RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TSPAN5P62079 268 aa12.95□□□□□ -0.34
CHCHD3-203ENST00000448878 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
CHCHD3-203ENST00000448878 TBC1D26Q86UD7 250 aa12.95□□□□□ -0.34
CHCHD3-203ENST00000448878 CSNK1G2-AS1Q8NCQ2 148 aa12.95□□□□□ -0.34
CHCHD3-203ENST00000448878 SEC22AQ96IW7 307 aa12.95□□□□□ -0.34
CHCHD3-203ENST00000448878 RAB40CQ96S21 281 aa12.95□□□□□ -0.34
CHCHD3-203ENST00000448878 FAT2Q9NYQ8 4349 aa12.95□□□□□ -0.34
CHCHD3-203ENST00000448878 PKHD1P08F94 4074 aa12.94□□□□□ -0.34
CHCHD3-203ENST00000448878 DNAH2Q9P225 4427 aa12.94□□□□□ -0.34
CHCHD3-203ENST00000448878 LOC100506127A0A0U1RQW1 187 aa12.94□□□□□ -0.34
CHCHD3-203ENST00000448878 EIF2B2P49770 351 aaKnown RBP12.94□□□□□ -0.34
CHCHD3-203ENST00000448878 TAS2R46P59540 309 aa12.94□□□□□ -0.34
CHCHD3-203ENST00000448878 SLC35G3Q8N808 338 aa12.94□□□□□ -0.34
CHCHD3-203ENST00000448878 MRGPRFQ96AM1 343 aa12.94□□□□□ -0.34
CHCHD3-203ENST00000448878 S100A16Q96FQ6 103 aaKnown RBP12.94□□□□□ -0.34
CHCHD3-203ENST00000448878 C1QTNF4Q9BXJ3 329 aa12.94□□□□□ -0.34
CHCHD3-203ENST00000448878 HELTA6NFD8 242 aa12.93□□□□□ -0.34
CHCHD3-203ENST00000448878 SCGB2A1O75556 95 aa12.93□□□□□ -0.34
CHCHD3-203ENST00000448878 SUB1P53999 127 aaKnown RBP eCLIP12.93□□□□□ -0.342e-9■■■■□ 26.4
CHCHD3-203ENST00000448878 IZUMO4Q1ZYL8 232 aa12.93□□□□□ -0.34
CHCHD3-203ENST00000448878 LPCAT3Q6P1A2 487 aa12.93□□□□□ -0.34
CHCHD3-203ENST00000448878 IZUMO2Q6UXV1 221 aa12.93□□□□□ -0.34
CHCHD3-203ENST00000448878 SPARTQ8N0X7 666 aa12.93□□□□□ -0.34
CHCHD3-203ENST00000448878 DCANP1Q8TF63 244 aa12.93□□□□□ -0.34
CHCHD3-203ENST00000448878 VCX3BQ9H321 246 aa12.93□□□□□ -0.34
CHCHD3-203ENST00000448878 IGHV3OR16-12A0A075B7B8 117 aa12.92□□□□□ -0.34
CHCHD3-203ENST00000448878 IGKV1-39P01597 117 aa12.92□□□□□ -0.34
CHCHD3-203ENST00000448878 IGKV1D-39P04432 117 aa12.92□□□□□ -0.34
CHCHD3-203ENST00000448878 SPART-AS1P0CW21 52 aa12.92□□□□□ -0.34
CHCHD3-203ENST00000448878 CRYBB3P26998 211 aa12.92□□□□□ -0.34
CHCHD3-203ENST00000448878 HLA-DMAP28067 261 aa12.92□□□□□ -0.34
CHCHD3-203ENST00000448878 OPRK1P41145 380 aa12.92□□□□□ -0.34
CHCHD3-203ENST00000448878 HSPA13P48723 471 aa12.92□□□□□ -0.34
CHCHD3-203ENST00000448878 PDCD10Q9BUL8 212 aa12.92□□□□□ -0.34
CHCHD3-203ENST00000448878 CORTO00230 105 aa12.91□□□□□ -0.34
CHCHD3-203ENST00000448878 CLN5O75503 358 aa12.91□□□□□ -0.34
CHCHD3-203ENST00000448878 HTN3P15516 51 aa12.91□□□□□ -0.34
CHCHD3-203ENST00000448878 HRH1P35367 487 aa12.91□□□□□ -0.34
CHCHD3-203ENST00000448878 GABARAPL2P60520 117 aa12.91□□□□□ -0.34
CHCHD3-203ENST00000448878 MLANAQ16655 118 aa12.91□□□□□ -0.34
CHCHD3-203ENST00000448878 TMEM69Q5SWH9 247 aa12.91□□□□□ -0.34
CHCHD3-203ENST00000448878 Q6ZRM9 215 aa12.91□□□□□ -0.34
CHCHD3-203ENST00000448878 FCGR1BQ92637 280 aa12.91□□□□□ -0.34
CHCHD3-203ENST00000448878 ENY2Q9NPA8 101 aa12.91□□□□□ -0.34
CHCHD3-203ENST00000448878 ABCA13Q86UQ4 5058 aa12.91□□□□□ -0.34
CHCHD3-203ENST00000448878 HOXA1P49639 335 aaPredicted RBP12.9□□□□□ -0.34
CHCHD3-203ENST00000448878 TIGITQ495A1 244 aa12.9□□□□□ -0.34
CHCHD3-203ENST00000448878 KCTD21Q4G0X4 260 aa12.9□□□□□ -0.34
CHCHD3-203ENST00000448878 C1orf134Q5TEV5 83 aa12.9□□□□□ -0.34
CHCHD3-203ENST00000448878 FAM212BQ9NTI7 297 aaPredicted RBP12.9□□□□□ -0.34
CHCHD3-203ENST00000448878 MRPL36Q9P0J6 103 aaKnown RBP12.9□□□□□ -0.34
CHCHD3-203ENST00000448878 DNAH17Q9UFH2 4485 aa12.9□□□□□ -0.34
CHCHD3-203ENST00000448878 PRSS3P35030 304 aa12.89□□□□□ -0.35
CHCHD3-203ENST00000448878 ETV6P41212 452 aa12.89□□□□□ -0.35
CHCHD3-203ENST00000448878 AP2S1P53680 142 aaPredicted RBP12.89□□□□□ -0.35
CHCHD3-203ENST00000448878 TAS2R20P59543 309 aa12.89□□□□□ -0.35
CHCHD3-203ENST00000448878 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
CHCHD3-203ENST00000448878 PKD1P98161 4303 aa12.88□□□□□ -0.35
CHCHD3-203ENST00000448878 IGKV3-20P01619 116 aa12.88□□□□□ -0.35
CHCHD3-203ENST00000448878 AKR1C2P52895 323 aa12.88□□□□□ -0.35
CHCHD3-203ENST00000448878 FXYD7P58549 80 aa12.88□□□□□ -0.35
CHCHD3-203ENST00000448878 Q6ZR54 194 aa12.88□□□□□ -0.35
CHCHD3-203ENST00000448878 LYSMD2Q8IV50 215 aa12.88□□□□□ -0.35
CHCHD3-203ENST00000448878 FNDC4Q9H6D8 234 aaPredicted RBP12.88□□□□□ -0.35
CHCHD3-203ENST00000448878 DYNC1H1Q14204 4646 aaKnown RBP12.88□□□□□ -0.35
CHCHD3-203ENST00000448878 C16orf90A8MZG2 172 aa12.87□□□□□ -0.35
CHCHD3-203ENST00000448878 CD74P04233 296 aa12.87□□□□□ -0.35
CHCHD3-203ENST00000448878 HNRNPCP07910 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHCHD3-203ENST00000448878 RNASE2P10153 161 aaKnown RBP12.87□□□□□ -0.35
CHCHD3-203ENST00000448878 NAT1P18440 290 aa12.87□□□□□ -0.35
CHCHD3-203ENST00000448878 UBE2NLQ5JXB2 153 aa12.87□□□□□ -0.35
CHCHD3-203ENST00000448878 OR4X1Q8NH49 305 aa12.87□□□□□ -0.35
CHCHD3-203ENST00000448878 Q8WTZ3 238 aa12.87□□□□□ -0.35
CHCHD3-203ENST00000448878 ANAPC10Q9UM13 185 aa12.87□□□□□ -0.35
CHCHD3-203ENST00000448878 TRAV30A0A087WSZ9 112 aa12.86□□□□□ -0.35
CHCHD3-203ENST00000448878 TMEM189A5PLL7 270 aa12.86□□□□□ -0.35
CHCHD3-203ENST00000448878 H3BMM0 161 aa12.86□□□□□ -0.35
CHCHD3-203ENST00000448878 PGAM2P15259 253 aa12.86□□□□□ -0.35
CHCHD3-203ENST00000448878 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
CHCHD3-203ENST00000448878 MAPKAPK5-AS1Q8N8E1 139 aa12.86□□□□□ -0.35
CHCHD3-203ENST00000448878 SAMD12Q8N8I0 201 aa12.86□□□□□ -0.35
CHCHD3-203ENST00000448878 FAM210BQ96KR6 192 aa12.86□□□□□ -0.35
CHCHD3-203ENST00000448878 NIPSNAP3BQ9BS92 247 aa12.86□□□□□ -0.35
CHCHD3-203ENST00000448878 FAM90A26D6RGX4 464 aa12.85□□□□□ -0.35
CHCHD3-203ENST00000448878 RNF212Q495C1 297 aa12.85□□□□□ -0.35
CHCHD3-203ENST00000448878 RNASE11Q8TAA1 199 aaKnown RBP12.85□□□□□ -0.35
CHCHD3-203ENST00000448878 GLMPQ8WWB7 406 aa12.85□□□□□ -0.35
CHCHD3-203ENST00000448878 RAB26Q9ULW5 256 aa12.85□□□□□ -0.35
CHCHD3-203ENST00000448878 A0A0B4J293 547 aa12.84□□□□□ -0.35
CHCHD3-203ENST00000448878 SMIM9A6NGZ8 99 aa12.84□□□□□ -0.35
CHCHD3-203ENST00000448878 ATG12O94817 140 aa12.84□□□□□ -0.35
CHCHD3-203ENST00000448878 IGKV1-17P01599 117 aa12.84□□□□□ -0.35
CHCHD3-203ENST00000448878 IGKV1-5P01602 117 aa12.84□□□□□ -0.35
CHCHD3-203ENST00000448878 FAM222AQ5U5X8 452 aa12.84□□□□□ -0.35
CHCHD3-203ENST00000448878 NEU1Q99519 415 aa12.84□□□□□ -0.35
CHCHD3-203ENST00000448878 NRN1Q9NPD7 142 aa12.84□□□□□ -0.35
CHCHD3-203ENST00000448878 TMED3Q9Y3Q3 217 aa12.84□□□□□ -0.35
CHCHD3-203ENST00000448878 RFNGQ9Y644 331 aa12.84□□□□□ -0.35
CHCHD3-203ENST00000448878 DNAH11Q96DT5 4516 aa12.83□□□□□ -0.35
CHCHD3-203ENST00000448878 RPS10-NUDT3A0A1W2PQS6 291 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms