NCKIPSD-208ENST00000454134 IL17DQ8TAD2 202 aa12.17□□□□□ -0.46
NCKIPSD-208ENST00000454134 SCP2D1Q9UJQ7 156 aa12.17□□□□□ -0.46
NCKIPSD-208ENST00000454134 TMEM56-RWDD3S4R434 201 aa12.17□□□□□ -0.46
NCKIPSD-208ENST00000454134 CEBPZOSA8MTT3 80 aa12.16□□□□□ -0.46
NCKIPSD-208ENST00000454134 SPRY2O43597 315 aa12.16□□□□□ -0.46
NCKIPSD-208ENST00000454134 CLN5O75503 358 aa12.16□□□□□ -0.46
NCKIPSD-208ENST00000454134 AKR1C4P17516 323 aa12.16□□□□□ -0.46
NCKIPSD-208ENST00000454134 HTR2BP41595 481 aa12.16□□□□□ -0.46
NCKIPSD-208ENST00000454134 TMEM187Q14656 261 aa12.16□□□□□ -0.46
NCKIPSD-208ENST00000454134 Q6ZWC4 215 aa12.16□□□□□ -0.46
NCKIPSD-208ENST00000454134 OR4X1Q8NH49 305 aa12.16□□□□□ -0.46
NCKIPSD-208ENST00000454134 VSIRQ9H7M9 311 aa12.16□□□□□ -0.46
NCKIPSD-208ENST00000454134 DFFBO76075 338 aa12.15□□□□□ -0.46
NCKIPSD-208ENST00000454134 RPL11P62913 178 aaKnown RBP12.15□□□□□ -0.46
NCKIPSD-208ENST00000454134 TIGITQ495A1 244 aa12.15□□□□□ -0.46
NCKIPSD-208ENST00000454134 STPG3Q8N7X2 389 aa12.15□□□□□ -0.46
NCKIPSD-208ENST00000454134 GALNT14Q96FL9 552 aa12.15□□□□□ -0.46
NCKIPSD-208ENST00000454134 MAP6D1Q9H9H5 199 aa12.15□□□□□ -0.46
NCKIPSD-208ENST00000454134 KCNIP3Q9Y2W7 256 aa12.15□□□□□ -0.46
NCKIPSD-208ENST00000454134 KIR2DL5BA0A0G2JN68 375 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 KIR2DL5BA0A0G2JPC4 375 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 A0A0J9YWU9 116 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 CCDC160A6NGH7 325 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 UBE2CO00762 179 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 IGKV1-17P01599 117 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 SULT1A3P0DMM9 295 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 SULT1A4P0DMN0 295 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 BMI1P35226 326 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 SUPT4H1P63272 117 aaKnown RBP12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 PAFAH1B2P68402 229 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 EWSR1Q01844 656 aaKnown RBP eCLIP12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 PYDC2Q56P42 97 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 KIR2DL5AQ8N109 375 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 SLC24A4Q8NFF2 622 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 KIR2DL5BQ8NHK3 375 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 TMEM170AQ8WVE7 144 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 SCGB3A2Q96PL1 93 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 MS4A6AQ9H2W1 248 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 TP53TG1Q9Y2A0 90 aa12.14□□□□□ -0.47
NCKIPSD-208ENST00000454134 RPS10-NUDT3A0A1W2PQS6 291 aa12.13□□□□□ -0.47
NCKIPSD-208ENST00000454134 NPPCP23582 126 aa12.13□□□□□ -0.47
NCKIPSD-208ENST00000454134 RND2P52198 227 aa12.13□□□□□ -0.47
NCKIPSD-208ENST00000454134 KLF9Q13886 244 aaPredicted RBP12.13□□□□□ -0.47
NCKIPSD-208ENST00000454134 C2orf83Q53S99 150 aa12.13□□□□□ -0.47
NCKIPSD-208ENST00000454134 LYZL2Q7Z4W2 148 aa12.13□□□□□ -0.47
NCKIPSD-208ENST00000454134 FAM24BQ8N5W8 94 aa12.13□□□□□ -0.47
NCKIPSD-208ENST00000454134 IL22RA2Q969J5 263 aa12.13□□□□□ -0.47
NCKIPSD-208ENST00000454134 TRIM63Q969Q1 353 aa12.13□□□□□ -0.47
NCKIPSD-208ENST00000454134 SACSQ9NZJ4 4579 aa12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 RYR2Q92736 4967 aa12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 DNASE2O00115 360 aaPredicted RBP12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 CMC4P56277 68 aaPredicted RBP12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 NMSQ5H8A3 153 aa12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 PRSS54Q6PEW0 395 aa12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 TMED4Q7Z7H5 227 aa12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 LYG2Q86SG7 212 aa12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 RNASEH2CQ8TDP1 164 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 RNF183Q96D59 192 aa12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 METTL26Q96S19 204 aa12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 V9GYH0 126 aa12.12□□□□□ -0.47
NCKIPSD-208ENST00000454134 TRAV30A0A087WSZ9 112 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 A0A0B4J2A0 478 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 SCGB2A1O75556 95 aa12.11□□□□□ -0.47
NCKIPSD-208ENST00000454134 CD5P06127 495 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms