RNA–Protein interactions for RNA: ENST00000428193.6

RPL28-203, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-203ENST00000428193 UBQLN2Q9UHD9 624 aa11.46□□□□□ -0.57
RPL28-203ENST00000428193 IGKV3-7A0A075B6H7 116 aa11.45□□□□□ -0.58
RPL28-203ENST00000428193 IGHV7-4-1A0A0J9YVY3 117 aa11.45□□□□□ -0.58
RPL28-203ENST00000428193 VAMP1P23763 118 aa11.45□□□□□ -0.58
RPL28-203ENST00000428193 HTR2BP41595 481 aa11.45□□□□□ -0.58
RPL28-203ENST00000428193 LGI3Q8N145 548 aa11.45□□□□□ -0.58
RPL28-203ENST00000428193 TMEM116Q8NCL8 245 aa11.45□□□□□ -0.58
RPL28-203ENST00000428193 OR52E5Q8NH55 327 aa11.45□□□□□ -0.58
RPL28-203ENST00000428193 SPAG8Q99932 426 aaPredicted RBP11.45□□□□□ -0.58
RPL28-203ENST00000428193 FAM110AQ9BQ89 295 aa11.45□□□□□ -0.58
RPL28-203ENST00000428193 RHPN1-AS1Q9BWJ2 59 aa11.45□□□□□ -0.58
RPL28-203ENST00000428193 SRRQ9GZT4 340 aa11.45□□□□□ -0.58
RPL28-203ENST00000428193 FNDC4Q9H6D8 234 aaPredicted RBP11.45□□□□□ -0.58
RPL28-203ENST00000428193 MRPL36Q9P0J6 103 aaKnown RBP11.45□□□□□ -0.58
RPL28-203ENST00000428193 SMPXQ9UHP9 88 aa11.45□□□□□ -0.58
RPL28-203ENST00000428193 TRAV14DV4A0A0A6YYC5 116 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 A0A0B4J2A0 478 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 LINC00854A0A1B0GVQ3 168 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 TMEM50AO95807 157 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 TFPI2P48307 235 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 SRPXP78539 464 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 AARDQ4LEZ3 155 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 TRIQKQ629K1 86 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 TOMM20LQ6UXN7 152 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 LINC00322Q6ZN03 302 aaPredicted RBP11.44□□□□□ -0.58
RPL28-203ENST00000428193 ZNF600Q6ZNG1 722 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 SLC24A4Q8NFF2 622 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 RNF2Q99496 336 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 GINS3Q9BRX5 216 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 SHPKQ9UHJ6 478 aa11.44□□□□□ -0.58
RPL28-203ENST00000428193 PUS1Q9Y606 427 aaKnown RBP eCLIP11.44□□□□□ -0.58
RPL28-203ENST00000428193 IGHV3-66A0A0C4DH42 116 aa11.43□□□□□ -0.58
RPL28-203ENST00000428193 CHEK1O14757 476 aa11.43□□□□□ -0.58
RPL28-203ENST00000428193 TSPAN4O14817 238 aa11.43□□□□□ -0.58
RPL28-203ENST00000428193 SMCO1Q147U7 214 aa11.43□□□□□ -0.58
RPL28-203ENST00000428193 BSXQ3C1V8 233 aa11.43□□□□□ -0.58
RPL28-203ENST00000428193 NMSQ5H8A3 153 aa11.43□□□□□ -0.58
RPL28-203ENST00000428193 PVRIGQ6DKI7 326 aa11.43□□□□□ -0.58
RPL28-203ENST00000428193 OR1S1Q8NH92 325 aa11.43□□□□□ -0.58
RPL28-203ENST00000428193 MUC7Q8TAX7 377 aa11.43□□□□□ -0.58
RPL28-203ENST00000428193 HIPK2Q9H2X6 1198 aa11.43□□□□□ -0.58
RPL28-203ENST00000428193 RPS10-NUDT3A0A1W2PQS6 291 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 OR4C46A6NHA9 309 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 CLN5O75503 358 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 NPY1RP25929 384 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 CCR6P51684 374 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 BAK1Q16611 211 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 C2orf83Q53S99 150 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 TMEM128Q5BJH2 165 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 CENPSQ8N2Z9 138 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 GBGT1Q8N5D6 347 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 OR10C1Q96KK4 312 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 CITED4Q96RK1 184 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 SLC25A21Q9BQT8 299 aaPredicted RBP11.42□□□□□ -0.58
RPL28-203ENST00000428193 RBKSQ9H477 322 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 ZFAND3Q9H8U3 227 aa11.42□□□□□ -0.58
RPL28-203ENST00000428193 LOC102724200A0A096LPH7 203 aaPredicted RBP11.41□□□□□ -0.58
RPL28-203ENST00000428193 A0A1B0GU03 582 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 C3orf84H3BNL1 204 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 SCGB2A1O75556 95 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 IFNA10P01566 189 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 APOHP02749 345 aaPredicted RBP11.41□□□□□ -0.58
RPL28-203ENST00000428193 RND2P52198 227 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 TNFRSF9Q07011 255 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 TIGITQ495A1 244 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 TCF24Q7RTU0 167 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 OR4X1Q8NH49 305 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 DTD1Q8TEA8 209 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 ST8SIA2Q92186 375 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 GGTLC1Q9BX51 225 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 TENM3Q9P273 2699 aa11.41□□□□□ -0.58
RPL28-203ENST00000428193 BMI1P35226 326 aa11.4□□□□□ -0.58
RPL28-203ENST00000428193 RPL11P62913 178 aaKnown RBP11.4□□□□□ -0.58
RPL28-203ENST00000428193 PPP1R1AQ13522 171 aa11.4□□□□□ -0.58
RPL28-203ENST00000428193 RBMS2Q15434 407 aaKnown RBP11.4□□□□□ -0.58
RPL28-203ENST00000428193 ZFAND6Q6FIF0 208 aa11.4□□□□□ -0.58
RPL28-203ENST00000428193 WFDC3Q8IUB2 231 aa11.4□□□□□ -0.58
RPL28-203ENST00000428193 TMEM170AQ8WVE7 144 aa11.4□□□□□ -0.58
RPL28-203ENST00000428193 DEDD2Q8WXF8 326 aa11.4□□□□□ -0.58
RPL28-203ENST00000428193 HSPB7Q9UBY9 170 aa11.4□□□□□ -0.58
RPL28-203ENST00000428193 CACFD1Q9UGQ2 172 aa11.4□□□□□ -0.58
RPL28-203ENST00000428193 IAPPP10997 89 aa11.39□□□□□ -0.59
RPL28-203ENST00000428193 ODF3L2Q3SX64 289 aa11.39□□□□□ -0.59
RPL28-203ENST00000428193 PRSS54Q6PEW0 395 aa11.39□□□□□ -0.59
RPL28-203ENST00000428193 RNASEH2CQ8TDP1 164 aaKnown RBP11.39□□□□□ -0.59
RPL28-203ENST00000428193 ACY3Q96HD9 319 aa11.39□□□□□ -0.59
RPL28-203ENST00000428193 EDA2RQ9HAV5 297 aa11.39□□□□□ -0.59
RPL28-203ENST00000428193 PAIP2BQ9ULR5 123 aaKnown RBP11.39□□□□□ -0.59
RPL28-203ENST00000428193 STAB2Q8WWQ8 2551 aa11.38□□□□□ -0.59
RPL28-203ENST00000428193 TRAV30A0A087WSZ9 112 aa11.38□□□□□ -0.59
RPL28-203ENST00000428193 PIGBOS1A0A0B4J2F0 54 aa11.38□□□□□ -0.59
RPL28-203ENST00000428193 DUXBA0A1W2PPF3 345 aa11.38□□□□□ -0.59
RPL28-203ENST00000428193 SFT2D2O95562 160 aa11.38□□□□□ -0.59
RPL28-203ENST00000428193 IGKV1-17P01599 117 aa11.38□□□□□ -0.59
RPL28-203ENST00000428193 IFNA4P05014 189 aa11.38□□□□□ -0.59
RPL28-203ENST00000428193 HOXB5P09067 269 aa11.38□□□□□ -0.59
RPL28-203ENST00000428193 SLC25A4P12235 298 aa11.38□□□□□ -0.59
RPL28-203ENST00000428193 LYL1P12980 280 aa11.38□□□□□ -0.59
RPL28-203ENST00000428193 RPL35AP18077 110 aaKnown RBP11.38□□□□□ -0.59
RPL28-203ENST00000428193 NPPCP23582 126 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms